Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02098 Nelumbo nucifera HOM05D000875 ORTHO05D000684 1.3e-64 249.6 132 100.0
Nn6g35235 Nelumbo nucifera HOM05D000875 ORTHO05D000684 6.7e-32 141.0 177 53.1
Nn2g13840 Nelumbo nucifera HOM05D000875 ORTHO05D000684 3.2e-26 122.1 177 46.9
TWI79G0879 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 6.1e-17 91.3 157 38.2
QL01p015125 Quercus lobata HOM05D000875 ORTHO05D000684 1.0e-16 90.5 157 41.4
CiPaw.13G123100 Carya illinoinensis HOM05D000875 ORTHO05D000684 1.4e-16 90.1 157 39.5
QL01p015218 Quercus lobata HOM05D000875 ORTHO05D000684 3.0e-16 89.0 157 40.8
Cfa010295 Carpinus fangiana HOM05D000875 ORTHO05D000684 3.9e-16 88.6 156 42.9
Haze_23711 Corylus avellana HOM05D000875 ORTHO05D000684 3.9e-16 88.6 139 46.0
MD00G1165800 Malus domestica HOM05D000875 ORTHO05D000684 3.9e-16 88.6 177 35.6
MD03G1127100 Malus domestica HOM05D000875 ORTHO05D000684 3.9e-16 88.6 177 35.6
MD11G1147800 Malus domestica HOM05D000875 ORTHO05D000684 1.5e-15 86.7 177 36.7
CSS0044092 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 5.7e-15 84.7 158 36.7
Nn3g19074 Nelumbo nucifera HOM05D000875 ORTHO05D000684 9.7e-15 84.0 43 90.7
Potri.009G005800 Populus trichocarpa HOM05D000875 ORTHO05D000684 2.2e-14 82.8 157 40.1
CSS0045254 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 6.3e-14 81.3 158 35.4
DCAR_015507 Daucus carota HOM05D000875 ORTHO05D000684 8.2e-14 80.9 134 38.8
Nn2g15169 Nelumbo nucifera HOM05D000875 ORTHO05D000684 8.2e-14 80.9 117 46.2
Sabra09G0003100 Salix brachista HOM05D000875 ORTHO05D000684 8.2e-14 80.9 157 36.3
TAR623G0289 Trochodendron aralioides HOM05D000875 ORTHO05D000684 8.2e-14 80.9 149 41.6
Cpa.g.sc476.3 Carica papaya HOM05D000875 ORTHO05D000684 1.1e-13 80.5 157 35.7
Prupe.6G112400 Prunus persica HOM05D000875 ORTHO05D000684 1.8e-13 79.7 140 43.6
PGR119G1829 Punica granatum HOM05D000875 ORTHO05D000684 1.8e-13 79.7 157 36.9
Potri.004G216200 Populus trichocarpa HOM05D000875 ORTHO05D000684 2.4e-13 79.3 157 40.1
Dinv29377 Davidia involucrata HOM05D000875 ORTHO05D000684 4.1e-13 78.6 142 38.0
TWI75G1353 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 7.0e-13 77.8 177 33.3
vmacro14394 Vaccinium macrocarpon HOM05D000875 ORTHO05D000684 7.0e-13 77.8 158 34.2
PGR119G1253 Punica granatum HOM05D000875 ORTHO05D000684 9.1e-13 77.4 157 36.9
CANSAT25G2534 Cannabis sativa HOM05D000875 ORTHO05D000684 1.2e-12 77.0 158 39.2
Aqoxy2G01668 Aquilegia oxysepala HOM05D000875 ORTHO05D000684 2.0e-12 76.3 176 35.2
Sabra04G0147100 Salix brachista HOM05D000875 ORTHO05D000684 2.6e-12 75.9 157 36.9
Gohir.A03G029200 Gossypium hirsutum HOM05D000875 ORTHO05D000684 3.5e-12 75.5 161 36.6
