Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 2.3e-151 538.9 276 100.0
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 3.5e-91 339.0 373 55.5
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 3.2e-84 315.8 380 53.9
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.2e-78 297.4 217 73.3
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 1.2e-78 297.4 222 72.5
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 5.8e-78 295.0 217 72.4
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 1.7e-77 293.5 268 60.4
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 3.2e-76 289.3 217 74.2
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 5.4e-76 288.5 209 73.7
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 7.1e-76 288.1 215 74.4
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 3.5e-75 285.8 217 71.9
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 4.6e-75 285.4 217 70.0
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 6.0e-75 285.0 216 74.1
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 1.0e-74 284.3 217 68.7
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 1.0e-74 284.3 221 69.7
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 1.1e-73 280.8 217 67.7
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 5.6e-73 278.5 208 73.1
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 2.1e-72 276.6 215 72.1
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 3.6e-72 275.8 203 73.4
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 1.8e-71 273.5 276 59.1
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 2.4e-71 273.1 216 69.9
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 3.1e-71 272.7 240 64.2
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 4.0e-71 272.3 254 60.6
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 5.3e-71 271.9 216 69.0
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 6.9e-71 271.6 217 66.8
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 1.5e-70 270.4 271 57.2
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 2.6e-70 269.6 271 57.2
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 4.5e-70 268.9 271 56.8
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 5.8e-70 268.5 272 58.5
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 7.6e-70 268.1 286 56.6
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 1.7e-69 266.9 217 67.7
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 1.7e-69 266.9 217 70.0
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 8.4e-69 264.6 243 60.1
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 3.2e-68 262.7 236 63.1
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 1.6e-67 260.4 269 60.6
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 7.9e-67 258.1 220 65.9
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 3.0e-66 256.1 220 64.5
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 3.0e-66 256.1 214 66.4
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 3.0e-66 256.1 216 66.2
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 6.7e-66 255.0 271 54.6
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 6.7e-66 255.0 239 60.3
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 6.7e-66 255.0 247 57.5
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 8.7e-66 254.6 211 66.8
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 1.5e-65 253.8 215 65.1
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 2.5e-65 253.1 218 65.1
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 2.5e-65 253.1 221 63.3
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 1.6e-64 250.4 196 68.9
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 6.2e-64 248.4 220 65.5
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 1.4e-63 247.3 222 63.5
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 1.8e-63 246.9 270 56.3
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 3.1e-63 246.1 193 65.8
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 6.9e-63 245.0 283 51.9
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 1.5e-62 243.8 276 53.6
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 1.5e-62 243.8 251 56.6
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 2.0e-62 243.4 214 63.1
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 3.4e-62 242.7 197 66.5
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 7.6e-62 241.5 260 58.5
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 9.9e-62 241.1 210 64.3
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 1.3e-61 240.7 208 63.0
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 2.9e-61 239.6 218 61.5
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 2.9e-61 239.6 254 56.3
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 2.9e-61 239.6 213 62.4
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 3.8e-61 239.2 218 61.5
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 1.4e-60 237.3 210 62.9
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 1.4e-60 237.3 191 66.5
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 1.4e-60 237.3 210 63.8
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 1.9e-60 236.9 274 52.2
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 2.4e-60 236.5 219 60.7
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 4.2e-60 235.7 214 59.3
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 4.2e-60 235.7 255 54.5
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 5.5e-60 235.3 285 50.2
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 7.1e-60 235.0 210 62.9
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 9.3e-60 234.6 195 66.7
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.2e-59 234.2 210 62.4
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 2.7e-59 233.0 210 62.4
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 2.7e-59 233.0 210 62.4
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 6.0e-59 231.9 205 63.4
