Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02285 Nelumbo nucifera HOM05D003848 ORTHO05D004616 3.5e-229 798.5 590 100.0
TAR369G1095 Trochodendron aralioides HOM05D003848 ORTHO05D004616 3.8e-103 379.8 564 67.2
TAR633G0718 Trochodendron aralioides HOM05D003848 ORTHO05D004616 3.2e-102 376.7 571 69.5
GSVIVG01001165001 Vitis vinifera HOM05D003848 ORTHO05D004616 2.5e-94 350.5 548 59.7
MBI07_g03188_MAGBIO Magnolia biondii HOM05D003848 ORTHO05D004616 7.2e-94 349.0 587 54.2
CiPaw.08G106300 Carya illinoinensis HOM05D003848 ORTHO05D004616 3.0e-92 343.6 548 59.5
Dinv32920 Davidia involucrata HOM05D003848 ORTHO05D004616 7.0e-89 332.4 444 67.1
Aqoxy2G03377 Aquilegia oxysepala HOM05D003848 ORTHO05D004616 4.5e-88 329.7 568 57.6
Hma1.2p1_0822F.1_g224390 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 8.6e-87 325.5 559 55.3
Cpa.g.sc52.49 Carica papaya HOM05D003848 ORTHO05D004616 9.5e-86 322.0 548 65.3
Actinidia24902 Actinidia chinensis HOM05D003848 ORTHO05D004616 2.1e-85 320.9 559 60.6
COL.COLO4_09072 Corchorus olitorius HOM05D003848 ORTHO05D004616 1.2e-83 315.1 565 47.8
Thecc.01G276600 Theobroma cacao HOM05D003848 ORTHO05D004616 2.6e-83 313.9 571 60.9
Cfa006159 Carpinus fangiana HOM05D003848 ORTHO05D004616 3.4e-83 313.5 551 57.2
Oeu041715.2 Olea europaea HOM05D003848 ORTHO05D004616 3.4e-83 313.5 546 54.6
Glyma.10G027400 Glycine max HOM05D003848 ORTHO05D004616 5.7e-83 312.8 542 63.7
VMungo0720G2447 Vigna mungo HOM05D003848 ORTHO05D004616 9.8e-83 312.0 550 59.5
Potri.002G051500 Populus trichocarpa HOM05D003848 ORTHO05D004616 1.3e-82 311.6 550 62.4
Cfa003508 Carpinus fangiana HOM05D003848 ORTHO05D004616 1.7e-82 311.2 549 57.2
Glyma.02G146600 Glycine max HOM05D003848 ORTHO05D004616 1.7e-82 311.2 543 63.7
Gorai.008G004000 Gossypium raimondii HOM05D003848 ORTHO05D004616 3.7e-82 310.1 595 63.0
Lj2C1116T3 Lonicera japonica HOM05D003848 ORTHO05D004616 3.7e-82 310.1 542 63.7
Gohir.A12G004500 Gossypium hirsutum HOM05D003848 ORTHO05D004616 4.9e-82 309.7 595 59.7
Psat4g156760 Pisum sativum HOM05D003848 ORTHO05D004616 6.4e-82 309.3 543 61.3
Phvul.007G172800 Phaseolus vulgaris HOM05D003848 ORTHO05D004616 8.3e-82 308.9 542 61.4
Gohir.D12G004200 Gossypium hirsutum HOM05D003848 ORTHO05D004616 1.4e-81 308.1 595 63.2
Haze_16066 Corylus avellana HOM05D003848 ORTHO05D004616 1.8e-81 307.8 549 58.7
Lj1C175T4 Lonicera japonica HOM05D003848 ORTHO05D004616 7.0e-81 305.8 545 62.2
arahy.Tifrunner.gnm1.ann1.X3NAFX Arachis hypogaea HOM05D003848 ORTHO05D004616 9.2e-81 305.4 560 61.6
arahy.Tifrunner.gnm1.ann1.ARWK2P Arachis hypogaea HOM05D003848 ORTHO05D004616 2.7e-80 303.9 552 61.4
vmacro19513 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 7.8e-80 302.4 559 59.0
MELO3C009735.2 Cucumis melo HOM05D003848 ORTHO05D004616 3.0e-79 300.4 551 63.5
Prupe.8G239200 Prunus persica HOM05D003848 ORTHO05D004616 3.0e-79 300.4 587 56.0
Sabra05G0161100 Salix brachista HOM05D003848 ORTHO05D004616 3.9e-79 300.1 551 59.3
HPP92_009020 Vanilla planifolia HOM05D003848 ORTHO05D004616 5.0e-79 299.7 479 50.5
