Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.8e-142 509.2 253 100.0
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.0e-105 385.6 238 81.1
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 4.1e-86 322.0 209 78.5
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 1.4e-81 307.0 238 65.1
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 1.1e-80 303.9 214 70.1
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 1.5e-77 293.5 233 62.2
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 2.6e-77 292.7 214 67.3
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 2.6e-77 292.7 214 67.3
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 1.0e-76 290.8 212 67.0
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 1.7e-76 290.0 212 67.0
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 1.7e-76 290.0 244 60.2
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 5.0e-76 288.5 233 63.9
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 3.2e-75 285.8 231 61.5
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 4.2e-75 285.4 212 64.6
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 5.5e-75 285.0 235 60.9
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 9.4e-75 284.3 246 58.5
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 1.4e-73 280.4 232 61.2
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 3.0e-73 279.3 214 62.6
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 8.8e-73 277.7 214 64.0
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 2.0e-72 276.6 232 59.5
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 2.6e-72 276.2 246 58.1
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 4.4e-72 275.4 246 58.1
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 7.4e-72 274.6 242 57.0
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 7.4e-72 274.6 233 59.2
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 2.8e-71 272.7 233 57.9
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 6.3e-71 271.6 212 63.7
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 8.2e-71 271.2 205 63.9
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 8.2e-71 271.2 212 63.7
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 4.1e-70 268.9 212 62.7
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 2.9e-68 262.7 240 57.5
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 1.9e-67 260.0 213 61.5
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 6.1e-66 255.0 214 57.9
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 1.1e-62 244.2 238 53.8
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 7.7e-61 238.0 237 52.3
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 1.7e-60 236.9 236 52.1
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 4.7e-58 228.8 211 55.9
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 2.3e-57 226.5 237 49.4
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 9.8e-56 221.1 239 49.8
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 3.1e-54 216.1 212 54.2
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 3.1e-54 216.1 214 50.9
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 5.9e-53 211.8 140 78.6
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 5.7e-48 195.3 165 57.0
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.8e-48 194.5 129 76.7
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 2.2e-47 193.4 161 68.3
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 6.1e-42 175.3 218 44.0
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 1.2e-34 151.0 107 64.5
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 6.8e-33 145.2 148 53.4
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 2.2e-31 140.2 90 72.2
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 2.4e-30 136.7 114 61.4
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 9.2e-30 134.8 85 76.5
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 2.8e-26 123.2 81 67.9
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 5.8e-24 115.5 102 58.8
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 1.3e-23 114.4 131 48.1
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 9.6e-11 71.6 119 40.3
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 5.2e-09 65.9 86 45.3
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 1.7e-07 60.8 78 41.0
FAN15G2669 Fragaria x ananassa HOM05D008372 ORTHO05D010559 2.9e-07 60.1 80 46.2


User provided reference genes

Program Settings