Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 5.8e-141 504.2 256 100.0
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 2.9e-124 448.7 235 97.0
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.1e-122 442.6 235 94.9
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.1e-122 442.6 235 94.9
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 3.6e-122 441.8 235 93.6
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 1.8e-121 439.5 235 94.0
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 3.0e-121 438.7 235 93.2
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 3.9e-121 438.3 235 93.2
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 8.8e-121 437.2 235 94.0
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 8.8e-121 437.2 235 93.6
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 1.5e-120 436.4 235 92.8
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.5e-120 436.4 235 93.6
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 3.3e-120 435.3 235 92.8
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 5.7e-120 434.5 235 92.8
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 9.7e-120 433.7 235 92.3
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 9.7e-120 433.7 235 91.5
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 1.3e-119 433.3 235 92.3
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 1.3e-119 433.3 234 93.2
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 1.7e-119 433.0 235 91.9
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 2.2e-119 432.6 236 92.4
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 2.2e-119 432.6 236 92.4
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 2.8e-119 432.2 235 92.3
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 2.8e-119 432.2 235 92.8
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 2.8e-119 432.2 235 91.9
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 4.8e-119 431.4 234 91.9
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 4.8e-119 431.4 234 92.7
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 4.8e-119 431.4 234 92.3
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.8e-119 431.4 234 92.3
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 6.3e-119 431.0 235 91.5
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 6.3e-119 431.0 235 92.3
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 8.2e-119 430.6 235 91.1
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 1.1e-118 430.3 234 91.9
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 1.1e-118 430.3 234 92.3
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.1e-118 430.3 234 91.9
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.4e-118 429.9 234 91.5
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.4e-118 429.9 234 91.5
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 1.4e-118 429.9 234 92.7
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 1.8e-118 429.5 235 91.9
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 1.8e-118 429.5 235 91.9
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 1.8e-118 429.5 236 92.4
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 2.4e-118 429.1 235 90.6
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 3.1e-118 428.7 235 90.6
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 3.1e-118 428.7 236 90.7
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 3.1e-118 428.7 235 90.6
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 5.3e-118 427.9 235 90.6
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 6.9e-118 427.6 234 91.0
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 9.1e-118 427.2 235 91.1
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 1.2e-117 426.8 234 91.5
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 1.2e-117 426.8 234 91.5
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 1.5e-117 426.4 235 89.8
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 2.6e-117 425.6 235 89.8
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 3.4e-117 425.2 235 90.2
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 4.5e-117 424.9 234 91.5
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 5.9e-117 424.5 234 91.0
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 5.9e-117 424.5 234 91.0
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 7.7e-117 424.1 235 89.8
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 1.0e-116 423.7 235 89.8
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 1.0e-116 423.7 234 91.0
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 1.0e-116 423.7 234 91.0
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 1.7e-116 422.9 235 89.8
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.2e-116 422.5 235 89.8
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 2.9e-116 422.2 236 90.3
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 3.8e-116 421.8 235 89.4
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 5.0e-116 421.4 235 88.9
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 5.0e-116 421.4 235 89.8
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 5.0e-116 421.4 235 89.8
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 5.0e-116 421.4 235 89.8
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 5.0e-116 421.4 235 89.8
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 5.0e-116 421.4 234 89.3
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 8.5e-116 420.6 239 89.5
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 8.5e-116 420.6 235 88.9
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 8.5e-116 420.6 235 88.9
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 8.5e-116 420.6 236 89.8
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 1.4e-115 419.9 234 89.3
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.4e-115 419.9 234 89.3
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 1.4e-115 419.9 235 88.5
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 1.4e-115 419.9 234 89.7
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 1.4e-115 419.9 234 89.7
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 1.4e-115 419.9 234 89.3
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 1.9e-115 419.5 235 89.4
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 2.5e-115 419.1 235 88.5
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 2.5e-115 419.1 235 88.5
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 3.2e-115 418.7 234 90.6
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 3.2e-115 418.7 235 89.4
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 4.2e-115 418.3 234 90.2
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 4.2e-115 418.3 236 89.0
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 4.2e-115 418.3 236 89.0
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 5.5e-115 417.9 235 88.1
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 5.5e-115 417.9 235 88.1
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 5.5e-115 417.9 235 89.8
