Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g03084 Nelumbo nucifera HOM05D000508 ORTHO05D000371 1.1e-30 136.0 68 100.0
Nn4g23254 Nelumbo nucifera HOM05D000508 ORTHO05D000371 4.0e-12 74.3 98 49.0
QL03p069289 Quercus lobata HOM05D000508 ORTHO05D000371 4.0e-12 74.3 71 60.6
Manes.05G105500 Manihot esculenta HOM05D000508 ORTHO05D000371 7.5e-11 70.1 94 48.9
Nn3g17312 Nelumbo nucifera HOM05D000508 ORTHO05D000371 1.1e-09 66.2 94 47.9
QL03p069326 Quercus lobata HOM05D000508 ORTHO05D000371 1.4e-09 65.9 94 45.7
QL03p069397 Quercus lobata HOM05D000508 ORTHO05D000371 1.4e-09 65.9 94 45.7
Dinv16680 Davidia involucrata HOM05D000508 ORTHO05D000371 1.8e-09 65.5 93 45.2
QL03p069301 Quercus lobata HOM05D000508 ORTHO05D000371 2.4e-09 65.1 94 45.7
BcaC06g34009 Brassica carinata HOM05D000508 ORTHO05D000371 4.1e-09 64.3 96 43.8
C07p33730 Brassica napus HOM05D000508 ORTHO05D000371 4.1e-09 64.3 96 43.8
BolC7t43886H Brassica oleracea HOM05D000508 ORTHO05D000371 4.1e-09 64.3 96 43.8
Nn4g23255 Nelumbo nucifera HOM05D000508 ORTHO05D000371 4.1e-09 64.3 90 52.2
Nn4g23256 Nelumbo nucifera HOM05D000508 ORTHO05D000371 4.1e-09 64.3 94 45.7
Sp2g14170 Schrenkiella parvula HOM05D000508 ORTHO05D000371 4.1e-09 64.3 96 43.8
AT2G03240 Arabidopsis thaliana HOM05D000508 ORTHO05D000371 5.4e-09 63.9 96 43.8
BcaC03g17186 Brassica carinata HOM05D000508 ORTHO05D000371 5.4e-09 63.9 96 43.8
A02p33270 Brassica napus HOM05D000508 ORTHO05D000371 5.4e-09 63.9 96 43.8
C02p51150 Brassica napus HOM05D000508 ORTHO05D000371 5.4e-09 63.9 96 43.8
BolC2t11205H Brassica oleracea HOM05D000508 ORTHO05D000371 5.4e-09 63.9 96 43.8
Dinv16682 Davidia involucrata HOM05D000508 ORTHO05D000371 5.4e-09 63.9 93 45.2
BcaB08g34357 Brassica carinata HOM05D000508 ORTHO05D000371 7.0e-09 63.5 100 40.0
CiPaw.07G072000 Carya illinoinensis HOM05D000508 ORTHO05D000371 7.0e-09 63.5 94 44.7
CiPaw.07G072100 Carya illinoinensis HOM05D000508 ORTHO05D000371 7.0e-09 63.5 94 44.7
TWI31G0446 Tripterygium wilfordii HOM05D000508 ORTHO05D000371 7.0e-09 63.5 99 42.4
A06p43240 Brassica napus HOM05D000508 ORTHO05D000371 9.1e-09 63.2 96 43.8
BraA06t27210Z Brassica rapa HOM05D000508 ORTHO05D000371 9.1e-09 63.2 96 43.8
Carub.0005s0216 Capsella rubella HOM05D000508 ORTHO05D000371 9.1e-09 63.2 96 42.7
Duzib251G0220 Durio zibethinus HOM05D000508 ORTHO05D000371 1.2e-08 62.8 98 40.8
BraA02t08350Z Brassica rapa HOM05D000508 ORTHO05D000371 1.6e-08 62.4 96 42.7
CiPaw.07G072200 Carya illinoinensis HOM05D000508 ORTHO05D000371 1.6e-08 62.4 94 43.6