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 6.0e-59 231.9 222 62.6
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 7.9e-59 231.5 267 52.8
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 7.9e-59 231.5 267 52.8
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 1.0e-58 231.1 218 61.0
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 1.8e-58 230.3 215 60.9
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 1.8e-58 230.3 278 51.1
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.0e-58 229.6 251 53.0
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.5e-57 227.3 209 60.8
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.9e-57 226.9 210 61.0
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 3.3e-57 226.1 214 57.9
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 4.3e-57 225.7 215 61.4
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 5.6e-57 225.3 250 53.2
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 5.6e-57 225.3 155 70.3
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 5.6e-57 225.3 191 63.9
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 7.4e-57 224.9 271 50.6
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 9.6e-57 224.6 216 59.3
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 2.8e-56 223.0 262 52.3
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 6.2e-56 221.9 197 61.4
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 6.2e-56 221.9 290 47.2
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 8.2e-56 221.5 219 58.0
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 1.5e-54 217.2 217 59.0
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 1.5e-54 217.2 209 56.5
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 2.6e-54 216.5 211 60.7
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 1.0e-53 214.5 154 70.1
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 1.0e-53 214.5 302 47.7
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 1.7e-53 213.8 152 69.1
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 2.2e-53 213.4 154 70.1
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 4.9e-53 212.2 197 58.9
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 3.2e-52 209.5 307 43.3
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 2.1e-51 206.8 224 53.6
Actinidia35586 Actinidia chinensis HOM05D004030 ORTHO05D004952 9.7e-49 198.0 305 45.6
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.6e-48 197.2 255 49.0
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 1.3e-45 187.6 187 55.6
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 2.5e-44 183.3 148 65.5
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 4.6e-43 179.1 242 48.3
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 1.8e-42 177.2 113 77.0
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 3.9e-42 176.0 149 61.7
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 2.5e-41 173.3 192 54.2
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 2.4e-39 166.8 222 45.5
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 3.1e-39 166.4 208 49.0
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 3.1e-39 166.4 194 51.0
Lj9A197T43 Lonicera japonica HOM05D004030 ORTHO05D004952 1.4e-34 151.0 157 60.5
Cpa.g.sc7.87 Carica papaya HOM05D004030 ORTHO05D004952 3.3e-33 146.4 142 62.7
BcaB03g13895 Brassica carinata HOM05D004030 ORTHO05D004952 3.7e-32 142.9 158 53.8
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 1.4e-31 141.0 249 41.4
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 1.8e-31 140.6 263 38.8
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 2.6e-30 136.7 238 38.7
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 2.6e-30 136.7 239 39.7
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 1.1e-28 131.3 76 80.3
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.1e-28 131.3 69 87.0
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 1.9e-28 130.6 79 77.2
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 4.2e-28 129.4 69 85.5
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 5.5e-28 129.0 67 86.6
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 1.2e-27 127.9 72 80.6
Aqoxy2G00428 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 1.6e-27 127.5 190 43.7
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 4.7e-27 125.9 70 82.9
CDE10G0435 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 1.8e-26 124.0 147 53.7
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 2.3e-26 123.6 69 84.1
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 6.7e-26 122.1 87 71.3
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 2.0e-25 120.6 153 44.4
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 2.6e-25 120.2 194 42.3
Nn1g05398 Nelumbo nucifera HOM05D067915 ORTHO05D049297 5.7e-25 119.0 62 93.5
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 3.7e-24 116.3 78 74.4
Nn1g05392 Nelumbo nucifera HOM05D067915 ORTHO05D049297 2.0e-22 110.5 64 85.9
Actinidia37045 Actinidia chinensis HOM05D004030 ORTHO05D004952 1.7e-21 107.5 244 34.8
unitig_899.g15398 Utricularia gibba HOM05D004030 ORTHO05D004952 1.6e-19 100.9 159 45.3
Nitab4.5_0000271g0330 Nicotiana tabacum HOM05D004030 ORTHO05D004952 2.6e-17 93.6 73 61.6
Nitab4.5_0004602g0020 Nicotiana tabacum HOM05D004030 ORTHO05D004952 3.3e-17 93.2 73 61.6
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 9.7e-17 91.7 91 48.4
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 1.1e-15 88.2 145 38.6
FAN23G1607 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.1e-15 85.1 113 46.9
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 8.0e-11 72.0 83 47.0
Lalb_Chr15g0086171 Lupinus albus HOM05D004030 ORTHO05D004952 4.4e-09 66.2 85 49.4
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 4.4e-09 66.2 90 37.8
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 2.4e-07 60.5 170 28.8


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