Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02691 Nelumbo nucifera HOM05D004553 ORTHO05D005426 5.4e-67 258.1 190 100.0
Aqoxy5G00280 Aquilegia oxysepala HOM05D004553 ORTHO05D005426 6.0e-42 174.9 315 44.8
MBI17_g17502_MAGBIO Magnolia biondii HOM05D004553 ORTHO05D005426 1.1e-40 170.6 314 38.9
Nn3g19599 Nelumbo nucifera HOM05D004553 ORTHO05D005426 2.5e-40 169.5 315 39.7
Dinv34597 Davidia involucrata HOM05D004553 ORTHO05D005426 1.6e-39 166.8 307 39.1
Migut.D00406 Erythranthe guttata HOM05D004553 ORTHO05D005426 2.1e-39 166.4 302 38.7
SalBow6G2244 Salvia bowleyana HOM05D004553 ORTHO05D005426 1.1e-38 164.1 292 42.1
Actinidia21228 Actinidia chinensis HOM05D004553 ORTHO05D005426 1.4e-38 163.7 306 38.9
Oeu025823.1 Olea europaea HOM05D004553 ORTHO05D005426 2.4e-38 162.9 304 43.4
HanXRQChr10g0281111 Helianthus annuus HOM05D004553 ORTHO05D005426 3.1e-38 162.5 310 38.1
Zm00001eb259150 Zea mays HOM05D004553 ORTHO05D005426 3.1e-38 162.5 283 39.2
Lsat_1_v5_gn_9_9101 Lactuca sativa HOM05D004553 ORTHO05D005426 5.3e-38 161.8 306 38.2
Prupe.8G227700 Prunus persica HOM05D004553 ORTHO05D005426 9.0e-38 161.0 308 38.6
GSVIVG01028297001 Vitis vinifera HOM05D004553 ORTHO05D005426 1.2e-37 160.6 311 42.1
Actinidia23392 Actinidia chinensis HOM05D004553 ORTHO05D005426 1.5e-37 160.2 306 38.2
vmacro06125 Vaccinium macrocarpon HOM05D004553 ORTHO05D005426 4.5e-37 158.7 269 41.6
Nitab4.5_0009451g0050 Nicotiana tabacum HOM05D004553 ORTHO05D005426 1.7e-36 156.8 309 37.2
AUR62011903 Chenopodium quinoa HOM05D004553 ORTHO05D005426 2.2e-36 156.4 303 38.0
Hma1.2p1_0273F.1_g109950 Hydrangea macrophylla HOM05D004553 ORTHO05D005426 2.2e-36 156.4 309 37.2
PGR044G0761 Punica granatum HOM05D004553 ORTHO05D005426 2.9e-36 156.0 311 37.3
Nitab4.5_0000500g0290 Nicotiana tabacum HOM05D004553 ORTHO05D005426 3.8e-36 155.6 306 37.6
CAN.G572.12 Capsicum annuum HOM05D004553 ORTHO05D005426 4.9e-36 155.2 91 86.8
AUR62024744 Chenopodium quinoa HOM05D004553 ORTHO05D005426 4.9e-36 155.2 303 37.6
EL10Ac5g10427 Beta vulgaris HOM05D004553 ORTHO05D005426 6.5e-36 154.8 301 37.9
MD05G1201100 Malus domestica HOM05D004553 ORTHO05D005426 1.1e-35 154.1 308 37.3
Ciclev10021217m.g Citrus clementina HOM05D004553 ORTHO05D005426 1.4e-35 153.7 309 35.9
TAR365G0062 Trochodendron aralioides HOM05D004553 ORTHO05D005426 1.4e-35 153.7 95 85.3
Eucgr.K03287 Eucalyptus grandis HOM05D004553 ORTHO05D005426 1.9e-35 153.3 314 39.5
Hund09587 Selenicereus undatus HOM05D004553 ORTHO05D005426 1.9e-35 153.3 301 42.2
