Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02294 Nelumbo nucifera HOM05D004591 ORTHO05D005749 1.4e-33 145.6 68 100.0
Dinv38310 Davidia involucrata HOM05D004591 ORTHO05D005749 4.5e-16 87.4 83 61.4
Nn4g25961 Nelumbo nucifera HOM05D004591 ORTHO05D005749 9.4e-14 79.7 62 66.1
Nn1g09549 Nelumbo nucifera HOM05D004591 ORTHO05D005749 1.0e-12 76.3 62 64.5
Hma1.2p1_0698F.1_g205415 Hydrangea macrophylla HOM05D004591 ORTHO05D005749 1.2e-11 72.8 62 64.5
DCAR_002455 Daucus carota HOM05D004591 ORTHO05D005749 1.5e-11 72.4 62 61.3
DCAR_002457 Daucus carota HOM05D004591 ORTHO05D005749 1.5e-11 72.4 62 61.3
Nn3g21355 Nelumbo nucifera HOM05D004591 ORTHO05D005749 3.4e-11 71.2 62 62.9
Oeu062899.1 Olea europaea HOM05D004591 ORTHO05D005749 3.4e-11 71.2 62 62.9
TAR636G0963 Trochodendron aralioides HOM05D004591 ORTHO05D005749 3.4e-11 71.2 62 62.9
GSVIVG01017781001 Vitis vinifera HOM05D004591 ORTHO05D005749 3.4e-11 71.2 62 62.9
Oeu044779.2 Olea europaea HOM05D004591 ORTHO05D005749 4.4e-11 70.9 62 61.3
Lj3A813T31 Lonicera japonica HOM05D004591 ORTHO05D005749 5.7e-11 70.5 62 62.9
CDE12G0904 Ceratophyllum demersum HOM05D004591 ORTHO05D005749 9.8e-11 69.7 62 61.3
DCAR_002452 Daucus carota HOM05D004591 ORTHO05D005749 9.8e-11 69.7 71 54.9
MBI18_g01976_MAGBIO Magnolia biondii HOM05D004591 ORTHO05D005749 9.8e-11 69.7 62 62.9
Manes.15G015000 Manihot esculenta HOM05D004591 ORTHO05D005749 9.8e-11 69.7 62 61.3
TAR365G0597 Trochodendron aralioides HOM05D004591 ORTHO05D005749 9.8e-11 69.7 62 61.3
MSTRG.28019 Avicennia marina HOM05D004591 ORTHO05D005749 1.3e-10 69.3 62 61.3
Dinv44407 Davidia involucrata HOM05D004591 ORTHO05D005749 1.3e-10 69.3 62 62.9
SGA_v2.0_scaffold43G16263 Striga asiatica HOM05D004591 ORTHO05D005749 1.3e-10 69.3 62 61.3
unitig_578.g16759 Utricularia gibba HOM05D004591 ORTHO05D005749 1.3e-10 69.3 62 61.3
Manes.03G192300 Manihot esculenta HOM05D004591 ORTHO05D005749 1.7e-10 68.9 62 61.3
CiPaw.02G085000 Carya illinoinensis HOM05D004591 ORTHO05D005749 2.2e-10 68.6 62 59.7
AUR62041198 Chenopodium quinoa HOM05D004591 ORTHO05D005749 2.8e-10 68.2 62 59.7
AUR62043784 Chenopodium quinoa HOM05D004591 ORTHO05D005749 2.8e-10 68.2 62 59.7
Sabra08G0155500 Salix brachista HOM05D004591 ORTHO05D005749 2.8e-10 68.2 62 59.7
Hund20576 Selenicereus undatus HOM05D004591 ORTHO05D005749 2.8e-10 68.2 62 59.7
Actinidia01943 Actinidia chinensis HOM05D004591 ORTHO05D005749 3.7e-10 67.8 62 61.3
EL10Ac3g06572 Beta vulgaris HOM05D004591 ORTHO05D005749 3.7e-10 67.8 62 59.7
CAN.G580.3 Capsicum annuum HOM05D004591 ORTHO05D005749 3.7e-10 67.8 62 61.3
Cc03_g02140 Coffea canephora HOM05D004591 ORTHO05D005749 3.7e-10 67.8 62 59.7
Haze_01244 Corylus avellana HOM05D004591 ORTHO05D005749 3.7e-10 67.8 62 59.7
Migut.N01937 Erythranthe guttata HOM05D004591 ORTHO05D005749 3.7e-10 67.8 62 61.3
Peaxi162Scf00386g00533 Petunia axillaris HOM05D004591 ORTHO05D005749 3.7e-10 67.8 62 61.3
Solyc01g067500.3 Solanum lycopersicum HOM05D004591 ORTHO05D005749 3.7e-10 67.8 62 61.3
Sopen01g029430 Solanum pennellii HOM05D004591 ORTHO05D005749 3.7e-10 67.8 62 61.3
Eucgr.H03866 Eucalyptus grandis HOM05D004591 ORTHO05D005749 4.8e-10 67.4 62 58.1