THA.LOC104805176 Tarenaya hassleriana HOM05D000508 ORTHO05D000371 1.6e-08 62.4 96 41.7
AL5G12890 Arabidopsis lyrata HOM05D000508 ORTHO05D000371 2.0e-08 62.0 96 42.7
Thhalv10003656m.g Eutrema salsugineum HOM05D000508 ORTHO05D000371 2.0e-08 62.0 96 42.7
Manes.09G036400 Manihot esculenta HOM05D000508 ORTHO05D000371 2.0e-08 62.0 94 44.7
Nn4g23249 Nelumbo nucifera HOM05D000508 ORTHO05D000371 2.0e-08 62.0 93 45.2
GSVIVG01003225001 Vitis vinifera HOM05D000508 ORTHO05D000371 2.7e-08 61.6 94 41.5
GSVIVG01003226001 Vitis vinifera HOM05D000508 ORTHO05D000371 2.7e-08 61.6 97 41.2
CiPaw.05G130400 Carya illinoinensis HOM05D000508 ORTHO05D000371 3.5e-08 61.2 97 42.3
Haze_11966 Corylus avellana HOM05D000508 ORTHO05D000371 3.5e-08 61.2 94 41.5
Potri.008G090400 Populus trichocarpa HOM05D000508 ORTHO05D000371 3.5e-08 61.2 90 45.6
QL03p069419 Quercus lobata HOM05D000508 ORTHO05D000371 3.5e-08 61.2 94 43.6
AL1G25880 Arabidopsis lyrata HOM05D000508 ORTHO05D000371 4.5e-08 60.8 94 41.5
BcaC05g25300 Brassica carinata HOM05D000508 ORTHO05D000371 4.5e-08 60.8 94 40.4
A06p10020 Brassica napus HOM05D000508 ORTHO05D000371 4.5e-08 60.8 94 40.4
C05p11800 Brassica napus HOM05D000508 ORTHO05D000371 4.5e-08 60.8 94 40.4
BolC5t29928H Brassica oleracea HOM05D000508 ORTHO05D000371 4.5e-08 60.8 94 40.4
BraA06t24187Z Brassica rapa HOM05D000508 ORTHO05D000371 4.5e-08 60.8 94 40.4
Duzib268G1007 Durio zibethinus HOM05D000508 ORTHO05D000371 4.5e-08 60.8 96 41.7
BcaB08g34358 Brassica carinata HOM05D000508 ORTHO05D000371 5.9e-08 60.5 96 40.6
C07p33760 Brassica napus HOM05D000508 ORTHO05D000371 5.9e-08 60.5 98 41.8
BolC7t43888H Brassica oleracea HOM05D000508 ORTHO05D000371 5.9e-08 60.5 98 41.8
COL.COLO4_27984 Corchorus olitorius HOM05D000508 ORTHO05D000371 5.9e-08 60.5 94 40.4
Gohir.D12G166700 Gossypium hirsutum HOM05D000508 ORTHO05D000371 5.9e-08 60.5 96 41.7
Gorai.008G179500 Gossypium raimondii HOM05D000508 ORTHO05D000371 5.9e-08 60.5 96 41.7
BcaB07g30309 Brassica carinata HOM05D000508 ORTHO05D000371 7.7e-08 60.1 96 41.7
Gohir.A05G305300 Gossypium hirsutum HOM05D000508 ORTHO05D000371 7.7e-08 60.1 96 41.7
Gohir.A05G307700 Gossypium hirsutum HOM05D000508 ORTHO05D000371 7.7e-08 60.1 95 43.2
Gorai.009G325000 Gossypium raimondii HOM05D000508 ORTHO05D000371 7.7e-08 60.1 96 41.7
Phvul.002G169700 Phaseolus vulgaris HOM05D000508 ORTHO05D000371 7.7e-08 60.1 92 42.4
Thecc.02G340600 Theobroma cacao HOM05D000508 ORTHO05D000371 7.7e-08 60.1 95 40.0
TAR622G0400 Trochodendron aralioides HOM05D000508 ORTHO05D000371 7.7e-08 60.1 94 42.6
TAR629G3147 Trochodendron aralioides HOM05D000508 ORTHO05D000371 7.7e-08 60.1 94 42.6
