Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 2.9e-257 891.3 430 100.0
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 3.1e-195 685.3 432 75.5
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.2e-178 630.2 416 71.2
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 2.6e-178 629.0 431 70.3
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 2.9e-177 625.5 431 68.4
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 2.5e-176 622.5 431 68.7
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.6e-175 619.8 422 70.6
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 1.0e-174 617.1 421 68.6
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 3.3e-173 612.1 432 68.8
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 7.4e-173 610.9 432 67.8
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.4e-171 606.7 430 66.3
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 9.1e-171 604.0 431 68.0
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.7e-169 599.7 432 65.5
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 2.9e-169 599.0 434 67.5
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 2.9e-169 599.0 434 67.5
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 8.5e-169 597.4 433 66.1
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 4.2e-168 595.1 422 65.4
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 7.2e-168 594.3 422 65.4
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 9.4e-168 594.0 435 64.1
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 3.6e-167 592.0 431 66.1
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 6.1e-167 591.3 434 65.4
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.0e-166 590.5 435 67.8
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.0e-166 590.5 434 64.3
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 1.0e-166 590.5 432 64.1
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 3.0e-166 589.0 433 67.0
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 3.0e-166 589.0 418 65.1
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 4.0e-166 588.6 430 65.3
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 1.5e-165 586.6 432 63.9
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 2.6e-165 585.9 416 65.6
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 9.7e-165 583.9 431 66.1
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.3e-164 583.6 429 67.1
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 4.8e-164 581.6 425 65.9
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 4.8e-164 581.6 430 66.0
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 8.3e-164 580.9 389 70.7
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.1e-163 580.5 435 66.7
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 2.4e-163 579.3 432 66.9
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.1e-163 578.6 435 66.7
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 5.3e-163 578.2 432 65.3
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 9.1e-163 577.4 433 64.0
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 4.5e-162 575.1 443 64.1
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 1.7e-161 573.2 433 61.9
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 2.9e-161 572.4 440 64.3
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 5.0e-161 571.6 447 63.3
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 8.5e-161 570.9 435 62.5
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 1.9e-160 569.7 435 62.5
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.9e-160 569.7 428 62.6
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 8.0e-159 564.3 420 64.8
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 8.0e-159 564.3 427 63.2
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.4e-158 563.5 418 66.0
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 2.3e-158 562.8 400 65.2
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 6.8e-158 561.2 456 61.0
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 8.8e-158 560.8 420 64.0
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 2.0e-157 559.7 432 62.5
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 2.6e-157 559.3 418 65.8
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 8.3e-156 554.3 429 61.1
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 4.5e-154 548.5 419 63.0
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 1.3e-153 547.0 419 63.5
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 8.6e-153 544.3 419 62.3
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 8.6e-153 544.3 419 63.2
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 8.0e-151 537.7 528 54.0
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.4e-150 537.0 388 67.5
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 2.8e-148 529.3 425 60.2
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.7e-148 528.9 409 60.4
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 8.3e-148 527.7 391 65.0
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 1.0e-145 520.8 429 62.0
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 1.3e-145 520.4 433 58.2
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 2.5e-144 516.2 426 60.8
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 2.8e-143 512.7 411 61.1
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.4e-142 510.4 421 59.6
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 1.8e-142 510.0 429 58.7
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 3.5e-138 495.7 361 66.2
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 6.6e-137 491.5 359 65.5
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 5.8e-133 478.4 360 63.1
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 1.3e-132 477.2 441 54.2
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 4.9e-132 475.3 419 55.8
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 9.2e-131 471.1 430 53.7
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 3.5e-130 469.2 373 61.9
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 7.8e-130 468.0 426 55.9
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 8.6e-129 464.5 439 54.2
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 1.1e-128 464.2 427 55.5
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.8e-126 456.8 373 59.8
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 4.0e-126 455.7 436 53.9
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 4.0e-126 455.7 436 53.9
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 5.8e-125 451.8 434 53.5
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 9.9e-125 451.1 407 56.0
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.3e-124 450.7 409 55.7
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 1.3e-124 450.7 423 54.1
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 8.3e-124 448.0 409 55.5
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 1.9e-123 446.8 304 70.4
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 5.4e-123 445.3 435 53.6
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.2e-122 444.1 437 53.8
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 8.6e-121 438.0 660 39.2
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.2e-119 434.1 425 52.5
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.1e-118 429.5 419 51.3
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 2.4e-115 419.9 303 64.7
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.4e-93 346.3 292 59.9
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 2.3e-81 307.0 464 39.2
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.6e-77 293.5 236 62.3
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 4.6e-74 282.7 444 40.5
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 7.9e-74 282.0 274 55.5
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 1.2e-58 231.5 211 56.4
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 3.9e-57 226.5 214 50.9
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 1.4e-54 218.0 215 51.2
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 6.5e-52 209.1 146 69.2
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 8.8e-49 198.7 179 54.2
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 3.7e-47 193.4 198 47.5
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 3.8e-44 183.3 293 41.3
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 2.0e-37 161.0 113 64.6
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 5.9e-37 159.5 123 61.0
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 8.3e-31 139.0 110 60.0
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 1.5e-16 91.7 97 48.5
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 2.0e-16 91.3 104 44.2
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.5e-16 89.4 73 60.3
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 1.5e-11 75.1 98 41.8
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 5.2e-09 66.6 52 65.4
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 5.2e-09 66.6 198 27.3
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 7.6e-08 62.8 51 58.8
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 9.9e-08 62.4 234 26.9


User provided reference genes

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