Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02588 Nelumbo nucifera HOM05D000843 ORTHO05D000698 2.5e-65 251.9 122 100.0
Nn2g14615 Nelumbo nucifera HOM05D000843 ORTHO05D000698 1.1e-44 183.3 147 65.3
Nn4g26606 Nelumbo nucifera HOM05D000843 ORTHO05D000698 9.9e-38 160.2 132 65.2
TAR623G1014 Trochodendron aralioides HOM05D000843 ORTHO05D000698 4.9e-29 131.3 149 50.3
TAR369G0943 Trochodendron aralioides HOM05D000843 ORTHO05D000698 3.9e-26 121.7 149 48.3
CiPaw.13G048000 Carya illinoinensis HOM05D000843 ORTHO05D000698 3.8e-21 105.1 150 42.7
CiPaw.14G037900 Carya illinoinensis HOM05D000843 ORTHO05D000698 6.0e-19 97.8 153 41.8
Actinidia22476 Actinidia chinensis HOM05D000843 ORTHO05D000698 4.3e-17 91.7 149 37.6
QL04p050738 Quercus lobata HOM05D000843 ORTHO05D000698 7.3e-17 90.9 153 38.6
Sabra08G0007000 Salix brachista HOM05D000843 ORTHO05D000698 9.6e-17 90.5 153 41.2
TWI38G2026 Tripterygium wilfordii HOM05D000843 ORTHO05D000698 1.4e-15 86.7 151 37.1
Potri.008G011300 Populus trichocarpa HOM05D000843 ORTHO05D000698 1.8e-15 86.3 153 39.9
Ciclev10000608m.g Citrus clementina HOM05D000843 ORTHO05D000698 2.4e-15 85.9 156 38.5
Actinidia22477 Actinidia chinensis HOM05D000843 ORTHO05D000698 4.0e-15 85.1 149 37.6
QL01p020207 Quercus lobata HOM05D000843 ORTHO05D000698 6.9e-15 84.3 148 38.5
CSS0042368 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 9.0e-15 84.0 149 37.6
CiPaw.13G120900 Carya illinoinensis HOM05D000843 ORTHO05D000698 9.0e-15 84.0 148 36.5
Thecc.09G338000 Theobroma cacao HOM05D000843 ORTHO05D000698 9.0e-15 84.0 147 38.8
Aqoxy2G00022 Aquilegia oxysepala HOM05D000843 ORTHO05D000698 1.2e-14 83.6 148 37.2
Lj2C931T8 Lonicera japonica HOM05D000843 ORTHO05D000698 1.5e-14 83.2 149 36.2
Atru.chr12.1125 Acer truncatum HOM05D000843 ORTHO05D000698 3.4e-14 82.0 156 38.5
Ciclev10000617m.g Citrus clementina HOM05D000843 ORTHO05D000698 3.4e-14 82.0 156 35.9
Sabra10G0192900 Salix brachista HOM05D000843 ORTHO05D000698 5.8e-14 81.3 151 39.1
Nitab4.5_0007649g0020 Nicotiana tabacum HOM05D000843 ORTHO05D000698 9.9e-14 80.5 149 36.2
Cpa.g.sc54.30 Carica papaya HOM05D000843 ORTHO05D000698 1.3e-13 80.1 152 38.2
Manes.04G052000 Manihot esculenta HOM05D000843 ORTHO05D000698 1.3e-13 80.1 148 35.8
Nitab4.5_0000428g0210 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.3e-13 80.1 149 35.6
CSS0026723 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 1.7e-13 79.7 148 37.8
CSS0042440 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 1.7e-13 79.7 148 37.8
Atru.chr3.2868 Acer truncatum HOM05D000843 ORTHO05D000698 2.2e-13 79.3 151 35.8
Atru.chr3.2880 Acer truncatum HOM05D000843 ORTHO05D000698 2.2e-13 79.3 151 35.8
Cfa010264 Carpinus fangiana HOM05D000843 ORTHO05D000698 2.2e-13 79.3 153 36.6
Potri.010G247500 Populus trichocarpa HOM05D000843 ORTHO05D000698 2.2e-13 79.3 151 39.1
Dinv10728 Davidia involucrata HOM05D000843 ORTHO05D000698 4.9e-13 78.2 150 38.0
Dinv10733 Davidia involucrata HOM05D000843 ORTHO05D000698 4.9e-13 78.2 150 38.0