VMungo0251G0141 Vigna mungo HOM05D000508 ORTHO05D000371 7.7e-08 60.1 92 42.4
Aa31LG1G970 Aethionema arabicum HOM05D000508 ORTHO05D000371 1.0e-07 59.7 96 40.6
AT1G14040 Arabidopsis thaliana HOM05D000508 ORTHO05D000371 1.0e-07 59.7 94 40.4
BcaC07g41608 Brassica carinata HOM05D000508 ORTHO05D000371 1.0e-07 59.7 94 40.4
A09p62520 Brassica napus HOM05D000508 ORTHO05D000371 1.0e-07 59.7 94 40.4
C08p46080 Brassica napus HOM05D000508 ORTHO05D000371 1.0e-07 59.7 94 40.4
BolC8t52158H Brassica oleracea HOM05D000508 ORTHO05D000371 1.0e-07 59.7 94 40.4
BraA09t41616Z Brassica rapa HOM05D000508 ORTHO05D000371 1.0e-07 59.7 94 40.4
Gohir.D02G126900 Gossypium hirsutum HOM05D000508 ORTHO05D000371 1.0e-07 59.7 98 38.8
Gorai.005G142500 Gossypium raimondii HOM05D000508 ORTHO05D000371 1.0e-07 59.7 98 38.8
Lj3A1034T87 Lonicera japonica HOM05D000508 ORTHO05D000371 1.0e-07 59.7 94 42.6
A09p62540 Brassica napus HOM05D000508 ORTHO05D000371 1.3e-07 59.3 96 39.6
BraA09t41617Z Brassica rapa HOM05D000508 ORTHO05D000371 1.3e-07 59.3 96 39.6
Glyma.20G032400 Glycine max HOM05D000508 ORTHO05D000371 1.3e-07 59.3 92 41.3
TAR622G1369 Trochodendron aralioides HOM05D000508 ORTHO05D000371 1.3e-07 59.3 94 42.6
BcaC04g21496 Brassica carinata HOM05D000508 ORTHO05D000371 1.7e-07 58.9 96 40.6
BcaC06g31192 Brassica carinata HOM05D000508 ORTHO05D000371 1.7e-07 58.9 96 41.7
C09p31130 Brassica napus HOM05D000508 ORTHO05D000371 1.7e-07 58.9 96 40.6
BolC9t55970H Brassica oleracea HOM05D000508 ORTHO05D000371 1.7e-07 58.9 96 40.6
CiPaw.07G072400 Carya illinoinensis HOM05D000508 ORTHO05D000371 1.7e-07 58.9 95 42.1
COL.COLO4_27986 Corchorus olitorius HOM05D000508 ORTHO05D000371 1.7e-07 58.9 96 40.6
Thhalv10006818m.g Eutrema salsugineum HOM05D000508 ORTHO05D000371 1.7e-07 58.9 94 39.4
Glyma.20G032500 Glycine max HOM05D000508 ORTHO05D000371 1.7e-07 58.9 92 41.3
Glyma.20G032600 Glycine max HOM05D000508 ORTHO05D000371 1.7e-07 58.9 93 40.9
Aa31LG1G990 Aethionema arabicum HOM05D000508 ORTHO05D000371 2.3e-07 58.5 96 39.6
CANSAT64G2640 Cannabis sativa HOM05D000508 ORTHO05D000371 2.3e-07 58.5 94 40.4
CARHR145590 Cardamine hirsuta HOM05D000508 ORTHO05D000371 2.3e-07 58.5 96 39.6
Gohir.D05G305100 Gossypium hirsutum HOM05D000508 ORTHO05D000371 2.3e-07 58.5 96 40.6
Rhsim12G0132600 Rhododendron simsii HOM05D000508 ORTHO05D000371 2.3e-07 58.5 97 42.3
Sp1g12400 Schrenkiella parvula HOM05D000508 ORTHO05D000371 2.3e-07 58.5 94 39.4
GSVIVG01003219001 Vitis vinifera HOM05D000508 ORTHO05D000371 2.3e-07 58.5 96 43.8
