Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03359 Nelumbo nucifera HOM05D000325 ORTHO05D276899 2.8e-49 198.4 103 100.0
Nn4g23803 Nelumbo nucifera HOM05D000325 ORTHO05D002981 3.6e-09 65.1 50 74.0
Glyma.01G083000 Glycine max HOM05D000325 ORTHO05D002981 3.4e-07 58.5 38 76.3
Glyma.08G260500 Glycine max HOM05D000325 ORTHO05D002981 3.4e-07 58.5 38 76.3
Phvul.002G082300 Phaseolus vulgaris HOM05D000325 ORTHO05D002981 3.4e-07 58.5 38 76.3
VMungo1215G1418 Vigna mungo HOM05D000325 ORTHO05D002981 3.4e-07 58.5 38 76.3
Nn3g17800 Nelumbo nucifera HOM05D000325 ORTHO05D002981 4.5e-07 58.2 37 78.4
TWI79G1668 Tripterygium wilfordii HOM05D000325 ORTHO05D002981 7.6e-07 57.4 37 73.0
TAR629G3255 Trochodendron aralioides HOM05D000325 ORTHO05D002981 7.6e-07 57.4 51 62.7
Ca_11185_v3 Cicer arietinum L. HOM05D000325 ORTHO05D002981 9.9e-07 57.0 38 73.7
ClCG05G022850 Citrullus lanatus HOM05D000325 ORTHO05D002981 1.3e-06 56.6 37 75.7
MELO3C012232.2 Cucumis melo HOM05D000325 ORTHO05D002981 1.3e-06 56.6 37 75.7
CsaV3_5G034180 Cucumis sativus L. HOM05D000325 ORTHO05D002981 1.3e-06 56.6 37 75.7
BcaC05g25056 Brassica carinata HOM05D000325 ORTHO05D002981 1.7e-06 56.2 37 73.0
C05p09960 Brassica napus HOM05D000325 ORTHO05D002981 1.7e-06 56.2 37 73.0
BolC5t29738H Brassica oleracea HOM05D000325 ORTHO05D002981 1.7e-06 56.2 37 73.0
BraA06t24038Z Brassica rapa HOM05D000325 ORTHO05D002981 1.7e-06 56.2 37 73.0
Lalb_Chr10g0099921 Lupinus albus HOM05D000325 ORTHO05D002981 1.7e-06 56.2 38 73.7
Sed0008604 Sechium edule HOM05D000325 ORTHO05D002981 1.7e-06 56.2 37 73.0
Dinv21109 Davidia involucrata HOM05D000325 ORTHO05D002981 2.2e-06 55.8 38 73.7
TPR.G26272 Trifolium pratense HOM05D000325 ORTHO05D002981 2.2e-06 55.8 38 71.1
Sabra10G0096500 Salix brachista HOM05D000325 ORTHO05D002981 2.9e-06 55.5 51 58.8
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 3.8e-06 55.1 41 65.9
CARHR013720 Cardamine hirsuta HOM05D000325 ORTHO05D002981 3.8e-06 55.1 38 68.4
Peaxi162Scf00382g00132 Petunia axillaris HOM05D000325 ORTHO05D002981 3.8e-06 55.1 51 58.8
TWI31G0906 Tripterygium wilfordii HOM05D000325 ORTHO05D002981 3.8e-06 55.1 44 68.2
BcaB03g13147 Brassica carinata HOM05D000325 ORTHO05D002981 4.9e-06 54.7 37 70.3
BcaC07g41649 Brassica carinata HOM05D000325 ORTHO05D002981 4.9e-06 54.7 37 70.3
Carub.0001s1307 Capsella rubella HOM05D000325 ORTHO05D002981 4.9e-06 54.7 38 68.4
Aqoxy3G00329 Aquilegia oxysepala HOM05D000325 ORTHO05D002981 6.4e-06 54.3 51 62.7
BcaC07g38688 Brassica carinata HOM05D000325 ORTHO05D002981 6.4e-06 54.3 37 70.3
Lj2g0008373 Lotus japonicus HOM05D000325 ORTHO05D002981 6.4e-06 54.3 37 73.0
Lalb_Chr04g0254791 Lupinus albus HOM05D000325 ORTHO05D002981 6.4e-06 54.3 38 71.1
Nitab4.5_0003823g0060 Nicotiana tabacum HOM05D000325 ORTHO05D002981 6.4e-06 54.3 51 58.8
Atru.chr11.1295 Acer truncatum HOM05D000325 ORTHO05D002981 8.4e-06 53.9 34 73.5
Medtr1g111210 Medicago truncatula HOM05D000325 ORTHO05D002981 8.4e-06 53.9 38 68.4


User provided reference genes

Program Settings