Gohir.A05G101500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 4.9e-13 78.2 122 38.5
Gohir.D05G101300 Gossypium hirsutum HOM05D000843 ORTHO05D000698 4.9e-13 78.2 122 38.5
Sed0007953 Sechium edule HOM05D000843 ORTHO05D000698 4.9e-13 78.2 149 35.6
Potri.009G159200 Populus trichocarpa HOM05D000843 ORTHO05D000698 6.4e-13 77.8 149 37.6
Rhsim01G0196400 Rhododendron simsii HOM05D000843 ORTHO05D000698 6.4e-13 77.8 152 35.5
Cfa010435 Carpinus fangiana HOM05D000843 ORTHO05D000698 8.4e-13 77.4 155 34.8
Hma1.2p1_0218F.1_g092710 Hydrangea macrophylla HOM05D000843 ORTHO05D000698 8.4e-13 77.4 150 36.0
MBI19_g37617_MAGBIO Magnolia biondii HOM05D000843 ORTHO05D000698 8.4e-13 77.4 148 37.2
ClCG03G014100 Citrullus lanatus HOM05D000843 ORTHO05D000698 2.4e-12 75.9 150 35.3
Gohir.D08G213800 Gossypium hirsutum HOM05D000843 ORTHO05D000698 2.4e-12 75.9 125 39.2
Gorai.009G105400 Gossypium raimondii HOM05D000843 ORTHO05D000698 2.4e-12 75.9 122 37.7
Prupe.2G058400 Prunus persica HOM05D000843 ORTHO05D000698 2.4e-12 75.9 149 38.3
GSVIVG01027355001 Vitis vinifera HOM05D000843 ORTHO05D000698 2.4e-12 75.9 61 60.7
MSTRG.18487 Avicennia marina HOM05D000843 ORTHO05D000698 3.2e-12 75.5 122 40.2
ClCG08G008610 Citrullus lanatus HOM05D000843 ORTHO05D000698 3.2e-12 75.5 138 39.1
Duzib168G1232 Durio zibethinus HOM05D000843 ORTHO05D000698 3.2e-12 75.5 125 37.6
Glyma.13G076700 Glycine max HOM05D000843 ORTHO05D000698 3.2e-12 75.5 149 32.9
PGSC0003DMG400008712 Solanum tuberosum HOM05D000843 ORTHO05D000698 3.2e-12 75.5 148 31.8
Sabra09G0124500 Salix brachista HOM05D000843 ORTHO05D000698 4.2e-12 75.1 150 36.0
Cc01_g07490 Coffea canephora HOM05D000843 ORTHO05D000698 5.4e-12 74.7 148 33.1
PSO675G4150 Papaver somniferum HOM05D000843 ORTHO05D000698 5.4e-12 74.7 163 35.0
COL.COLO4_18362 Corchorus olitorius HOM05D000843 ORTHO05D000698 7.1e-12 74.3 140 35.0
Gohir.A08G196600 Gossypium hirsutum HOM05D000843 ORTHO05D000698 7.1e-12 74.3 125 38.4
Lj9C661T11 Lonicera japonica HOM05D000843 ORTHO05D000698 9.3e-12 73.9 133 37.6
CsaV3_1G042150 Cucumis sativus L. HOM05D000843 ORTHO05D000698 1.2e-11 73.6 148 33.1
Gohir.D13G235600 Gossypium hirsutum HOM05D000843 ORTHO05D000698 1.2e-11 73.6 112 39.3
Gorai.004G227800 Gossypium raimondii HOM05D000843 ORTHO05D000698 1.2e-11 73.6 125 38.4
Gorai.013G266300 Gossypium raimondii HOM05D000843 ORTHO05D000698 1.2e-11 73.6 112 39.3
MBI13_g43840_MAGBIO Magnolia biondii HOM05D000843 ORTHO05D000698 1.2e-11 73.6 153 32.7
CANSAT56G3644 Cannabis sativa HOM05D000843 ORTHO05D000698 1.6e-11 73.2 157 33.8
PSO017G6549 Papaver somniferum HOM05D000843 ORTHO05D000698 2.7e-11 72.4 163 34.4
Duzib150G0618 Durio zibethinus HOM05D000843 ORTHO05D000698 3.5e-11 72.0 125 36.8
Gorai.003G140600 Gossypium raimondii HOM05D000843 ORTHO05D000698 3.5e-11 72.0 126 37.3
Duzib170G0752 Durio zibethinus HOM05D000843 ORTHO05D000698 4.6e-11 71.6 147 35.4
Ciclev10014617m.g Citrus clementina HOM05D000843 ORTHO05D000698 6.0e-11 71.2 147 34.0