A06p43210 Brassica napus HOM05D000508 ORTHO05D000371 2.9e-07 58.2 98 39.8
Gohir.A12G163700 Gossypium hirsutum HOM05D000508 ORTHO05D000371 2.9e-07 58.2 96 39.6
Hma1.2p1_1079F.1_g254840 Hydrangea macrophylla HOM05D000508 ORTHO05D000371 2.9e-07 58.2 98 42.9
Potri.010G164900 Populus trichocarpa HOM05D000508 ORTHO05D000371 2.9e-07 58.2 89 43.8
Sabra08G0067700 Salix brachista HOM05D000508 ORTHO05D000371 2.9e-07 58.2 89 43.8
Actinidia17744 Actinidia chinensis HOM05D000508 ORTHO05D000371 3.8e-07 57.8 94 41.5
A09p24260 Brassica napus HOM05D000508 ORTHO05D000371 3.8e-07 57.8 96 40.6
BraA09t38021Z Brassica rapa HOM05D000508 ORTHO05D000371 3.8e-07 57.8 96 40.6
Carub.0001s1373 Capsella rubella HOM05D000508 ORTHO05D000371 3.8e-07 57.8 96 39.6
Glyma.20G031700 Glycine max HOM05D000508 ORTHO05D000371 3.8e-07 57.8 101 40.6
Gorai.009G325300 Gossypium raimondii HOM05D000508 ORTHO05D000371 3.8e-07 57.8 95 42.1
Lj8C307T10 Lonicera japonica HOM05D000508 ORTHO05D000371 3.8e-07 57.8 91 42.9
Potri.010G165800 Populus trichocarpa HOM05D000508 ORTHO05D000371 3.8e-07 57.8 89 43.8
RhsimUnG0242800 Rhododendron simsii HOM05D000508 ORTHO05D000371 3.8e-07 57.8 97 42.3
Actinidia33218 Actinidia chinensis HOM05D000508 ORTHO05D000371 5.0e-07 57.4 95 41.1
AT2G03260 Arabidopsis thaliana HOM05D000508 ORTHO05D000371 5.0e-07 57.4 96 38.5
BcaC07g41609 Brassica carinata HOM05D000508 ORTHO05D000371 5.0e-07 57.4 96 38.5
C08p46090 Brassica napus HOM05D000508 ORTHO05D000371 5.0e-07 57.4 96 38.5
BolC8t52159H Brassica oleracea HOM05D000508 ORTHO05D000371 5.0e-07 57.4 96 38.5
Carub.0005s0218 Capsella rubella HOM05D000508 ORTHO05D000371 5.0e-07 57.4 96 38.5
Cpa.g.sc1.59 Carica papaya HOM05D000508 ORTHO05D000371 5.0e-07 57.4 96 39.6
Potri.010G165300 Populus trichocarpa HOM05D000508 ORTHO05D000371 5.0e-07 57.4 89 42.7
Sabra10G0125600 Salix brachista HOM05D000508 ORTHO05D000371 5.0e-07 57.4 94 40.4
Aqoxy3G03470 Aquilegia oxysepala HOM05D000508 ORTHO05D000371 6.6e-07 57.0 96 40.6
BcaC06g31190 Brassica carinata HOM05D000508 ORTHO05D000371 6.6e-07 57.0 93 39.8
BcaC06g31191 Brassica carinata HOM05D000508 ORTHO05D000371 6.6e-07 57.0 98 38.8
BraA06t27209Z Brassica rapa HOM05D000508 ORTHO05D000371 6.6e-07 57.0 93 39.8
CARHR145570 Cardamine hirsuta HOM05D000508 ORTHO05D000371 6.6e-07 57.0 96 40.6
DCAR_030998 Daucus carota HOM05D000508 ORTHO05D000371 6.6e-07 57.0 100 41.0
Thhalv10003663m.g Eutrema salsugineum HOM05D000508 ORTHO05D000371 6.6e-07 57.0 93 39.8
TAR365G0975 Trochodendron aralioides HOM05D000508 ORTHO05D000371 6.6e-07 57.0 94 41.5
