Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 9.1e-90 333.6 171 100.0
Haze_14354 Corylus avellana HOM05D008138 ORTHO05D010043 1.9e-15 86.7 116 40.5
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.1e-14 83.2 93 48.4
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.8e-14 82.8 90 44.4
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.8e-14 82.0 90 46.7
Cfa007720 Carpinus fangiana HOM05D008138 ORTHO05D010043 1.4e-13 80.5 105 40.0
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.8e-13 80.1 86 51.2
Dinv33884 Davidia involucrata HOM05D008138 ORTHO05D010043 3.1e-13 79.3 91 44.0
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.2e-12 77.4 99 43.4
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.5e-12 75.5 99 42.4
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.5e-12 75.5 96 43.8
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.0e-11 74.3 96 43.8
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.3e-11 73.9 96 43.8
Ciclev10033630m.g Citrus clementina HOM05D008138 ORTHO05D010043 8.4e-11 71.2 88 45.5
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 7.1e-10 68.2 105 42.9
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 2.1e-09 66.6 76 48.7
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 7.9e-09 64.7 91 38.5
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 1.0e-08 64.3 107 36.4
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 1.3e-08 63.9 120 32.5
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 1.3e-08 63.9 84 44.0
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 2.3e-08 63.2 100 40.0
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 2.3e-08 63.2 107 36.4
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 3.9e-08 62.4 90 38.9
Ciclev10013077m.g Citrus clementina HOM05D008138 ORTHO05D010043 8.7e-08 61.2 97 41.2
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.5e-07 60.5 90 37.8
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-07 60.1 99 37.4
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 2.5e-07 59.7 103 36.9
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.3e-07 59.3 99 37.4
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 4.3e-07 58.9 87 39.1
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.7e-07 58.5 97 37.1
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.4e-07 58.2 93 37.6
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.4e-07 58.2 97 36.1
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.3e-06 57.4 90 40.0
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 1.3e-06 57.4 84 42.9
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 1.3e-06 57.4 90 37.8
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.6e-06 57.0 93 37.6
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 1.6e-06 57.0 90 38.9
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.7e-06 55.8 93 37.6
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.3e-06 55.1 93 35.5
QL10p055198 Quercus lobata HOM05D008138 ORTHO05D010043 8.2e-06 54.7 83 44.6
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 8.2e-06 54.7 97 36.1


User provided reference genes

Program Settings