MELO3C019931.2 Cucumis melo HOM05D000843 ORTHO05D000698 6.0e-11 71.2 150 36.7
Potri.004G197400 Populus trichocarpa HOM05D000843 ORTHO05D000698 6.0e-11 71.2 149 35.6
Solyc01g009170.4 Solanum lycopersicum HOM05D000843 ORTHO05D000698 6.0e-11 71.2 148 30.4
Sopen01g004640 Solanum pennellii HOM05D000843 ORTHO05D000698 6.0e-11 71.2 148 30.4
Cpa.g.sc103.60 Carica papaya HOM05D000843 ORTHO05D000698 7.9e-11 70.9 148 35.8
Haze_03389 Corylus avellana HOM05D000843 ORTHO05D000698 7.9e-11 70.9 155 33.5
Nitab4.5_0002184g0030 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.0e-10 70.5 148 32.4
CsaV3_6G004610 Cucumis sativus L. HOM05D000843 ORTHO05D000698 1.3e-10 70.1 150 35.3
Lalb_Chr17g0347541 Lupinus albus HOM05D000843 ORTHO05D000698 1.8e-10 69.7 153 30.7
Nitab4.5_0000271g0110 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.8e-10 69.7 148 32.4
TWI63G1341 Tripterygium wilfordii HOM05D000843 ORTHO05D000698 1.8e-10 69.7 150 35.3
Oeu058666.1 Olea europaea HOM05D000843 ORTHO05D000698 2.3e-10 69.3 147 32.7
Sed0011376 Sechium edule HOM05D000843 ORTHO05D000698 2.3e-10 69.3 149 33.6
Gohir.A03G034900 Gossypium hirsutum HOM05D000843 ORTHO05D000698 3.0e-10 68.9 125 36.8
TWI15G0036 Tripterygium wilfordii HOM05D000843 ORTHO05D000698 3.0e-10 68.9 151 32.5
MSTRG.20482 Avicennia marina HOM05D000843 ORTHO05D000698 5.1e-10 68.2 148 31.8
Peaxi162Scf00342g00073 Petunia axillaris HOM05D000843 ORTHO05D000698 5.1e-10 68.2 150 32.7
CAN.G65.223 Capsicum annuum HOM05D000843 ORTHO05D000698 6.7e-10 67.8 144 32.6
Eucgr.J00631 Eucalyptus grandis HOM05D000843 ORTHO05D000698 6.7e-10 67.8 141 33.3
Gohir.A13G230100 Gossypium hirsutum HOM05D000843 ORTHO05D000698 6.7e-10 67.8 64 53.1
Solyc06g073720.3 Solanum lycopersicum HOM05D000843 ORTHO05D000698 6.7e-10 67.8 148 31.8
Ca_06157_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 8.7e-10 67.4 149 33.6
Ca_29849_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 8.7e-10 67.4 149 33.6
MELO3C015633.2 Cucumis melo HOM05D000843 ORTHO05D000698 8.7e-10 67.4 148 31.8
EL10Ac4g08800 Beta vulgaris HOM05D000843 ORTHO05D000698 1.1e-09 67.0 157 31.8
CAN.G65.222 Capsicum annuum HOM05D000843 ORTHO05D000698 1.1e-09 67.0 148 33.1
Oeu048808.1 Olea europaea HOM05D000843 ORTHO05D000698 1.1e-09 67.0 149 32.9
Gohir.D03G133500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 1.5e-09 66.6 125 36.0
Sopen06g030130 Solanum pennellii HOM05D000843 ORTHO05D000698 1.5e-09 66.6 147 32.0
PGSC0003DMG400005915 Solanum tuberosum HOM05D000843 ORTHO05D000698 1.5e-09 66.6 148 31.1
THA.LOC104826472 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 1.5e-09 66.6 64 51.6
THA.LOC104816963 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 2.5e-09 65.9 64 48.4
PGSC0003DMG400005914 Solanum tuberosum HOM05D000843 ORTHO05D000698 3.3e-09 65.5 147 31.3
Haze_23673 Corylus avellana HOM05D000843 ORTHO05D000698 4.3e-09 65.1 152 34.9
SalBow6G1804 Salvia bowleyana HOM05D000843 ORTHO05D000698 4.3e-09 65.1 148 33.1