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 7.2e-115 417.5 234 90.2
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 9.4e-115 417.2 235 88.1
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 1.2e-114 416.8 235 89.4
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 1.2e-114 416.8 235 88.5
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 1.6e-114 416.4 234 89.7
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 1.6e-114 416.4 234 89.7
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 1.6e-114 416.4 234 90.2
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 1.6e-114 416.4 235 88.9
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 2.1e-114 416.0 234 89.7
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 2.1e-114 416.0 234 89.7
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 2.1e-114 416.0 236 89.0
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 2.7e-114 415.6 235 88.5
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 4.7e-114 414.8 234 89.3
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 4.7e-114 414.8 234 89.3
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 4.7e-114 414.8 234 88.5
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 6.1e-114 414.5 234 89.3
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 6.1e-114 414.5 236 88.6
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 8.0e-114 414.1 235 88.5
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 8.0e-114 414.1 236 87.7
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 8.0e-114 414.1 234 89.3
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 1.4e-113 413.3 259 83.0
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 1.8e-113 412.9 235 88.1
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 2.3e-113 412.5 250 85.6
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 1.1e-112 410.2 294 75.5
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 2.0e-112 409.5 235 87.7
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 2.6e-112 409.1 235 88.9
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 2.6e-112 409.1 235 88.9
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 2.6e-112 409.1 235 88.5
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 3.3e-112 408.7 235 87.2
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 9.7e-112 407.1 234 86.8
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 1.7e-111 406.4 235 86.4
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 2.2e-111 406.0 274 77.4
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 8.2e-111 404.1 235 86.4
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.8e-110 402.9 236 87.3
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 3.1e-110 402.1 280 76.8
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 1.9e-107 392.9 235 85.5
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 7.2e-107 391.0 239 83.7
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 1.2e-106 390.2 322 67.4
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 1.2e-106 390.2 227 88.1
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 1.8e-105 386.3 241 80.5
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 5.2e-105 384.8 237 81.4
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 5.7e-104 381.3 241 78.8
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 4.8e-103 378.3 241 78.8
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 4.1e-102 375.2 238 79.4
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 1.2e-101 373.6 241 77.2
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 1.6e-101 373.2 253 77.9
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 7.7e-101 370.9 213 87.8
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 1.7e-100 369.8 199 91.0
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 1.7e-100 369.8 199 91.0
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 6.1e-98 361.3 212 87.3
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 2.3e-89 332.8 234 73.9
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 1.7e-87 326.6 198 87.4
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 2.5e-83 312.8 234 72.6
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 3.3e-83 312.4 235 71.1
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 1.6e-82 310.1 172 90.1
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 3.6e-82 308.9 172 90.1
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 2.3e-81 306.2 179 87.7
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.5e-75 287.0 153 91.5
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 1.2e-74 283.9 155 88.4
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 5.6e-67 258.5 268 54.5
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 2.6e-56 223.0 138 82.6
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 4.4e-56 222.2 226 49.6
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 1.6e-50 203.8 232 45.7
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 8.7e-44 181.4 247 42.1
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 9.6e-43 177.9 234 50.9
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 1.6e-42 177.2 102 86.3
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 2.4e-38 163.3 199 52.3
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 5.1e-36 155.6 85 89.4
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 2.2e-31 140.2 153 53.6
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 3.9e-28 129.4 82 79.3
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 3.3e-27 126.3 84 75.0
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 1.1e-25 121.3 82 81.7
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 3.1e-25 119.8 128 53.9
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 4.0e-25 119.4 212 42.5
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 5.3e-25 119.0 232 36.2
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 4.5e-24 115.9 83 74.7
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 5.3e-17 92.4 89 51.7
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 9.0e-17 91.7 57 84.2
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 1.3e-15 87.8 51 86.3
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 5.0e-15 85.9 74 67.6
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 1.1e-14 84.7 51 78.4
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 2.1e-13 80.5 52 86.5
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 3.6e-13 79.7 41 87.8
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 3.3e-11 73.2 80 56.2
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.4e-11 72.0 38 86.8
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 6.3e-10 68.9 105 46.7
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 3.1e-09 66.6 45 82.2
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 3.1e-09 66.6 90 51.1
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 2.5e-06 57.0 90 48.9
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 4.2e-06 56.2 87 47.1


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