Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 1.4e-93 346.3 182 100.0
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 5.6e-45 184.9 176 59.1
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 1.1e-43 180.6 154 66.9
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 6.8e-43 177.9 184 59.2
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 4.4e-42 175.3 130 68.5
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 4.4e-42 175.3 168 58.9
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 7.5e-42 174.5 153 65.4
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 9.8e-42 174.1 178 57.9
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 1.7e-41 173.3 184 54.9
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 2.2e-41 172.9 178 56.7
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 2.9e-41 172.6 178 56.7
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 4.9e-41 171.8 184 57.6
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 2.4e-40 169.5 174 56.3
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 7.1e-40 167.9 188 52.7
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 9.2e-40 167.5 183 57.9
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 1.2e-39 167.2 166 56.6
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 2.1e-39 166.4 165 58.2
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 2.1e-39 166.4 163 61.3
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.7e-39 166.0 163 60.7
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 2.7e-39 166.0 180 55.6
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 3.5e-39 165.6 179 53.1
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 3.5e-39 165.6 161 59.0
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.5e-39 165.6 163 60.7
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 4.6e-39 165.2 183 54.6
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 6.0e-39 164.9 152 60.5
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 6.0e-39 164.9 143 63.6
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 6.0e-39 164.9 156 59.6
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 7.8e-39 164.5 148 60.8
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 7.8e-39 164.5 185 56.2
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 1.7e-38 163.3 154 55.8
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 3.0e-38 162.5 155 56.8
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.9e-38 162.2 153 60.8
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 3.9e-38 162.2 184 52.2
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 6.6e-38 161.4 184 53.8
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 8.6e-38 161.0 181 53.0
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 1.1e-37 160.6 167 55.7
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 1.1e-37 160.6 171 52.0
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 1.5e-37 160.2 128 71.1
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 1.5e-37 160.2 176 57.4
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 1.5e-37 160.2 144 59.7
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 2.5e-37 159.5 193 51.3
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 7.3e-37 157.9 183 51.9
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 1.1e-35 154.1 179 54.2
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 1.4e-35 153.7 180 50.6
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 3.1e-35 152.5 188 50.0
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 8.9e-35 151.0 151 57.6
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 2.6e-34 149.4 129 58.1
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 4.4e-34 148.7 185 49.7
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 4.4e-34 148.7 152 53.3
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 4.4e-34 148.7 195 51.3
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 4.4e-34 148.7 144 56.9
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 5.8e-34 148.3 182 51.6
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 7.6e-34 147.9 183 52.5
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 9.9e-34 147.5 100 72.0
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 9.9e-34 147.5 178 51.1
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 1.3e-33 147.1 157 57.3
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 2.2e-33 146.4 151 54.3
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 2.9e-33 146.0 156 54.5
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 3.8e-33 145.6 174 50.0
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 6.4e-33 144.8 160 53.1
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 8.4e-33 144.4 120 61.7
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 8.4e-33 144.4 178 49.4
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 1.1e-32 144.1 183 48.6
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 2.4e-32 142.9 185 47.6
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 2.4e-32 142.9 208 46.2
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 4.1e-32 142.1 115 66.1
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 4.1e-32 142.1 163 54.0
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 5.4e-32 141.7 158 50.0
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 5.4e-32 141.7 217 45.6
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 5.4e-32 141.7 185 50.3
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 5.4e-32 141.7 193 49.2
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 5.4e-32 141.7 193 49.2
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 5.4e-32 141.7 200 49.5
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 7.1e-32 141.4 185 47.6
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 7.1e-32 141.4 184 47.3
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 9.2e-32 141.0 197 49.7
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 1.6e-31 140.2 127 59.1
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 3.5e-31 139.0 103 68.0
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 7.8e-31 137.9 149 55.7
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.7e-30 136.7 167 47.9
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 3.0e-30 136.0 168 50.0
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 5.1e-30 135.2 232 44.8
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 8.6e-30 134.4 114 65.8
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 9.6e-29 131.0 120 58.3
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 8.9e-27 124.4 143 49.7
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 2.0e-26 123.2 147 47.6
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 3.0e-22 109.4 136 52.9
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 5.3e-19 98.6 134 49.3
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 9.9e-18 94.4 124 46.8
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 1.7e-17 93.6 56 85.7
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 2.2e-17 93.2 58 79.3
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 9.3e-16 87.8 77 61.0
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 2.5e-13 79.7 98 52.0
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 1.2e-10 70.9 59 62.7
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 2.2e-09 66.6 73 46.6
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 2.9e-09 66.2 120 34.2
Cre16.g687200 Chlamydomonas reinhardtii HOM05D007485 ORTHO05D009437 8.4e-09 64.7 129 34.1
Ca_22684_v3 Cicer arietinum L. HOM05D007485 ORTHO05D009437 2.1e-07 60.1 52 57.7
ClCG07G001710 Citrullus lanatus HOM05D007485 ORTHO05D009437 7.9e-07 58.2 112 44.6


User provided reference genes

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