Lsat_1_v5_gn_5_52860 Lactuca sativa HOM05D004591 ORTHO05D005749 4.8e-10 67.4 62 61.3
vmacro08109 Vaccinium macrocarpon HOM05D004591 ORTHO05D005749 6.3e-10 67.0 62 61.3
HPP92_016927 Vanilla planifolia HOM05D004591 ORTHO05D005749 6.3e-10 67.0 62 61.3
CSS0009969 Camellia sinensis var. sinensis HOM05D004591 ORTHO05D005749 8.3e-10 66.6 62 59.7
CSS0050493 Camellia sinensis var. sinensis HOM05D004591 ORTHO05D005749 8.3e-10 66.6 62 59.7
HanXRQChr03g0080861 Helianthus annuus HOM05D004591 ORTHO05D005749 8.3e-10 66.6 62 61.3
Potri.008G215300 Populus trichocarpa HOM05D004591 ORTHO05D005749 8.3e-10 66.6 62 59.7
PGR004G2200 Punica granatum HOM05D004591 ORTHO05D005749 8.3e-10 66.6 62 58.1
Potri.010G022300 Populus trichocarpa HOM05D004591 ORTHO05D005749 1.1e-09 66.2 62 58.1
THA.LOC104818847 Tarenaya hassleriana HOM05D004591 ORTHO05D005749 1.1e-09 66.2 62 58.1
Glyma.07G250200 Glycine max HOM05D004591 ORTHO05D005749 1.4e-09 65.9 62 58.1
Glyma.17G024200 Glycine max HOM05D004591 ORTHO05D005749 1.4e-09 65.9 62 58.1
Lj4g0005644 Lotus japonicus HOM05D004591 ORTHO05D005749 1.4e-09 65.9 62 58.1
QL06p007990 Quercus lobata HOM05D004591 ORTHO05D005749 1.4e-09 65.9 62 58.1
Ciclev10005060m.g Citrus clementina HOM05D004591 ORTHO05D005749 1.8e-09 65.5 62 56.5
Rhsim04G0218600 Rhododendron simsii HOM05D004591 ORTHO05D005749 1.8e-09 65.5 62 59.7
SalBow3G4019 Salvia bowleyana HOM05D004591 ORTHO05D005749 1.8e-09 65.5 62 58.1
Sc25g0004740 Simmondsia chinensis HOM05D004591 ORTHO05D005749 1.8e-09 65.5 62 58.1
COL.COLO4_13908 Corchorus olitorius HOM05D004591 ORTHO05D005749 2.4e-09 65.1 62 58.1
Thecc.04G279900 Theobroma cacao HOM05D004591 ORTHO05D005749 2.4e-09 65.1 62 58.1
Lj4g0023442 Lotus japonicus HOM05D004591 ORTHO05D005749 3.1e-09 64.7 62 56.5
Lalb_Chr13g0303761 Lupinus albus HOM05D004591 ORTHO05D005749 3.1e-09 64.7 62 56.5
Mapoly0035s0147 Marchantia polymorpha HOM05D004591 ORTHO05D005749 3.1e-09 64.7 62 53.2
TWI53G0054 Tripterygium wilfordii HOM05D004591 ORTHO05D005749 3.1e-09 64.7 62 58.1
TWI53G1348 Tripterygium wilfordii HOM05D004591 ORTHO05D005749 3.1e-09 64.7 62 58.1
Aqoxy2G03072 Aquilegia oxysepala HOM05D004591 ORTHO05D005749 4.1e-09 64.3 62 59.7
SEGI_19336 Sequoiadendron giganteum HOM05D004591 ORTHO05D005749 4.1e-09 64.3 62 56.5
Atru.chr4.2787 Acer truncatum HOM05D004591 ORTHO05D005749 5.4e-09 63.9 62 56.5
Actinidia40243 Actinidia chinensis HOM05D004591 ORTHO05D005749 5.4e-09 63.9 62 58.1
Cpa.g.sc16.135 Carica papaya HOM05D004591 ORTHO05D005749 5.4e-09 63.9 65 55.4
SMO118G0294 Selaginella moellendorffii HOM05D004591 ORTHO05D005749 5.4e-09 63.9 62 56.5
Ah.13g074560 Amaranthus hybridus HOM05D004591 ORTHO05D005749 7.0e-09 63.5 62 58.1
Phvul.003G102400 Phaseolus vulgaris HOM05D004591 ORTHO05D005749 7.0e-09 63.5 62 54.8
VMungo1215G2997 Vigna mungo HOM05D004591 ORTHO05D005749 7.0e-09 63.5 62 54.8
PSO210G4745 Papaver somniferum HOM05D004591 ORTHO05D005749 9.1e-09 63.2 62 56.5
PSO832G1860 Papaver somniferum HOM05D004591 ORTHO05D005749 9.1e-09 63.2 62 56.5
TWI09G1039 Tripterygium wilfordii HOM05D004591 ORTHO05D005749 1.2e-08 62.8 62 54.8
Duzib052G0124 Durio zibethinus HOM05D004591 ORTHO05D005749 1.6e-08 62.4 62 56.5