TWI59G1147 Tripterygium wilfordii HOM05D003848 ORTHO05D004616 6.6e-79 299.3 536 63.4
Manes.05G077600 Manihot esculenta HOM05D003848 ORTHO05D004616 1.1e-78 298.5 556 58.1
PSO832G2619 Papaver somniferum HOM05D003848 ORTHO05D004616 1.5e-78 298.1 591 59.6
Lj5g0005692 Lotus japonicus HOM05D003848 ORTHO05D004616 1.9e-78 297.7 538 57.8
Nitab4.5_0005156g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 4.3e-78 296.6 467 62.5
Nitab4.5_0006700g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 1.2e-77 295.0 466 66.7
Oeu028073.1 Olea europaea HOM05D003848 ORTHO05D004616 1.2e-77 295.0 558 55.7
Lalb_Chr06g0162931 Lupinus albus HOM05D003848 ORTHO05D004616 2.8e-77 293.9 469 66.5
QL01p012613 Quercus lobata HOM05D003848 ORTHO05D004616 2.8e-77 293.9 544 57.2
SGA_v2.0_scaffold1G00491 Striga asiatica HOM05D003848 ORTHO05D004616 2.8e-77 293.9 543 62.1
CDE06G2067 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 3.6e-77 293.5 517 55.7
CsaV3_3G039920 Cucumis sativus L. HOM05D003848 ORTHO05D004616 3.6e-77 293.5 551 63.7
CAN.G439.4 Capsicum annuum HOM05D003848 ORTHO05D004616 6.2e-77 292.7 546 52.9
HanXRQChr01g0002971 Helianthus annuus HOM05D003848 ORTHO05D004616 6.2e-77 292.7 468 66.0
Ca_09749_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 8.0e-77 292.4 539 67.9
Haze_04691 Corylus avellana HOM05D003848 ORTHO05D004616 8.0e-77 292.4 556 57.4
Solyc11g071660.1 Solanum lycopersicum HOM05D003848 ORTHO05D004616 8.0e-77 292.4 565 57.3
Cc00_g04130 Coffea canephora HOM05D003848 ORTHO05D004616 1.8e-76 291.2 518 59.3
Cc01_g10690 Coffea canephora HOM05D003848 ORTHO05D004616 2.3e-76 290.8 618 54.7
Sopen11g029330 Solanum pennellii HOM05D003848 ORTHO05D004616 4.0e-76 290.0 568 56.0
PGSC0003DMG400046756 Solanum tuberosum HOM05D003848 ORTHO05D004616 4.0e-76 290.0 568 58.8
vmacro18863 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 1.2e-75 288.5 553 59.0
RcHm_v2.0_Chr4g0409951 Rosa chinensis HOM05D003848 ORTHO05D004616 1.5e-75 288.1 555 58.9
PSO210G3188 Papaver somniferum HOM05D003848 ORTHO05D004616 2.0e-75 287.7 579 55.1
PGR119G0967 Punica granatum HOM05D003848 ORTHO05D004616 2.0e-75 287.7 559 67.1
TPR.G28157 Trifolium pratense HOM05D003848 ORTHO05D004616 2.0e-75 287.7 169 87.0
Atru.chr5.1462 Acer truncatum HOM05D003848 ORTHO05D004616 2.6e-75 287.3 548 56.8
FAN07G0259 Fragaria x ananassa HOM05D003848 ORTHO05D004616 3.4e-75 287.0 570 59.6
SHI27493 Sapria himalayana HOM05D004058 ORTHO05D001984 9.8e-75 285.4 163 86.5
THA.LOC104825995 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 1.3e-74 285.0 165 87.9
FvH4_4g12190 Fragaria vesca HOM05D003848 ORTHO05D004616 2.9e-74 283.9 571 58.8
THA.LOC104801238 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 2.9e-74 283.9 452 68.8
MSTRG.21553 Avicennia marina HOM05D003848 ORTHO05D004616 3.7e-74 283.5 557 54.8
Ciclev10019827m.g Citrus clementina HOM05D003848 ORTHO05D004616 3.7e-74 283.5 537 61.1
MD11G1283600 Malus domestica HOM05D003848 ORTHO05D004616 3.7e-74 283.5 572 60.0
