Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02382 Nelumbo nucifera HOM05D008098 ORTHO05D009893 3.7e-97 358.2 182 100.0
TAR636G3050 Trochodendron aralioides HOM05D008098 ORTHO05D009893 9.6e-29 131.0 140 54.3
TAR633G1927 Trochodendron aralioides HOM05D008098 ORTHO05D009893 5.2e-27 125.2 163 50.3
TAR633G0062 Trochodendron aralioides HOM05D008098 ORTHO05D009893 1.7e-25 120.2 162 46.3
TAR260G0007 Trochodendron aralioides HOM05D008098 ORTHO05D009893 1.1e-24 117.5 165 41.8
Dinv34781 Davidia involucrata HOM05D008098 ORTHO05D009893 1.2e-23 114.0 159 47.2
CSS0044396 Camellia sinensis var. sinensis HOM05D008098 ORTHO05D009893 6.0e-23 111.7 150 48.0
Dinv14021 Davidia involucrata HOM05D008098 ORTHO05D009893 6.6e-22 108.2 141 45.4
Hma1.2p1_1572F.1_g291470 Hydrangea macrophylla HOM05D008098 ORTHO05D009893 9.6e-21 104.4 142 46.5
Lj2A1168T22 Lonicera japonica HOM05D008098 ORTHO05D009893 6.9e-19 98.2 163 42.3
Lj9A530T23 Lonicera japonica HOM05D008098 ORTHO05D009893 6.9e-19 98.2 163 42.3
Manes.15G031000 Manihot esculenta HOM05D008098 ORTHO05D009893 9.0e-19 97.8 134 43.3
CSS0035580 Camellia sinensis var. sinensis HOM05D008098 ORTHO05D009893 9.9e-18 94.4 150 42.7
Actinidia00786 Actinidia chinensis HOM05D008098 ORTHO05D009893 6.4e-17 91.7 147 43.5
Dinv44560 Davidia involucrata HOM05D008098 ORTHO05D009893 2.4e-16 89.7 135 43.0
GSVIVG01001187001 Vitis vinifera HOM05D008098 ORTHO05D009893 2.1e-15 86.7 170 34.7
Rhsim13G0027200 Rhododendron simsii HOM05D008098 ORTHO05D009893 6.0e-15 85.1 148 41.2
Haze_04677 Corylus avellana HOM05D008098 ORTHO05D009893 2.3e-14 83.2 137 41.6
PGR044G2144 Punica granatum HOM05D008098 ORTHO05D009893 6.7e-14 81.6 135 40.7
CiPaw.07G089300 Carya illinoinensis HOM05D008098 ORTHO05D009893 1.5e-13 80.5 136 41.2
Cfa006173 Carpinus fangiana HOM05D008098 ORTHO05D009893 3.3e-13 79.3 138 39.1
Sc17g0001270 Simmondsia chinensis HOM05D008098 ORTHO05D009893 1.6e-12 77.0 134 37.3
Aqoxy5G00430 Aquilegia oxysepala HOM05D008098 ORTHO05D009893 2.4e-11 73.2 145 39.3
Prupe.1G018100 Prunus persica HOM05D008098 ORTHO05D009893 6.9e-11 71.6 134 35.8
Migut.D00327 Erythranthe guttata HOM05D008098 ORTHO05D009893 1.2e-10 70.9 98 44.9
MSTRG.17457 Avicennia marina HOM05D008098 ORTHO05D009893 2.0e-10 70.1 134 39.6
CSS0015317 Camellia sinensis var. sinensis HOM05D008098 ORTHO05D009893 2.6e-10 69.7 78 39.7
Prupe.8G237300 Prunus persica HOM05D008098 ORTHO05D009893 4.5e-10 68.9 134 37.3
TWI09G1469 Tripterygium wilfordii HOM05D039213 ORTHO05D037432 4.5e-10 68.9 133 36.8
Gohir.D09G220150 Gossypium hirsutum HOM05D008098 ORTHO05D009893 7.6e-10 68.2 111 35.1
MSTRG.18252 Avicennia marina HOM05D008098 ORTHO05D009893 2.9e-09 66.2 85 43.5
Rhsim04G0199800 Rhododendron simsii HOM05D008098 ORTHO05D009893 6.4e-09 65.1 134 32.8
Atru.chr4.2423 Acer truncatum HOM05D008098 ORTHO05D009893 8.4e-09 64.7 136 33.1
Actinidia23529 Actinidia chinensis HOM05D008098 ORTHO05D009893 8.4e-09 64.7 128 36.7
MSTRG.12554 Avicennia marina HOM05D008098 ORTHO05D009893 1.9e-08 63.5 134 35.8
Dinv17090 Davidia involucrata HOM05D008098 ORTHO05D009893 2.4e-08 63.2 135 32.6
Oeu023884.1 Olea europaea HOM05D008098 ORTHO05D009893 2.4e-08 63.2 96 38.5
Atru.chr5.1485 Acer truncatum HOM05D008098 ORTHO05D009893 1.2e-07 60.8 171 28.1
EL10Ac5g10528 Beta vulgaris HOM05D008098 ORTHO05D009893 2.1e-07 60.1 150 32.7
SGA_v2.0_scaffold1G00510 Striga asiatica HOM05D008098 ORTHO05D009893 4.6e-07 58.9 43 55.8
FAN21G3128 Fragaria x ananassa HOM05D025153 ORTHO05D009893 6.0e-07 58.5 37 62.2
Duzib138G1817 Durio zibethinus HOM05D008098 ORTHO05D009893 1.0e-06 57.8 140 35.0
Sabra05G0162400 Salix brachista HOM05D008098 ORTHO05D009893 1.0e-06 57.8 134 30.6
Ciclev10022764m.g Citrus clementina HOM05D008098 ORTHO05D009893 1.3e-06 57.4 138 34.8
DCAR_005861 Daucus carota HOM05D008098 ORTHO05D009893 1.8e-06 57.0 134 32.1
Ciclev10006287m.g Citrus clementina HOM05D008098 ORTHO05D009893 2.3e-06 56.6 116 37.9
Hund02840 Selenicereus undatus HOM05D008098 ORTHO05D009893 3.0e-06 56.2 135 34.8
AT5G11460 Arabidopsis thaliana HOM05D000690 ORTHO05D001022 5.1e-06 55.5 57 40.4
COL.COLO4_11875 Corchorus olitorius HOM05D008098 ORTHO05D009893 5.1e-06 55.5 135 31.9
FAN11G2600 Fragaria x ananassa HOM05D025153 ORTHO05D009893 5.1e-06 55.5 37 59.5
Potri.002G050100 Populus trichocarpa HOM05D008098 ORTHO05D009893 5.1e-06 55.5 40 52.5
Rhsim04G0201300 Rhododendron simsii HOM05D000690 ORTHO05D001022 6.7e-06 55.1 55 43.6
Mapoly0002s0054 Marchantia polymorpha HOM05D000562 ORTHO05D000388 8.7e-06 54.7 52 38.5
Pp3c25_400 Physcomitrium patens HOM05D000562 ORTHO05D000388 8.7e-06 54.7 82 37.8


User provided reference genes

Program Settings