Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 0.0e+00 1661.7 1074 100.0
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 3.0e-98 364.4 1100 32.1
Aqoxy2G03478 Aquilegia oxysepala HOM05D008144 ORTHO05D031257 3.5e-22 111.7 388 32.5
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.5e-20 106.3 330 32.7
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 4.1e-18 98.2 501 26.5
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 5.3e-18 97.8 263 32.7
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 1.2e-17 96.7 367 31.1
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 1.4e-15 89.7 443 28.0
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 1.6e-14 86.3 389 27.0
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 2.7e-14 85.5 350 27.4
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 3.5e-14 85.1 263 31.2
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 4.6e-14 84.7 366 28.4
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 7.9e-14 84.0 261 29.9
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 6.7e-13 80.9 319 29.2
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 8.7e-13 80.5 495 23.0
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 1.5e-12 79.7 513 25.7
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 7.4e-12 77.4 1149 22.5
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 9.7e-12 77.0 543 25.2
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 2.8e-11 75.5 197 31.0
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 2.8e-11 75.5 197 31.0
MBI11_g00116_MAGBIO Magnolia biondii HOM05D008144 ORTHO05D010081 6.3e-11 74.3 209 32.1
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 3.1e-10 72.0 197 34.0
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 5.3e-10 71.2 202 32.2
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 6.9e-10 70.9 263 28.5
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 4.5e-09 68.2 512 25.8
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 5.9e-09 67.8 199 30.2
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 1.3e-08 66.6 486 23.7
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 1.3e-08 66.6 235 28.9
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 2.9e-08 65.5 518 23.2
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 8.5e-08 63.9 197 29.9
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 5.5e-07 61.2 296 26.0
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 7.2e-07 60.8 158 27.8
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 2.1e-06 59.3 207 28.0
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.6e-06 58.2 503 26.8
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 4.6e-06 58.2 503 26.8
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 7.9e-06 57.4 507 23.5


User provided reference genes

Program Settings