Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 1.7e-96 356.3 222 100.0
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 1.5e-63 246.9 145 91.0
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 1.2e-62 243.8 150 87.3
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 3.6e-62 242.3 147 84.4
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 6.1e-62 241.5 147 85.7
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 8.0e-62 241.1 147 87.8
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 8.0e-62 241.1 147 84.4
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 1.0e-61 240.7 146 87.0
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 2.3e-61 239.6 147 83.7
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 5.2e-61 238.4 150 84.0
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 5.2e-61 238.4 147 85.7
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.2e-60 237.3 150 83.3
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 2.0e-60 236.5 150 83.3
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 2.0e-60 236.5 150 83.3
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 2.0e-60 236.5 150 83.3
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 2.0e-60 236.5 149 83.9
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 2.0e-60 236.5 149 83.9
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 3.4e-60 235.7 149 82.6
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 3.4e-60 235.7 150 82.7
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 3.4e-60 235.7 147 83.7
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.4e-60 235.7 150 83.3
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 4.4e-60 235.3 150 83.3
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 4.4e-60 235.3 150 82.0
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 4.4e-60 235.3 150 82.7
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 7.5e-60 234.6 150 82.7
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 7.5e-60 234.6 150 82.7
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 7.5e-60 234.6 150 82.7
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 7.5e-60 234.6 149 83.2
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 9.8e-60 234.2 149 82.6
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 1.3e-59 233.8 150 80.7
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 1.3e-59 233.8 148 83.1
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.7e-59 233.4 150 82.7
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 1.7e-59 233.4 150 82.7
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 2.8e-59 232.6 150 82.0
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 3.7e-59 232.3 147 84.4
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 3.7e-59 232.3 150 82.0
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 4.9e-59 231.9 148 84.5
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 4.9e-59 231.9 150 82.0
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 8.3e-59 231.1 150 82.0
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 1.1e-58 230.7 146 88.4
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 1.4e-58 230.3 148 83.8
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 1.4e-58 230.3 146 87.7
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 1.4e-58 230.3 148 85.8
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 2.4e-58 229.6 150 82.0
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 5.4e-58 228.4 147 81.6
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 7.0e-58 228.0 150 80.0
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 1.2e-57 227.3 150 80.7
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 1.6e-57 226.9 147 83.0
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.6e-57 226.9 147 81.6
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 1.6e-57 226.9 151 81.5
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 2.0e-57 226.5 145 82.1
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 2.7e-57 226.1 147 81.6
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 2.7e-57 226.1 151 80.1
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 3.5e-57 225.7 148 80.4
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 5.9e-57 224.9 150 79.3
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 5.9e-57 224.9 150 79.3
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 7.7e-57 224.6 148 79.1
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 7.7e-57 224.6 147 81.6
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 1.0e-56 224.2 148 80.4
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 1.0e-56 224.2 148 80.4
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 1.0e-56 224.2 147 80.3
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 1.3e-56 223.8 147 79.6
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 1.7e-56 223.4 147 79.6
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 3.8e-56 222.2 147 80.3
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 5.0e-56 221.9 147 78.9
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 6.6e-56 221.5 148 79.1
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 1.9e-55 219.9 150 79.3
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 3.3e-55 219.2 149 79.2
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 4.3e-55 218.8 147 79.6
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 7.3e-55 218.0 150 78.7
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 1.2e-54 217.2 149 77.2
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 1.2e-54 217.2 134 85.1
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 1.6e-54 216.9 140 81.4
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 2.1e-54 216.5 147 77.6
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 2.8e-54 216.1 145 80.0
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 3.6e-54 215.7 150 78.0
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 4.7e-54 215.3 147 79.6
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 4.7e-54 215.3 147 76.9
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 1.0e-53 214.2 147 76.2
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 4.0e-53 212.2 150 76.0
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 2.6e-52 209.5 148 77.7
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 3.4e-52 209.1 146 78.1
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 5.7e-52 208.4 132 84.1
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 9.8e-52 207.6 139 80.6
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 2.9e-51 206.1 138 79.7
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 6.4e-51 204.9 148 77.7
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 3.2e-50 202.6 141 75.9
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.2e-49 200.7 147 73.5
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.5e-47 193.7 133 76.7
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 8.0e-46 188.0 148 68.2
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 6.8e-45 184.9 118 82.2
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 3.4e-44 182.6 148 68.2
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 3.7e-43 179.1 148 65.5
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 1.2e-38 164.1 107 81.3
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 3.1e-37 159.5 151 64.9
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 7.1e-34 148.3 101 73.3
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 5.2e-29 132.1 82 87.8
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 3.4e-28 129.4 82 86.6
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 2.9e-27 126.3 89 76.4
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 7.3e-23 111.7 75 74.7
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 1.4e-21 107.5 118 47.5
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.8e-21 107.1 73 75.3
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.2e-20 104.4 67 74.6
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 4.9e-19 99.0 102 60.8
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 7.8e-17 91.7 58 82.8
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 3.1e-13 79.7 112 38.4
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 1.9e-10 70.5 48 77.1
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.2e-10 69.7 46 80.4
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 1.6e-09 67.4 103 35.9
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 2.1e-09 67.0 107 41.1
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 2.1e-06 57.0 37 78.4


User provided reference genes

Program Settings