PGSC0003DMG400026216 Solanum tuberosum HOM05D004553 ORTHO05D005426 1.9e-35 153.3 91 86.8
PSO832G2284 Papaver somniferum HOM05D004553 ORTHO05D005426 2.5e-35 152.9 90 84.4
Nitab4.5_0001839g0070 Nicotiana tabacum HOM05D004553 ORTHO05D005426 4.2e-35 152.1 309 36.6
Rhsim01G0266400 Rhododendron simsii HOM05D004553 ORTHO05D005426 4.2e-35 152.1 91 83.5
MD10G1187900 Malus domestica HOM05D004553 ORTHO05D005426 5.5e-35 151.8 308 36.7
Ah.02g111810 Amaranthus hybridus HOM05D004553 ORTHO05D005426 7.1e-35 151.4 301 37.2
Solyc08g077830.1 Solanum lycopersicum HOM05D004553 ORTHO05D005426 7.1e-35 151.4 91 85.7
TAR636G3311 Trochodendron aralioides HOM05D004553 ORTHO05D005426 7.1e-35 151.4 95 82.1
SGA_v2.0_scaffold31G12652 Striga asiatica HOM05D004553 ORTHO05D005426 9.3e-35 151.0 315 37.1
vmacro02641 Vaccinium macrocarpon HOM05D004553 ORTHO05D005426 9.3e-35 151.0 263 44.1
Sopen08g026340 Solanum pennellii HOM05D004553 ORTHO05D005426 1.2e-34 150.6 91 85.7
Atru.chr5.1915 Acer truncatum HOM05D004553 ORTHO05D005426 1.6e-34 150.2 310 39.4
PSO675G7515 Papaver somniferum HOM05D004553 ORTHO05D005426 1.6e-34 150.2 308 36.0
PSO541G5588 Papaver somniferum HOM05D004553 ORTHO05D005426 2.1e-34 149.8 308 39.9
MSTRG.3646 Avicennia marina HOM05D004553 ORTHO05D005426 2.7e-34 149.4 304 38.8
Os12g0163300 Oryza sativa ssp. japonica HOM05D004553 ORTHO05D005426 2.7e-34 149.4 311 35.7
Os12g0626100 Oryza sativa ssp. japonica HOM05D004553 ORTHO05D005426 2.7e-34 149.4 307 35.8
HPP92_007745 Vanilla planifolia HOM05D004553 ORTHO05D005426 1.0e-33 147.5 310 36.5
Peaxi162Scf00324g00032 Petunia axillaris HOM05D004553 ORTHO05D005426 1.8e-33 146.7 301 35.5
DCAR_012530 Daucus carota HOM05D004553 ORTHO05D005426 2.3e-33 146.4 307 35.2
QL09p037745 Quercus lobata HOM05D004553 ORTHO05D005426 8.7e-33 144.4 313 35.1
ATR0794G102 Amborella trichopoda HOM05D004553 ORTHO05D005426 1.1e-32 144.1 95 76.8
Gohir.A07G211100 Gossypium hirsutum HOM05D004553 ORTHO05D005426 1.1e-32 144.1 307 35.5
Gohir.D07G217100 Gossypium hirsutum HOM05D004553 ORTHO05D005426 1.1e-32 144.1 307 35.5
Cfa002394 Carpinus fangiana HOM05D004553 ORTHO05D005426 1.9e-32 143.3 303 36.0
Cc03_g10870 Coffea canephora HOM05D004553 ORTHO05D005426 1.9e-32 143.3 303 36.0
Lj1A269G34 Lonicera japonica HOM05D004553 ORTHO05D005426 1.9e-32 143.3 91 78.0
DCAR_009311 Daucus carota HOM05D004553 ORTHO05D005426 2.5e-32 142.9 91 79.1
Duzib138G1605 Durio zibethinus HOM05D004553 ORTHO05D005426 3.3e-32 142.5 302 35.8
Cpa.g.sc50.47 Carica papaya HOM05D004553 ORTHO05D005426 4.3e-32 142.1 82 87.8
