Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03529 Nelumbo nucifera HOM05D000764 ORTHO05D004953 3.5e-41 171.0 77 100.0
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 9.0e-37 156.4 72 94.4
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 6.0e-33 143.7 73 84.9
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.0e-32 142.9 73 84.9
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 1.0e-32 142.9 73 83.6
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.3e-32 142.5 73 84.9
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 1.8e-32 142.1 72 83.3
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 2.3e-32 141.7 72 79.2
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 2.3e-32 141.7 73 82.2
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 3.0e-32 141.4 73 83.6
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 6.7e-32 140.2 73 83.6
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 1.1e-31 139.4 73 82.2
TAR623G0474 Trochodendron aralioides HOM05D000764 ORTHO05D004953 1.1e-31 139.4 72 81.9
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 2.5e-31 138.3 73 80.8
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 2.5e-31 138.3 73 80.8
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 5.6e-31 137.1 73 82.2
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 9.6e-31 136.3 71 78.9
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 1.3e-30 136.0 73 80.8
Dinv39954 Davidia involucrata HOM05D000764 ORTHO05D004953 1.3e-30 136.0 73 80.8
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 1.6e-30 135.6 73 79.5
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 2.1e-30 135.2 72 80.6
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 2.8e-30 134.8 67 85.1
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 3.7e-30 134.4 73 79.5
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 4.8e-30 134.0 72 75.0
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 6.2e-30 133.7 71 80.3
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 6.2e-30 133.7 71 80.3
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 6.2e-30 133.7 71 80.3
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 8.1e-30 133.3 64 87.5
Cpa.g.sc119.44 Carica papaya HOM05D000764 ORTHO05D004953 1.4e-29 132.5 73 78.1
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 2.4e-29 131.7 73 76.7
COL.COLO4_07280 Corchorus olitorius HOM05D000764 ORTHO05D004953 2.4e-29 131.7 72 76.4
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 2.4e-29 131.7 72 76.4
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 2.4e-29 131.7 71 80.3
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.4e-29 131.7 71 80.3
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.4e-29 131.7 71 80.3
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.4e-29 131.7 71 80.3
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.4e-29 131.7 71 80.3
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 2.4e-29 131.7 73 78.1
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 3.1e-29 131.3 72 77.8
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 4.0e-29 131.0 63 87.3
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 5.3e-29 130.6 72 75.0
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 5.3e-29 130.6 73 75.3
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 6.9e-29 130.2 78 75.6
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 9.0e-29 129.8 72 75.0
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 1.2e-28 129.4 73 78.1
CDE10G0575 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 1.2e-28 129.4 72 75.0
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 1.2e-28 129.4 72 80.6
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 1.5e-28 129.0 87 70.1
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 1.5e-28 129.0 87 70.1
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 1.5e-28 129.0 68 79.4
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 2.0e-28 128.6 71 77.5
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 2.0e-28 128.6 71 77.5
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 2.6e-28 128.3 73 80.8
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 2.6e-28 128.3 71 76.1
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 2.6e-28 128.3 68 77.9
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 3.4e-28 127.9 68 77.9
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 3.4e-28 127.9 68 77.9
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 3.4e-28 127.9 72 77.8
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 3.4e-28 127.9 57 91.2
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 5.8e-28 127.1 68 77.9
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 5.8e-28 127.1 73 79.5
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 5.8e-28 127.1 68 77.9
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 5.8e-28 127.1 73 74.0
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 5.8e-28 127.1 68 76.5
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 5.8e-28 127.1 72 72.2
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 5.8e-28 127.1 72 72.2
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 5.8e-28 127.1 75 76.0
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 7.6e-28 126.7 72 76.4
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 7.6e-28 126.7 68 76.5
Aqoxy368s001 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 1.0e-27 126.3 72 72.2
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 1.0e-27 126.3 72 72.2
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 1.0e-27 126.3 68 76.5
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 1.0e-27 126.3 72 75.0
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.0e-27 126.3 57 91.2
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 1.3e-27 125.9 72 72.2
AUR62019164 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.3e-27 125.9 73 74.0
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.3e-27 125.9 73 74.0
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 1.3e-27 125.9 73 74.0
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 1.7e-27 125.6 69 75.4
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 2.2e-27 125.2 71 74.6
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 2.2e-27 125.2 68 76.5
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 2.9e-27 124.8 73 71.2
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 4.9e-27 124.0 57 89.5
Migut.L00371 Erythranthe guttata HOM05D000764 ORTHO05D004953 4.9e-27 124.0 70 70.0
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 4.9e-27 124.0 70 70.0
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 4.9e-27 124.0 56 94.6
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 4.9e-27 124.0 73 72.6
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 6.5e-27 123.6 71 73.2
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 6.5e-27 123.6 73 72.6
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 6.5e-27 123.6 75 74.7
Actinidia02700 Actinidia chinensis HOM05D000764 ORTHO05D004953 8.4e-27 123.2 57 89.5
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 8.4e-27 123.2 75 72.0
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 8.4e-27 123.2 68 75.0
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 1.4e-26 122.5 73 67.1
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 5.5e-26 120.6 62 83.9
Os05g0447500 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 4.6e-25 117.5 76 69.7
SHI31301 Sapria himalayana HOM05D000764 ORTHO05D004953 7.9e-25 116.7 73 68.5
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 2.3e-24 115.2 71 70.4
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 1.0e-16 89.7 72 55.6
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 1.3e-16 89.4 66 60.6
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 5.7e-15 84.0 46 76.1
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 4.8e-14 80.9 61 50.8
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 6.3e-14 80.5 67 49.3
CBR_g38308 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-09 66.2 62 45.2
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 4.8e-06 54.3 28 60.7


User provided reference genes

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