Medtr8g028640 Medicago truncatula HOM05D003848 ORTHO05D004616 6.4e-74 282.7 555 61.3
Sc24g0003320 Simmondsia chinensis HOM05D003848 ORTHO05D004616 6.4e-74 282.7 556 59.2
SEGI_20713 Sequoiadendron giganteum HOM05D003848 ORTHO05D004616 8.3e-74 282.3 172 84.9
ClCG10G016420 Citrullus lanatus HOM05D003848 ORTHO05D004616 1.1e-73 282.0 547 62.5
FAN17G2080 Fragaria x ananassa HOM05D003848 ORTHO05D004616 5.4e-73 279.6 556 59.5
Potri.005G210900 Populus trichocarpa HOM05D003848 ORTHO05D004616 7.0e-73 279.3 544 58.6
FAN22G1557 Fragaria x ananassa HOM05D003848 ORTHO05D004616 9.2e-73 278.9 175 80.6
Migut.D00312 Erythranthe guttata HOM05D003848 ORTHO05D004616 1.6e-72 278.1 454 64.8
ECA248G3600 Erigeron canadensis HOM05D003848 ORTHO05D004616 2.0e-72 277.7 484 59.7
CANSAT01G1819 Cannabis sativa HOM05D003848 ORTHO05D004616 2.7e-72 277.3 161 87.6
ATR0824G270 Amborella trichopoda HOM05D003848 ORTHO05D004616 1.0e-71 275.4 546 51.6
MD03G1262900 Malus domestica HOM05D003848 ORTHO05D004616 1.0e-71 275.4 562 58.5
Peaxi162Scf00217g00025 Petunia axillaris HOM05D003848 ORTHO05D004616 3.0e-71 273.9 550 58.7
ATR0332G007 Amborella trichopoda HOM05D003848 ORTHO05D004616 8.6e-71 272.3 603 51.7
Rhsim01G0273900 Rhododendron simsii HOM05D003848 ORTHO05D004616 1.9e-70 271.2 588 54.9
Aa31LG5G2360 Aethionema arabicum HOM05D003848 ORTHO05D004616 3.3e-70 270.4 450 67.1
unitig_0.g1040 Utricularia gibba HOM05D003848 ORTHO05D004616 5.6e-70 269.6 553 46.8
AagrBONN_evm.TU.Sc2ySwM_362.1784 Anthoceros agrestis HOM05D003848 ORTHO05D004616 4.7e-69 266.5 171 80.7
Zm00001eb314820 Zea mays HOM05D003848 ORTHO05D004616 6.2e-69 266.2 442 63.1
Mapoly0051s0007 Marchantia polymorpha HOM05D003848 ORTHO05D004616 6.8e-68 262.7 164 80.5
Sed0011367 Sechium edule HOM05D003848 ORTHO05D004616 6.8e-68 262.7 542 57.0
Thhalv10028691m.g Eutrema salsugineum HOM05D003848 ORTHO05D004616 4.4e-67 260.0 448 66.7
Ah.02g110950 Amaranthus hybridus HOM05D003848 ORTHO05D004616 7.5e-67 259.2 172 80.8
Carub.0006s3439 Capsella rubella HOM05D003848 ORTHO05D004616 9.9e-67 258.8 451 66.3
DCAR_000720 Daucus carota HOM05D003848 ORTHO05D004616 9.9e-67 258.8 498 59.6
Manes.01G206800 Manihot esculenta HOM05D003848 ORTHO05D004616 4.9e-66 256.5 537 50.1
BcaC01g01560 Brassica carinata HOM05D003848 ORTHO05D004616 8.3e-66 255.8 169 76.3
AL6G50290 Arabidopsis lyrata HOM05D003848 ORTHO05D004616 1.1e-65 255.4 452 65.0
AT4G02720 Arabidopsis thaliana HOM05D003848 ORTHO05D004616 1.4e-65 255.0 452 65.3
SMO231G0049 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 1.4e-65 255.0 180 75.0
Hund11854 Selenicereus undatus HOM05D003848 ORTHO05D004616 1.4e-65 255.0 165 80.6
AUR62017852 Chenopodium quinoa HOM05D003848 ORTHO05D004616 1.9e-65 254.6 170 77.1
BcaB01g02014 Brassica carinata HOM05D003848 ORTHO05D004616 2.4e-65 254.2 449 55.7
CARHR251050 Cardamine hirsuta HOM05D003848 ORTHO05D004616 2.4e-65 254.2 170 77.1
AagrBONN_evm.TU.Sc2ySwM_344.5133 Anthoceros agrestis HOM05D003848 ORTHO05D004616 4.1e-65 253.4 154 84.4