CsaV3_7G026990 Cucumis sativus L. HOM05D004553 ORTHO05D005426 4.3e-32 142.1 311 35.0
TWI12G0019 Tripterygium wilfordii HOM05D004553 ORTHO05D005426 4.3e-32 142.1 82 85.4
Carub.0005s2503 Capsella rubella HOM05D004553 ORTHO05D005426 5.7e-32 141.7 95 74.7
FAN15G2654 Fragaria x ananassa HOM05D004553 ORTHO05D005426 5.7e-32 141.7 318 34.6
THA.LOC104802841 Tarenaya hassleriana HOM05D004553 ORTHO05D005426 5.7e-32 141.7 82 85.4
Haze_24589 Corylus avellana HOM05D004553 ORTHO05D005426 7.4e-32 141.4 303 36.0
Haze_24593 Corylus avellana HOM05D004553 ORTHO05D005426 7.4e-32 141.4 303 36.0
FAN20G1146 Fragaria x ananassa HOM05D004553 ORTHO05D005426 7.4e-32 141.4 311 36.0
Sabra02G0033000 Salix brachista HOM05D004553 ORTHO05D005426 7.4e-32 141.4 301 35.2
AT3G58180 Arabidopsis thaliana HOM05D004553 ORTHO05D005426 9.6e-32 141.0 95 74.7
BolC6t37683H Brassica oleracea HOM05D004553 ORTHO05D005426 9.6e-32 141.0 82 84.1
FvH4_2g22010 Fragaria vesca HOM05D004553 ORTHO05D005426 9.6e-32 141.0 94 76.6
FAN24G1077 Fragaria x ananassa HOM05D004553 ORTHO05D005426 9.6e-32 141.0 94 76.6
Gorai.001G251500 Gossypium raimondii HOM05D004553 ORTHO05D005426 9.6e-32 141.0 307 35.2
Potri.005G221700 Populus trichocarpa HOM05D004553 ORTHO05D005426 9.6e-32 141.0 302 35.4
Sp5g04540 Schrenkiella parvula HOM05D004553 ORTHO05D005426 9.6e-32 141.0 84 82.1
Sed0015397 Sechium edule HOM05D004553 ORTHO05D005426 9.6e-32 141.0 311 34.4
RcHm_v2.0_Chr6g0288871 Rosa chinensis HOM05D004553 ORTHO05D005426 1.3e-31 140.6 311 36.3
Aa31LG10G12900 Aethionema arabicum HOM05D004553 ORTHO05D005426 1.6e-31 140.2 82 84.1
BcaC07g40268 Brassica carinata HOM05D004553 ORTHO05D005426 1.6e-31 140.2 84 81.0
A09p50940 Brassica napus HOM05D004553 ORTHO05D005426 1.6e-31 140.2 84 81.0
BolC8t50975H Brassica oleracea HOM05D004553 ORTHO05D005426 1.6e-31 140.2 84 81.0
BraA09t40540Z Brassica rapa HOM05D004553 ORTHO05D005426 1.6e-31 140.2 84 81.0
BcaC08g44904 Brassica carinata HOM05D004553 ORTHO05D005426 2.1e-31 139.8 82 82.9
ClCG09G008080 Citrullus lanatus HOM05D004553 ORTHO05D005426 2.1e-31 139.8 311 34.4
FAN27G3448 Fragaria x ananassa HOM05D004553 ORTHO05D005426 2.1e-31 139.8 94 76.6
BcaC07g40188 Brassica carinata HOM05D004553 ORTHO05D005426 2.8e-31 139.4 84 79.8
Sc05g0000780 Simmondsia chinensis HOM05D004553 ORTHO05D005426 3.7e-31 139.0 91 79.1
Potri.002G041400 Populus trichocarpa HOM05D004553 ORTHO05D005426 4.8e-31 138.7 301 34.9
AL5G39880 Arabidopsis lyrata HOM05D004553 ORTHO05D005426 6.3e-31 138.3 93 74.2