Solyc06g073730.2 Solanum lycopersicum HOM05D000843 ORTHO05D000698 4.3e-09 65.1 147 32.0
TPR.G22218 Trifolium pratense HOM05D000843 ORTHO05D000698 4.3e-09 65.1 151 33.8
THA.LOC104826471 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 5.6e-09 64.7 64 48.4
arahy.Tifrunner.gnm1.ann1.J729H0 Arachis hypogaea HOM05D000843 ORTHO05D000698 9.6e-09 63.9 148 35.8
Prupe.2G058500 Prunus persica HOM05D000843 ORTHO05D000698 1.3e-08 63.5 151 32.5
CAN.G864.1 Capsicum annuum HOM05D000843 ORTHO05D000698 1.6e-08 63.2 147 30.6
Cc07_g21390 Coffea canephora HOM05D000843 ORTHO05D000698 1.6e-08 63.2 142 31.0
Lj6g0001407 Lotus japonicus HOM05D000843 ORTHO05D000698 1.6e-08 63.2 149 29.5
Sopen06g030120 Solanum pennellii HOM05D000843 ORTHO05D000698 1.6e-08 63.2 56 51.8
arahy.Tifrunner.gnm1.ann1.S7XF8N Arachis hypogaea HOM05D000843 ORTHO05D000698 2.1e-08 62.8 148 35.1
Eucgr.G02632 Eucalyptus grandis HOM05D000843 ORTHO05D000698 2.1e-08 62.8 156 29.5
Peaxi162Scf01084g00017 Petunia axillaris HOM05D000843 ORTHO05D000698 3.7e-08 62.0 146 31.5
Glyma.02G274600 Glycine max HOM05D000843 ORTHO05D000698 4.8e-08 61.6 143 31.5
PSO541G5836 Papaver somniferum HOM05D000843 ORTHO05D000698 6.2e-08 61.2 149 30.9
Psat2g022320 Pisum sativum HOM05D000843 ORTHO05D000698 6.2e-08 61.2 146 32.9
Nitab4.5_0000271g0040 Nicotiana tabacum HOM05D000843 ORTHO05D000698 8.1e-08 60.8 126 33.3
Lalb_Chr10g0105921 Lupinus albus HOM05D000843 ORTHO05D000698 1.1e-07 60.5 153 30.1
Glyma.14G041500 Glycine max HOM05D000843 ORTHO05D000698 1.4e-07 60.1 150 30.7
Glyma.20G051500 Glycine max HOM05D000843 ORTHO05D000698 1.4e-07 60.1 153 32.7
LjContig00564g0001972 Lotus japonicus HOM05D000843 ORTHO05D000698 1.8e-07 59.7 149 31.5
Lalb_Chr04g0249691 Lupinus albus HOM05D000843 ORTHO05D000698 1.8e-07 59.7 157 31.8
Nitab4.5_0002687g0110 Nicotiana tabacum HOM05D000843 ORTHO05D000698 2.4e-07 59.3 147 29.9
Nitab4.5_0008999g0020 Nicotiana tabacum HOM05D000843 ORTHO05D000698 2.4e-07 59.3 147 29.9
Dinv25741 Davidia involucrata HOM05D000843 ORTHO05D000698 4.0e-07 58.5 157 31.8
Peaxi162Scf00526g00042 Petunia axillaris HOM05D000843 ORTHO05D000698 5.3e-07 58.2 117 33.3
Ah.06g191230 Amaranthus hybridus HOM05D000843 ORTHO05D000698 6.9e-07 57.8 154 30.5
MSTRG.17663 Avicennia marina HOM05D000843 ORTHO05D000698 6.9e-07 57.8 149 30.9
THA.LOC104816962 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 6.9e-07 57.8 64 42.2
EL10Ac9g22359 Beta vulgaris HOM05D000843 ORTHO05D000698 9.0e-07 57.4 64 43.8
PGR119G0809 Punica granatum HOM05D000843 ORTHO05D000698 1.2e-06 57.0 154 33.1
MD07G1053800 Malus domestica HOM05D000843 ORTHO05D000698 1.5e-06 56.6 149 31.5
Nitab4.5_0002184g0010 Nicotiana tabacum HOM05D000843 ORTHO05D000698 4.5e-06 55.1 150 30.0
Aa31LG8G7530 Aethionema arabicum HOM05D000843 ORTHO05D000698 7.6e-06 54.3 77 37.7
Phvul.008G207000 Phaseolus vulgaris HOM05D000843 ORTHO05D000698 7.6e-06 54.3 150 31.3


User provided reference genes

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