Pp3c9_17960 Physcomitrium patens HOM05D003848 ORTHO05D004616 4.1e-65 253.4 159 78.6
CBR_g4136 Chara braunii HOM05D003848 ORTHO05D004616 7.1e-65 252.7 165 77.6
AUR62003538 Chenopodium quinoa HOM05D003848 ORTHO05D004616 7.1e-65 252.7 167 77.8
SMO351G0411 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 7.1e-65 252.7 168 77.4
C03p93080 Brassica napus HOM05D003848 ORTHO05D004616 1.6e-64 251.5 170 75.9
Lsat_1_v5_gn_5_184160 Lactuca sativa HOM05D003848 ORTHO05D004616 2.1e-64 251.1 576 55.0
Sp6g02650 Schrenkiella parvula HOM05D003848 ORTHO05D004616 2.1e-64 251.1 448 65.8
FAN22G0164 Fragaria x ananassa HOM05D003848 ORTHO05D004616 7.8e-64 249.2 524 60.7
EL10Ac5g10556 Beta vulgaris HOM05D003848 ORTHO05D004616 1.0e-63 248.8 546 59.7
Duzib177G1090 Durio zibethinus HOM05D003848 ORTHO05D004616 5.1e-63 246.5 176 75.0
C03p93150 Brassica napus HOM05D003848 ORTHO05D004616 6.2e-61 239.6 155 78.7
A09p02120 Brassica napus HOM05D003848 ORTHO05D004616 1.1e-60 238.8 135 85.9
BraA09t35861Z Brassica rapa HOM05D003848 ORTHO05D004616 1.1e-60 238.8 135 85.9
C08p37610 Brassica napus HOM05D003848 ORTHO05D004616 3.1e-60 237.3 134 85.8
BcaC01g01554 Brassica carinata HOM05D003848 ORTHO05D004616 1.5e-59 235.0 133 85.7
C03p93070 Brassica napus HOM05D003848 ORTHO05D004616 4.4e-59 233.4 132 86.4
C09p02220 Brassica napus HOM05D003848 ORTHO05D004616 5.8e-59 233.0 163 74.8
BolC8t51344H Brassica oleracea HOM05D003848 ORTHO05D004616 9.9e-59 232.3 452 52.7
C03p93100 Brassica napus HOM05D003848 ORTHO05D004616 1.3e-58 231.9 133 85.0
BolC9t53150H Brassica oleracea HOM05D003848 ORTHO05D004616 2.2e-58 231.1 448 53.8
BolC3t21610H Brassica oleracea HOM05D003848 ORTHO05D004616 4.9e-58 229.9 126 88.1
BcaC01g01558 Brassica carinata HOM05D003848 ORTHO05D004616 8.4e-58 229.2 132 84.8
A09p54740 Brassica napus HOM05D003848 ORTHO05D004616 2.4e-57 227.6 129 86.0
BolC3t21613H Brassica oleracea HOM05D003848 ORTHO05D004616 5.4e-57 226.5 133 82.7
BcaC04g24009 Brassica carinata HOM05D003848 ORTHO05D004616 1.2e-56 225.3 447 52.8
C09p02210 Brassica napus HOM05D003848 ORTHO05D004616 1.6e-56 224.9 129 85.3
BraA04t17534Z Brassica rapa HOM05D003848 ORTHO05D004616 2.1e-56 224.6 170 72.4
A09p30470 Brassica napus HOM05D003848 ORTHO05D004616 6.0e-56 223.0 132 82.6
TPR.G23082 Trifolium pratense HOM05D003848 ORTHO05D004616 1.3e-55 221.9 135 85.2
A04p19390 Brassica napus HOM05D003848 ORTHO05D004616 2.3e-55 221.1 164 73.2
BcaC01g01561 Brassica carinata HOM05D003848 ORTHO05D004616 3.0e-55 220.7 130 83.1
CDE07G1463 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 8.7e-55 219.2 166 70.5
BcaC02g08380 Brassica carinata HOM05D003848 ORTHO05D004616 4.3e-54 216.9 164 70.7
Rhsim10G0030500 Rhododendron simsii HOM05D003848 ORTHO05D004616 5.6e-54 216.5 138 79.0
QL03p072399 Quercus lobata HOM05D003848 ORTHO05D004616 9.6e-54 215.7 585 42.9
C04p54970 Brassica napus HOM05D003848 ORTHO05D004616 2.8e-53 214.2 160 71.9
BolC4t27032H Brassica oleracea HOM05D003848 ORTHO05D004616 2.8e-53 214.2 160 71.9
