Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 1.0e-193 679.9 343 100.0
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 2.5e-139 499.2 342 76.3
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 2.2e-135 486.1 349 71.6
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 2.4e-134 482.6 344 71.5
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.1e-131 473.8 351 68.9
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 3.3e-131 472.2 351 68.9
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 4.3e-131 471.9 352 71.3
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 1.3e-130 470.3 351 69.5
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 5.3e-129 464.9 351 68.1
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 1.2e-128 463.8 353 68.8
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 7.6e-128 461.1 352 67.3
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 2.9e-127 459.1 351 68.1
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 7.9e-125 451.1 355 65.4
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 4.3e-123 445.3 308 70.5
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 5.6e-123 444.9 328 69.2
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 4.8e-122 441.8 348 65.2
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 2.4e-121 439.5 348 65.8
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 1.5e-120 436.8 311 68.5
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 1.5e-120 436.8 352 64.8
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 9.9e-120 434.1 348 66.1
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 2.9e-119 432.6 321 66.7
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 3.8e-119 432.2 353 63.2
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 1.1e-118 430.6 313 69.6
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 1.1e-118 430.6 345 64.9
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 1.9e-118 429.9 343 65.3
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 7.1e-118 427.9 310 67.7
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 4.6e-117 425.2 349 64.2
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 3.0e-116 422.5 345 63.2
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 6.7e-116 421.4 343 62.1
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.5e-115 419.5 351 63.2
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 7.4e-115 417.9 343 61.2
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.3e-114 417.2 356 61.0
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.3e-114 417.2 350 62.3
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 2.1e-114 416.4 352 62.8
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 2.1e-114 416.4 352 62.5
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 2.1e-114 416.4 351 62.4
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 1.8e-113 413.3 333 64.3
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 2.4e-113 412.9 355 62.0
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 2.0e-112 409.8 340 61.8
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 2.0e-112 409.8 346 61.6
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 5.8e-112 408.3 351 61.0
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 4.9e-111 405.2 354 59.6
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 6.5e-111 404.8 333 62.2
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.9e-110 403.3 342 60.8
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 2.5e-110 402.9 340 60.6
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 3.2e-110 402.5 307 63.8
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 7.1e-110 401.4 345 60.6
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.6e-109 400.2 308 65.6
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 1.6e-109 400.2 350 60.9
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 2.7e-109 399.4 308 64.0
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 3.5e-109 399.1 307 65.1
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 3.5e-109 399.1 351 59.5
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 7.9e-109 397.9 313 62.9
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.3e-108 397.1 301 64.5
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 3.0e-108 396.0 349 59.3
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 3.0e-108 396.0 356 57.0
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 3.9e-108 395.6 349 57.9
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 8.7e-108 394.4 338 60.9
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 1.5e-107 393.7 308 62.7
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.9e-107 393.3 316 63.3
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 4.3e-107 392.1 351 59.3
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 7.4e-107 391.3 340 59.7
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 9.7e-107 391.0 351 59.3
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 9.7e-107 391.0 351 59.3
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 9.7e-107 391.0 351 59.3
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 9.7e-107 391.0 351 59.3
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 9.7e-107 391.0 315 62.5
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 1.6e-106 390.2 354 57.1
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 1.6e-106 390.2 306 63.7
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 2.8e-106 389.4 351 59.0
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.7e-106 389.0 308 64.0
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.1e-105 387.5 350 56.6
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.8e-105 386.7 344 59.3
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 6.9e-105 384.8 339 59.0
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 1.2e-104 384.0 346 58.7
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 7.7e-104 381.3 344 58.1
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 1.0e-103 380.9 345 58.0
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 1.1e-102 377.5 405 51.9
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.6e-101 373.6 350 55.4
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 6.1e-101 371.7 346 58.4
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 8.8e-100 367.9 349 56.7
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 1.5e-99 367.1 322 57.8
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 3.3e-99 365.9 349 57.0
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 5.7e-99 365.2 339 57.2
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 7.4e-99 364.8 307 60.9
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 1.7e-98 363.6 302 63.6
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 7.7e-96 354.8 349 55.6
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 8.5e-95 351.3 349 55.0
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 6.1e-93 345.1 270 62.2
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 1.4e-92 344.0 342 54.7
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 8.8e-92 341.3 269 62.8
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 2.8e-90 336.3 272 62.9
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 4.8e-90 335.5 267 62.9
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 3.2e-86 322.8 328 53.4
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 3.1e-81 306.2 403 45.9
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 2.1e-77 293.5 320 47.5
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 8.5e-71 271.6 342 45.9
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 5.4e-65 252.3 266 52.3
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 3.5e-56 223.0 362 37.3
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 4.5e-56 222.6 260 45.0
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.3e-55 220.3 187 59.4
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 1.5e-51 207.6 212 55.2
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 4.1e-49 199.5 187 59.4
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 7.8e-48 195.3 133 69.9
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.4e-44 184.5 128 67.2
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 4.0e-44 183.0 128 67.2
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-43 181.4 128 65.6
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 2.6e-43 180.3 132 69.7
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 7.8e-40 168.7 161 57.8
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 5.1e-39 166.0 195 48.2
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 1.1e-30 138.3 239 38.1
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 5.8e-27 125.9 88 68.2
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.1e-25 121.7 88 67.0
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 4.6e-24 116.3 250 30.8
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 8.7e-15 85.5 122 42.6
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 1.5e-14 84.7 159 33.3
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 3.5e-08 63.5 56 57.1
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 1.0e-07 62.0 95 34.7
Glyma.08G216300 Glycine max HOM05D001219 ORTHO05D001017 8.7e-07 58.9 83 32.5
Ciclev10027319m.g Citrus clementina HOM05D001219 ORTHO05D001017 1.1e-06 58.5 141 27.0


User provided reference genes

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