BcaB07g30679 Brassica carinata HOM05D000508 ORTHO05D000371 8.6e-07 56.6 96 39.6
BcaC06g34008 Brassica carinata HOM05D000508 ORTHO05D000371 8.6e-07 56.6 93 39.8
BolC7t43889H Brassica oleracea HOM05D000508 ORTHO05D000371 8.6e-07 56.6 93 39.8
CANSAT64G1850 Cannabis sativa HOM05D000508 ORTHO05D000371 8.6e-07 56.6 91 39.6
MELO3C002952.2 Cucumis melo HOM05D000508 ORTHO05D000371 8.6e-07 56.6 96 39.6
Glyma.07G228400 Glycine max HOM05D000508 ORTHO05D000371 8.6e-07 56.6 101 39.6
Sabra08G0067800 Salix brachista HOM05D000508 ORTHO05D000371 8.6e-07 56.6 89 42.7
Sabra10G0125500 Salix brachista HOM05D000508 ORTHO05D000371 8.6e-07 56.6 93 40.9
Thecc.02G340800 Theobroma cacao HOM05D000508 ORTHO05D000371 8.6e-07 56.6 96 40.6
AL5G12900 Arabidopsis lyrata HOM05D000508 ORTHO05D000371 1.1e-06 56.2 96 36.5
GSVIVG01004438001 Vitis vinifera HOM05D000508 ORTHO05D000371 1.1e-06 56.2 36 75.0
CARHR014420 Cardamine hirsuta HOM05D000508 ORTHO05D000371 1.5e-06 55.8 94 38.3
Sed0015431 Sechium edule HOM05D000508 ORTHO05D000371 1.5e-06 55.8 100 37.0
Dinv34123 Davidia involucrata HOM05D000508 ORTHO05D000371 1.9e-06 55.5 80 46.2
Dinv34125 Davidia involucrata HOM05D000508 ORTHO05D000371 1.9e-06 55.5 80 46.2
QL03p069483 Quercus lobata HOM05D000508 ORTHO05D000371 1.9e-06 55.5 36 75.0
ClCG09G021900 Citrullus lanatus HOM05D000508 ORTHO05D000371 2.5e-06 55.1 96 38.5
CsaV3_5G025280 Cucumis sativus L. HOM05D000508 ORTHO05D000371 2.5e-06 55.1 96 38.5
BcaB07g30678 Brassica carinata HOM05D000508 ORTHO05D000371 3.3e-06 54.7 96 38.5
Lalb_Chr05g0220251 Lupinus albus HOM05D000508 ORTHO05D000371 3.3e-06 54.7 90 42.2
COL.COLO4_27985 Corchorus olitorius HOM05D000508 ORTHO05D000371 4.2e-06 54.3 93 38.7
Oeu027409.1 Olea europaea HOM05D000508 ORTHO05D000371 4.2e-06 54.3 91 44.0
Sabra10G0125200 Salix brachista HOM05D000508 ORTHO05D000371 4.2e-06 54.3 94 38.3
VMungo0251G2145 Vigna mungo HOM05D000508 ORTHO05D000371 4.2e-06 54.3 92 39.1
ATR0564G535 Amborella trichopoda HOM05D000508 ORTHO05D000371 5.5e-06 53.9 33 75.8
DCAR_023814 Daucus carota HOM05D000508 ORTHO05D000371 5.5e-06 53.9 36 72.2
Phvul.002G169600 Phaseolus vulgaris HOM05D000508 ORTHO05D000371 5.5e-06 53.9 92 39.1
Sed0014029 Sechium edule HOM05D000508 ORTHO05D000371 5.5e-06 53.9 98 36.7
DCAR_023825 Daucus carota HOM05D000508 ORTHO05D000371 7.2e-06 53.5 93 38.7
DCAR_027436 Daucus carota HOM05D000508 ORTHO05D000371 7.2e-06 53.5 36 69.4
Hma1.2p1_0357F.1_g134270 Hydrangea macrophylla HOM05D000508 ORTHO05D000371 9.5e-06 53.1 94 38.3


User provided reference genes

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