SalBow4G2167 Salvia bowleyana HOM05D003848 ORTHO05D004616 3.9e-47 193.7 161 63.4
Ca_04836_v3 Cicer arietinum L. HOM05D001515 ORTHO05D004616 5.6e-46 189.9 112 84.8
Nn4g26302 Nelumbo nucifera HOM05D003848 ORTHO05D004616 2.1e-45 188.0 100 93.0
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 1.5e-43 181.8 422 57.6
C03p93140 Brassica napus HOM05D003848 ORTHO05D004616 5.8e-43 179.9 121 78.5
SGA_v2.0_scaffold138G35328 Striga asiatica HOM05D003848 ORTHO05D004616 9.9e-43 179.1 152 63.8
BcaC03g13677 Brassica carinata HOM05D003848 ORTHO05D004616 1.9e-41 174.9 132 70.5
Oeu017054.1 Olea europaea HOM05D004271 ORTHO05D006011 7.9e-40 169.5 139 70.5
BcaC03g16168 Brassica carinata HOM05D003848 ORTHO05D004616 1.5e-38 165.2 103 77.7
MCO02G035 Micromonas commoda HOM05D003848 ORTHO05D004616 1.5e-38 165.2 106 78.3
Hma1.2p1_0667F.1_g199770 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 6.2e-37 159.8 93 86.0
PRCOL_00001828 Prasinoderma coloniale HOM05D003848 ORTHO05D004616 2.2e-34 151.4 105 70.5
Cre01.g032250 Chlamydomonas reinhardtii HOM05D003848 ORTHO05D004616 2.1e-32 144.8 100 68.0
BraA09t40884Z Brassica rapa HOM05D003848 ORTHO05D004616 2.3e-31 141.4 84 81.0
BraA09t38617Z Brassica rapa HOM05D003848 ORTHO05D004616 1.5e-30 138.7 84 79.8
Os09g0455400 Oryza sativa ssp. japonica HOM05D003848 ORTHO05D004616 4.3e-30 137.1 71 95.8
Actinidia21120 Actinidia chinensis HOM05D003848 ORTHO05D004616 5.6e-30 136.7 169 49.7
Haze_27548 Corylus avellana HOM05D003848 ORTHO05D004616 8.2e-29 132.9 138 49.3
C02p39120 Brassica napus HOM05D003848 ORTHO05D004616 5.8e-27 126.7 85 71.8
BolC2t09922H Brassica oleracea HOM05D003848 ORTHO05D004616 1.7e-26 125.2 85 70.6
FAN22G1718 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.1e-22 112.5 447 55.3
BNapus_Darmor_BZH_scaffold_38p02440 Brassica napus HOM05D003848 ORTHO05D004616 1.9e-22 111.7 68 79.4
Lj1A173G45 Lonicera japonica HOM05D003848 ORTHO05D004616 7.4e-22 109.8 169 44.4
BNapus_Darmor_BZH_scaffold_38p02460 Brassica napus HOM05D003848 ORTHO05D004616 9.7e-22 109.4 67 79.1
unitig_0.g1042 Utricularia gibba HOM05D003848 ORTHO05D004616 6.3e-21 106.7 65 78.5
vmacro19512 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 3.1e-20 104.4 477 44.0
BolC2t06954H Brassica oleracea HOM05D003848 ORTHO05D004616 2.0e-19 101.7 68 75.0
Ca_05843_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 1.7e-18 98.6 54 90.7
MD07G1100600 Malus domestica HOM05D003848 ORTHO05D004616 2.9e-18 97.8 56 87.5
Prupe.6G167600 Prunus persica HOM05D003848 ORTHO05D004616 2.7e-16 91.3 56 82.1
FAN22G0082 Fragaria x ananassa HOM05D003848 ORTHO05D035678 8.2e-13 79.7 179 43.6
BcaC01g01557 Brassica carinata HOM05D003848 ORTHO05D004616 1.2e-11 75.9 63 61.9
C03p93060 Brassica napus HOM05D003848 ORTHO05D004616 8.5e-10 69.7 88 51.1
BolC3t21614H Brassica oleracea HOM05D003848 ORTHO05D004616 3.6e-08 64.3 49 65.3
BraA09t40883Z Brassica rapa HOM05D003848 ORTHO05D004616 5.1e-07 60.5 85 47.1


User provided reference genes

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