Lsat_1_v5_gn_2_7960 Lactuca sativa HOM05D004591 ORTHO05D005749 1.6e-08 62.4 62 58.1
Zm00001eb418170 Zea mays HOM05D004591 ORTHO05D005749 1.6e-08 62.4 62 56.5
Ca_21537_v3 Cicer arietinum L. HOM05D004591 ORTHO05D005749 2.0e-08 62.0 62 53.2
Os05g0149800 Oryza sativa ssp. japonica HOM05D004591 ORTHO05D005749 2.0e-08 62.0 62 56.5
Pp3c6_6290 Physcomitrium patens HOM05D004591 ORTHO05D005749 2.0e-08 62.0 70 51.4
AL6G29850 Arabidopsis lyrata HOM05D004591 ORTHO05D005749 2.7e-08 61.6 62 53.2
ClCG05G005920 Citrullus lanatus HOM05D004591 ORTHO05D005749 2.7e-08 61.6 62 54.8
MELO3C006623.2 Cucumis melo HOM05D004591 ORTHO05D005749 2.7e-08 61.6 62 54.8
CsaV3_3G014300 Cucumis sativus L. HOM05D004591 ORTHO05D005749 2.7e-08 61.6 62 54.8
Psat4g047160 Pisum sativum HOM05D004591 ORTHO05D005749 2.7e-08 61.6 62 51.6
Sed0000507 Sechium edule HOM05D004591 ORTHO05D005749 2.7e-08 61.6 62 54.8
Aa31LG11G11040 Aethionema arabicum HOM05D004591 ORTHO05D005749 3.5e-08 61.2 62 53.2
AagrBONN_evm.TU.Sc2ySwM_228.5538 Anthoceros agrestis HOM05D004591 ORTHO05D005749 7.7e-08 60.1 62 53.2
Zm00001eb354190 Zea mays HOM05D004591 ORTHO05D005749 7.7e-08 60.1 62 54.8
BcaB01g05264 Brassica carinata HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
BcaB05g23341 Brassica carinata HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
BcaC03g13610 Brassica carinata HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
A02p05010 Brassica napus HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
A03p08950 Brassica napus HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
C02p10040 Brassica napus HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
BolC2t06906H Brassica oleracea HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
BolC3t13524H Brassica oleracea HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
BraA02t05460Z Brassica rapa HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
BraA03t10221Z Brassica rapa HOM05D004591 ORTHO05D005749 1.3e-07 59.3 62 51.6
arahy.Tifrunner.gnm1.ann1.7AW5Q0 Arachis hypogaea HOM05D004591 ORTHO05D005749 1.7e-07 58.9 62 53.2
arahy.Tifrunner.gnm1.ann1.Q8N8UE Arachis hypogaea HOM05D004591 ORTHO05D005749 1.7e-07 58.9 62 53.2
C03p10420 Brassica napus HOM05D004591 ORTHO05D005749 1.7e-07 58.9 62 51.6
Carub.0006s1686 Capsella rubella HOM05D004591 ORTHO05D005749 1.7e-07 58.9 62 51.6
Gohir.D10G168300 Gossypium hirsutum HOM05D004591 ORTHO05D005749 1.7e-07 58.9 62 54.8
Sp6g25750 Schrenkiella parvula HOM05D004591 ORTHO05D005749 3.8e-07 57.8 62 50.0
Gohir.A10G161800 Gossypium hirsutum HOM05D004591 ORTHO05D005749 5.0e-07 57.4 62 53.2
Gorai.011G187900 Gossypium raimondii HOM05D004591 ORTHO05D005749 5.0e-07 57.4 62 53.2
AT5G18580 Arabidopsis thaliana HOM05D004591 ORTHO05D005749 8.6e-07 56.6 62 51.6
Medtr4g119230 Medicago truncatula HOM05D004591 ORTHO05D005749 1.5e-06 55.8 62 50.0
CBR_g7999 Chara braunii HOM05D004591 ORTHO05D005749 2.5e-06 55.1 70 45.7
MD16G1173200 Malus domestica HOM05D004591 ORTHO05D005749 5.5e-06 53.9 62 46.8
CANSAT78G2472 Cannabis sativa HOM05D004591 ORTHO05D005749 7.2e-06 53.5 62 50.0


User provided reference genes

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