Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03621 Nelumbo nucifera HOM05D000030 ORTHO05D000009 4.7e-24 113.6 54 100.0
Hma1.2p1_0144F.1_g064680 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 9.2e-12 72.8 50 62.0
CSS0005417 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0008208 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0013193 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0020749 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0030850 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0034406 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0036583 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0040089 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0045392 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0047846 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0048834 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.2e-11 72.4 44 70.5
CSS0027790 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.5e-11 70.9 44 68.2
CSS0048268 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.5e-11 70.5 44 68.2
Hma1.2p1_0070F.1_g037500 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.9e-10 67.8 50 58.0
Hma1.2p1_1119F.1_g259210 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.9e-10 67.4 44 61.4
Dinv14390 Davidia involucrata HOM05D000030 ORTHO05D000009 1.5e-09 65.5 44 61.4
Oeu000293.1 Olea europaea HOM05D000030 ORTHO05D000009 3.3e-09 64.3 44 61.4
Oeu036151.1 Olea europaea HOM05D000030 ORTHO05D000009 3.3e-09 64.3 44 61.4
Oeu056385.1 Olea europaea HOM05D000030 ORTHO05D000009 3.3e-09 64.3 44 61.4
Hma1.2p1_0931F.1_g238120 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 5.6e-09 63.5 44 59.1
Oeu057693.1 Olea europaea HOM05D000030 ORTHO05D000009 5.6e-09 63.5 44 61.4
Oeu036139.1 Olea europaea HOM05D000030 ORTHO05D000009 7.3e-09 63.2 44 59.1
Oeu029023.1 Olea europaea HOM05D000030 ORTHO05D000009 1.2e-08 62.4 44 59.1
Oeu018261.1 Olea europaea HOM05D000030 ORTHO05D000009 1.6e-08 62.0 44 59.1
Oeu063300.1 Olea europaea HOM05D000030 ORTHO05D000009 2.8e-08 61.2 44 59.1
Nn2g10365 Nelumbo nucifera HOM05D000030 ORTHO05D000009 3.6e-08 60.8 50 54.0
Oeu020179.1 Olea europaea HOM05D000030 ORTHO05D000009 4.7e-08 60.5 44 56.8
Prupe.2G084000 Prunus persica HOM05D000030 ORTHO05D000009 4.7e-08 60.5 50 54.0
CANSAT25G3796 Cannabis sativa HOM05D000030 ORTHO05D000009 8.0e-08 59.7 50 48.0
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 8.0e-08 59.7 50 48.0
SHI28106 Sapria himalayana HOM05D000030 ORTHO05D000009 4.0e-07 57.4 50 46.0
CANSAT35G1358 Cannabis sativa HOM05D000030 ORTHO05D000023 5.2e-07 57.0 50 48.0
CANSAT64G2844 Cannabis sativa HOM05D000030 ORTHO05D000023 5.2e-07 57.0 50 48.0
MBI13_g21686_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 5.2e-07 57.0 42 59.5
Hma1.2p1_0982F.1_g243880 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.8e-07 56.6 50 50.0
Hma1.2p1_1030F.1_g249810 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.8e-07 56.6 50 50.0
Rhsim03G0115700 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-07 56.2 44 50.0
Rhsim05G0117900 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-07 56.2 44 50.0
Rhsim07G0112400 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.9e-07 56.2 50 54.0
CANSAT01G1043 Cannabis sativa HOM05D000030 ORTHO05D000009 1.2e-06 55.8 50 48.0
CANSAT35G0226 Cannabis sativa HOM05D000030 ORTHO05D000009 1.2e-06 55.8 50 48.0