Sed0016387 Sechium edule HOM05D004553 ORTHO05D005426 6.3e-31 138.3 311 34.1
unitig_8.g3887 Utricularia gibba HOM05D004553 ORTHO05D005426 6.3e-31 138.3 91 78.0
COL.COLO4_05596 Corchorus olitorius HOM05D004553 ORTHO05D005426 1.1e-30 137.5 82 81.7
MELO3C012740.2 Cucumis melo HOM05D004553 ORTHO05D005426 1.1e-30 137.5 311 34.1
C06p25240 Brassica napus HOM05D004553 ORTHO05D005426 1.4e-30 137.1 80 83.8
BcaB02g07544 Brassica carinata HOM05D004553 ORTHO05D005426 1.8e-30 136.7 83 80.7
C08p33760 Brassica napus HOM05D004553 ORTHO05D005426 2.4e-30 136.3 82 80.5
Thhalv10006107m.g Eutrema salsugineum HOM05D004553 ORTHO05D005426 2.4e-30 136.3 80 83.8
Ca_02526_v3 Cicer arietinum L. HOM05D004553 ORTHO05D005426 3.1e-30 136.0 86 81.4
Psat3g059120 Pisum sativum HOM05D004553 ORTHO05D005426 3.1e-30 136.0 86 80.2
CANSAT21G2336 Cannabis sativa HOM05D004553 ORTHO05D005426 5.3e-30 135.2 87 77.0
arahy.Tifrunner.gnm1.ann1.9FA7V6 Arachis hypogaea HOM05D004553 ORTHO05D005426 9.0e-30 134.4 89 75.3
A07p23970 Brassica napus HOM05D004553 ORTHO05D005426 9.0e-30 134.4 80 82.5
BraA07t30048Z Brassica rapa HOM05D004553 ORTHO05D005426 9.0e-30 134.4 80 82.5
Phvul.001G159000 Phaseolus vulgaris HOM05D004553 ORTHO05D005426 9.0e-30 134.4 86 79.1
TPR.G5760 Trifolium pratense HOM05D004553 ORTHO05D005426 9.0e-30 134.4 86 79.1
VMungo1383G1775 Vigna mungo HOM05D004553 ORTHO05D005426 9.0e-30 134.4 86 79.1
arahy.Tifrunner.gnm1.ann1.1I5KFR Arachis hypogaea HOM05D004553 ORTHO05D005426 1.2e-29 134.0 89 75.3
arahy.Tifrunner.gnm1.ann1.59X69N Arachis hypogaea HOM05D004553 ORTHO05D005426 1.5e-29 133.7 89 75.3
Medtr7g096510 Medicago truncatula HOM05D004553 ORTHO05D005426 2.6e-29 132.9 86 79.1
TPR.G18834 Trifolium pratense HOM05D004553 ORTHO05D005426 2.6e-29 132.9 87 77.0
arahy.Tifrunner.gnm1.ann1.6P10V3 Arachis hypogaea HOM05D004553 ORTHO05D005426 5.9e-29 131.7 89 74.2
Glyma.03G161100 Glycine max HOM05D004553 ORTHO05D005426 7.6e-29 131.3 302 38.4
CiPaw.03G261300 Carya illinoinensis HOM05D004553 ORTHO05D005426 1.0e-28 131.0 82 80.5
Lalb_Chr20g0107851 Lupinus albus HOM05D004553 ORTHO05D005426 1.3e-28 130.6 82 78.0
Manes.05G087500 Manihot esculenta HOM05D004553 ORTHO05D005426 1.3e-28 130.6 301 34.2
Psat0s2295g0120 Pisum sativum HOM05D004553 ORTHO05D005426 1.1e-27 127.5 86 75.6
SEGI_01794 Sequoiadendron giganteum HOM05D004553 ORTHO05D005426 4.2e-27 125.6 90 71.1
Glyma.19G162800 Glycine max HOM05D001448 ORTHO05D005781 9.3e-27 124.4 86 74.4
CDE04G0333 Ceratophyllum demersum HOM05D004553 ORTHO05D005426 2.7e-26 122.9 83 74.7
