Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.8e-84 315.8 154 100.0
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 6.8e-36 154.5 110 69.1
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.6e-32 143.3 97 69.1
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 3.5e-32 142.1 99 70.7
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 7.8e-32 141.0 99 67.7
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 3.9e-31 138.7 97 67.0
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 3.9e-31 138.7 99 67.7
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 6.6e-31 137.9 99 66.7
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 6.6e-31 137.9 99 66.7
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 1.5e-30 136.7 95 70.5
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.9e-30 136.3 99 67.7
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 4.3e-30 135.2 99 71.7
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 9.6e-30 134.0 96 67.7
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 1.6e-29 133.3 95 69.5
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 4.7e-29 131.7 98 68.4
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 4.7e-29 131.7 98 69.4
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 8.1e-29 131.0 99 67.7
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.1e-28 130.6 95 67.4
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.4e-28 130.2 98 70.4
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 2.4e-28 129.4 96 66.7
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.1e-28 129.0 96 69.8
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.0e-28 128.6 96 67.7
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.0e-28 128.6 96 67.7
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 4.0e-28 128.6 97 73.2
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.8e-28 127.9 103 67.0
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.8e-28 127.9 103 67.0
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.8e-28 127.9 103 67.0
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 8.9e-28 127.5 96 69.8
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.2e-27 127.1 97 72.2
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.5e-27 126.7 99 66.7
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.5e-27 126.7 99 63.6
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 2.0e-27 126.3 96 66.7
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 2.0e-27 126.3 98 65.3
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 2.0e-27 126.3 95 66.3
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 2.0e-27 126.3 95 65.3
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 3.4e-27 125.6 107 62.6
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 4.4e-27 125.2 96 61.5
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 5.8e-27 124.8 95 65.3
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 7.6e-27 124.4 97 64.9
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 7.6e-27 124.4 97 64.9
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 7.6e-27 124.4 96 67.7
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.6e-27 124.4 95 65.3
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 7.6e-27 124.4 95 65.3
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 7.6e-27 124.4 96 64.6
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.3e-26 123.6 97 64.9
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 1.7e-26 123.2 97 63.9
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.7e-26 123.2 96 65.6
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 1.7e-26 123.2 95 66.3
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 2.2e-26 122.9 97 62.9
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 2.2e-26 122.9 97 62.9
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 2.2e-26 122.9 99 62.6
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 2.2e-26 122.9 103 66.0
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 2.9e-26 122.5 99 61.6
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.9e-26 122.5 95 64.2
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 2.9e-26 122.5 95 63.2
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 2.9e-26 122.5 96 62.5
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 3.8e-26 122.1 97 64.9
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 3.8e-26 122.1 96 61.5
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 3.8e-26 122.1 96 64.6
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 6.4e-26 121.3 96 66.7
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 6.4e-26 121.3 99 61.6
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 6.4e-26 121.3 99 61.6
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 6.4e-26 121.3 103 65.0
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 1.1e-25 120.6 95 61.1
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 1.1e-25 120.6 95 61.1
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 1.1e-25 120.6 96 60.4
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 1.1e-25 120.6 99 62.6
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 1.4e-25 120.2 97 63.9
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 1.9e-25 119.8 101 60.4
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 1.9e-25 119.8 101 60.4
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 1.9e-25 119.8 99 63.6
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 1.9e-25 119.8 97 64.9
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 2.4e-25 119.4 99 61.6
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 2.4e-25 119.4 99 61.6
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 2.4e-25 119.4 99 61.6
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 3.2e-25 119.0 95 64.2
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 3.2e-25 119.0 97 64.9
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 4.2e-25 118.6 93 68.8
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 4.2e-25 118.6 95 61.1
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 4.2e-25 118.6 95 61.1
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 5.4e-25 118.2 95 64.2
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 9.3e-25 117.5 95 60.0
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 9.3e-25 117.5 97 63.9
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.2e-24 117.1 100 67.0
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 4.6e-24 115.2 97 67.0
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 4.6e-24 115.2 98 61.2
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 4.6e-24 115.2 95 60.0
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 6.0e-24 114.8 81 72.8
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 6.0e-24 114.8 101 60.4
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 6.0e-24 114.8 100 61.0
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 1.0e-23 114.0 99 59.6
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 2.3e-23 112.8 102 56.9
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 3.9e-23 112.1 97 66.0
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 3.9e-23 112.1 101 59.4
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 5.1e-23 111.7 100 62.0
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 6.6e-23 111.3 99 62.6
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 6.6e-23 111.3 94 62.8
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.1e-22 110.5 100 59.0
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 1.9e-22 109.8 101 59.4
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.9e-22 109.8 98 62.2
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 2.5e-22 109.4 89 61.8
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 7.3e-22 107.8 102 62.7
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 9.6e-22 107.5 97 59.8
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 9.6e-22 107.5 99 57.6
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 1.6e-21 106.7 63 79.4
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 2.1e-21 106.3 73 71.2
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.8e-21 105.9 98 59.2
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 4.8e-21 105.1 101 55.4
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 1.8e-20 103.2 102 58.8
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 3.1e-20 102.4 102 56.9
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 4.0e-20 102.1 95 56.8
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 5.3e-20 101.7 97 60.8
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 1.2e-19 100.5 61 75.4
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 2.0e-19 99.8 114 49.1
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.7e-18 96.7 95 54.7
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 1.9e-17 93.2 98 54.1
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 5.4e-17 91.7 104 50.0
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 3.5e-16 89.0 71 56.3
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 6.0e-16 88.2 95 48.4
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.1e-14 84.0 61 60.7
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 7.3e-14 81.3 72 62.5
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 2.1e-13 79.7 55 69.1
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 2.8e-13 79.3 87 51.7
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.4e-12 77.0 53 64.2
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 4.9e-10 68.6 48 68.8
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 3.5e-08 62.4 28 89.3
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 4.6e-08 62.0 63 50.8
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 7.9e-08 61.2 94 40.4
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.3e-07 60.5 126 35.7
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 3.9e-07 58.9 63 47.6


User provided reference genes

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