CANSAT54G2476 Cannabis sativa HOM05D000030 ORTHO05D000009 1.2e-06 55.8 44 56.8
CANSAT80G0739 Cannabis sativa HOM05D000030 ORTHO05D000009 1.2e-06 55.8 50 48.0
Ciclev10024286m.g Citrus clementina HOM05D000030 ORTHO05D000009 1.2e-06 55.8 44 52.3
Oeu063678.1 Olea europaea HOM05D000030 ORTHO05D000031 1.2e-06 55.8 44 56.8
CiPaw.01G174400 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.5e-06 55.5 50 48.0
Nn7g37932 Nelumbo nucifera HOM05D000030 ORTHO05D000009 1.5e-06 55.5 50 46.0
QL02p003957 Quercus lobata HOM05D000030 ORTHO05D000009 1.5e-06 55.5 50 46.0
Rhsim06G0015900 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-06 55.5 51 52.9
Rhsim07G0112500 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-06 55.5 50 54.0
CANSAT01G3066 Cannabis sativa HOM05D000030 ORTHO05D000009 2.0e-06 55.1 50 46.0
CANSAT25G2753 Cannabis sativa HOM05D000030 ORTHO05D000009 2.0e-06 55.1 50 46.0
CANSAT54G0014 Cannabis sativa HOM05D000030 ORTHO05D000009 2.6e-06 54.7 44 56.8
Dinv01288 Davidia involucrata HOM05D000030 ORTHO05D000009 2.6e-06 54.7 44 52.3
QL04p086283 Quercus lobata HOM05D000030 ORTHO05D000009 2.6e-06 54.7 50 46.0
Rhsim13G0135100 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.6e-06 54.7 44 52.3
Atru.chr1.1601 Acer truncatum HOM05D000030 ORTHO05D000009 3.4e-06 54.3 51 51.0
Atru.chr3.2210 Acer truncatum HOM05D000030 ORTHO05D000009 3.4e-06 54.3 44 50.0
Atru.chr3.2216 Acer truncatum HOM05D000030 ORTHO05D000009 3.4e-06 54.3 44 50.0
PSO478G3458 Papaver somniferum HOM05D000030 ORTHO05D000009 3.4e-06 54.3 44 54.5
QL10p051821 Quercus lobata HOM05D000030 ORTHO05D000009 3.4e-06 54.3 50 48.0
Manes.05G008504 Manihot esculenta HOM05D000030 ORTHO05D000009 4.4e-06 53.9 43 55.8
Manes.16G030901 Manihot esculenta HOM05D000030 ORTHO05D000009 4.4e-06 53.9 43 55.8
PSO210G2845 Papaver somniferum HOM05D000030 ORTHO05D000009 4.4e-06 53.9 44 54.5
PSO210G5102 Papaver somniferum HOM05D000030 ORTHO05D000009 4.4e-06 53.9 44 54.5
PSO541G2524 Papaver somniferum HOM05D000030 ORTHO05D000009 4.4e-06 53.9 44 54.5
PSO801G0167 Papaver somniferum HOM05D000030 ORTHO05D000009 4.4e-06 53.9 44 54.5
PSO832G1676 Papaver somniferum HOM05D000030 ORTHO05D000009 4.4e-06 53.9 44 54.5
QL06p028065 Quercus lobata HOM05D000030 ORTHO05D000009 4.4e-06 53.9 44 50.0
Atru.chr9.1038 Acer truncatum HOM05D000030 ORTHO05D000009 5.8e-06 53.5 51 51.0
PSO675G2294 Papaver somniferum HOM05D000030 ORTHO05D000009 5.8e-06 53.5 44 52.3
Sabra17G0124600 Salix brachista HOM05D000030 ORTHO05D000009 5.8e-06 53.5 50 46.0
SGA_v2.0_scaffold38G15081 Striga asiatica HOM05D000030 ORTHO05D000009 5.8e-06 53.5 44 52.3
PSO067G0052 Papaver somniferum HOM05D000030 ORTHO05D000009 7.5e-06 53.1 44 54.5
PSO135G0777 Papaver somniferum HOM05D000030 ORTHO05D000009 7.5e-06 53.1 44 52.3
PSO761G0699 Papaver somniferum HOM05D000030 ORTHO05D000009 7.5e-06 53.1 44 52.3
QL93p1872_0051 Quercus lobata HOM05D000030 ORTHO05D000009 7.5e-06 53.1 50 46.0
Rhsim12G0109500 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.5e-06 53.1 44 47.7
Atru.chr13.2043 Acer truncatum HOM05D000030 ORTHO05D000009 9.8e-06 52.8 44 50.0
Manes.05G090550 Manihot esculenta HOM05D000030 ORTHO05D000009 9.8e-06 52.8 43 55.8
Nn1g06328 Nelumbo nucifera HOM05D000030 ORTHO05D000009 9.8e-06 52.8 49 49.0
Oeu050025.1 Olea europaea HOM05D000030 ORTHO05D000009 9.8e-06 52.8 44 50.0
Rhsim10G0144300 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.8e-06 52.8 44 47.7


User provided reference genes

Program Settings