HPP92_007825 Vanilla planifolia HOM05D004553 ORTHO05D005426 2.7e-26 122.9 91 72.5
ECA247G2484 Erigeron canadensis HOM05D004553 ORTHO05D005426 2.3e-25 119.8 173 42.8
vmacro03822 Vaccinium macrocarpon HOM05D004553 ORTHO05D005426 2.3e-25 119.8 323 33.1
Thecc.01G262600 Theobroma cacao HOM05D004553 ORTHO05D005426 1.3e-23 114.0 189 40.2
CARHR168550 Cardamine hirsuta HOM05D004553 ORTHO05D005426 4.5e-21 105.5 72 72.2
CDE04G1470 Ceratophyllum demersum HOM05D004553 ORTHO05D005426 3.8e-20 102.4 158 40.5
TWI18G0975 Tripterygium wilfordii HOM05D004553 ORTHO05D005426 3.8e-20 102.4 87 65.5
SHI26037 Sapria himalayana HOM05D004553 ORTHO05D000023 1.4e-19 100.5 160 40.6
SMO304G0012 Selaginella moellendorffii HOM05D004553 ORTHO05D005426 1.6e-18 97.1 81 65.4
Psat0s2087g0120 Pisum sativum HOM05D004553 ORTHO05D005426 1.0e-17 94.4 159 38.4
AagrBONN_evm.TU.Sc2ySwM_117.1472 Anthoceros agrestis HOM05D004553 ORTHO05D005426 1.4e-17 94.0 84 63.1
AagrBONN_evm.TU.Sc2ySwM_228.3863 Anthoceros agrestis HOM05D004553 ORTHO05D005426 6.7e-17 91.7 74 66.2
CBR_g46193 Chara braunii HOM05D004553 ORTHO05D005426 6.7e-17 91.7 86 58.1
Oeu016862.1 Olea europaea HOM05D004553 ORTHO05D005426 1.5e-16 90.5 84 60.7
CARHR168560 Cardamine hirsuta HOM05D004553 ORTHO05D005426 9.7e-16 87.8 170 45.3
Mapoly0065s0014 Marchantia polymorpha HOM05D004553 ORTHO05D005426 1.1e-14 84.3 165 43.6
Oeu058648.1 Olea europaea HOM05D004553 ORTHO05D005426 2.4e-14 83.2 82 58.5
Pp3c11_17490 Physcomitrium patens HOM05D004553 ORTHO05D005426 5.3e-14 82.0 94 52.1
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 9.1e-14 81.3 140 37.1
Cre10.g435550 Chlamydomonas reinhardtii HOM05D004553 ORTHO05D005426 9.4e-11 71.2 79 43.0
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 3.6e-10 69.3 159 43.4
BcaC01g01031 Brassica carinata HOM05D004553 ORTHO05D005426 6.1e-10 68.6 67 55.2
C03p87400 Brassica napus HOM05D004553 ORTHO05D005426 6.1e-10 68.6 67 55.2
BolC3t21049H Brassica oleracea HOM05D004553 ORTHO05D005426 6.1e-10 68.6 67 55.2
FvH4_2g19410 Fragaria vesca HOM05D004553 ORTHO05D005426 1.0e-09 67.8 42 81.0
MCO15G119 Micromonas commoda HOM05D004553 ORTHO05D005426 3.7e-07 59.3 161 31.1
Haze_27369 Corylus avellana HOM05D004553 ORTHO05D005426 1.8e-06 57.0 163 27.6
Psat0s2088g0080 Pisum sativum HOM05D004553 ORTHO05D005426 4.1e-06 55.8 66 43.9
AT3G62530 Arabidopsis thaliana HOM05D004553 ORTHO05D005426 5.3e-06 55.5 158 25.9


User provided reference genes

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