Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02205 Nelumbo nucifera HOM05D008687 ORTHO05D010822 2.6e-21 104.4 50 100.0
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 1.8e-09 65.1 33 93.9
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 2.6e-08 61.2 33 81.8
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 3.3e-08 60.8 33 84.8
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 3.3e-08 60.8 41 65.9
Cc02_g39090 Coffea canephora HOM05D008687 ORTHO05D010822 5.7e-08 60.1 34 79.4
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 9.7e-08 59.3 33 84.8
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 1.3e-07 58.9 33 75.8
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 1.7e-07 58.5 45 60.0
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 1.7e-07 58.5 33 81.8
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 2.8e-07 57.8 33 78.8
FAN10G1050 Fragaria x ananassa HOM05D036424 ORTHO05D010822 6.3e-07 56.6 34 73.5
FAN10G4301 Fragaria x ananassa HOM05D036424 ORTHO05D010822 6.3e-07 56.6 34 73.5
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 8.2e-07 56.2 33 75.8
SalBow3G0692 Salvia bowleyana HOM05D008687 ORTHO05D010822 8.2e-07 56.2 36 69.4
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 1.1e-06 55.8 33 75.8
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 1.1e-06 55.8 44 63.6
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 1.4e-06 55.5 33 72.7
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 1.4e-06 55.5 33 72.7
FAN03G1283 Fragaria x ananassa HOM05D008687 ORTHO05D010822 3.1e-06 54.3 33 72.7
FAN06G2082 Fragaria x ananassa HOM05D036424 ORTHO05D010822 3.1e-06 54.3 33 72.7
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 3.1e-06 54.3 33 72.7
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 5.3e-06 53.5 32 75.0
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 5.3e-06 53.5 33 69.7
unitig_52.g17066 Utricularia gibba HOM05D008687 ORTHO05D010822 5.3e-06 53.5 38 57.9
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 7.0e-06 53.1 43 58.1
Gorai.001G156200 Gossypium raimondii HOM05D008687 ORTHO05D010822 7.0e-06 53.1 37 64.9
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 7.0e-06 53.1 33 69.7
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 9.1e-06 52.8 33 69.7


User provided reference genes

Program Settings