Gohir.D03G139400 Gossypium hirsutum HOM05D000875 ORTHO05D000684 3.5e-12 75.5 161 36.6
Gorai.003G146100 Gossypium raimondii HOM05D000875 ORTHO05D000684 3.5e-12 75.5 161 36.6
Manes.11G152200 Manihot esculenta HOM05D000875 ORTHO05D000684 3.5e-12 75.5 157 36.9
PSO339G6584 Papaver somniferum HOM05D000875 ORTHO05D000684 3.5e-12 75.5 143 42.0
Oeu008358.1 Olea europaea HOM05D000875 ORTHO05D000684 5.9e-12 74.7 141 35.5
Oeu008359.1 Olea europaea HOM05D000875 ORTHO05D000684 5.9e-12 74.7 141 35.5
FAN21G1138 Fragaria x ananassa HOM05D000875 ORTHO05D000684 7.7e-12 74.3 157 37.6
PSO801G0239 Papaver somniferum HOM05D000875 ORTHO05D000684 7.7e-12 74.3 143 41.3
AUR62014960 Chenopodium quinoa HOM05D000875 ORTHO05D000684 1.0e-11 73.9 156 35.3
Actinidia03693 Actinidia chinensis HOM05D000875 ORTHO05D000684 1.3e-11 73.6 158 32.9
MSTRG.17760 Avicennia marina HOM05D000875 ORTHO05D000684 1.3e-11 73.6 141 34.8
AUR62029174 Chenopodium quinoa HOM05D000875 ORTHO05D000684 1.3e-11 73.6 156 34.6
Oeu007311.1 Olea europaea HOM05D000875 ORTHO05D000684 1.3e-11 73.6 149 34.9
Cc01_g10330 Coffea canephora HOM05D000875 ORTHO05D000684 1.7e-11 73.2 142 39.4
Oeu000600.1 Olea europaea HOM05D000875 ORTHO05D000684 2.2e-11 72.8 178 30.3
Rhsim01G0211000 Rhododendron simsii HOM05D000875 ORTHO05D000684 2.2e-11 72.8 158 36.1
Thecc.09G350900 Theobroma cacao HOM05D000875 ORTHO05D000684 2.2e-11 72.8 161 36.6
Dinv16218 Davidia involucrata HOM05D000875 ORTHO05D000684 2.9e-11 72.4 158 36.1
Migut.N02545 Erythranthe guttata HOM05D000875 ORTHO05D000684 2.9e-11 72.4 135 38.5
FvH4_3g30680 Fragaria vesca HOM05D000875 ORTHO05D000684 6.5e-11 71.2 157 40.1
FAN11G1500 Fragaria x ananassa HOM05D000875 ORTHO05D000684 6.5e-11 71.2 157 40.1
FAN25G2615 Fragaria x ananassa HOM05D000875 ORTHO05D000684 8.5e-11 70.9 157 40.1
MSTRG.18700 Avicennia marina HOM05D000875 ORTHO05D000684 1.9e-10 69.7 141 33.3
Nn1g03758 Nelumbo nucifera HOM05D000875 ORTHO05D276634 2.5e-10 69.3 37 86.5
Ciclev10028190m.g Citrus clementina HOM05D000875 ORTHO05D000684 4.2e-10 68.6 159 35.8
COL.COLO4_11103 Corchorus olitorius HOM05D000875 ORTHO05D000684 4.2e-10 68.6 164 40.2
TWI31G0905 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 4.2e-10 68.6 157 36.3
Duzib150G0456 Durio zibethinus HOM05D000875 ORTHO05D000684 5.5e-10 68.2 145 36.6
Lj2A1008T37 Lonicera japonica HOM05D000875 ORTHO05D000684 5.5e-10 68.2 182 34.1
Glyma.12G178300 Glycine max HOM05D000875 ORTHO05D000684 7.2e-10 67.8 57 59.6
FAN16G0875 Fragaria x ananassa HOM05D000875 ORTHO05D000684 9.4e-10 67.4 157 39.5
EL10Ac9g22614 Beta vulgaris HOM05D000875 ORTHO05D000684 2.1e-09 66.2 160 32.5
Lj3g0006705 Lotus japonicus HOM05D000875 ORTHO05D000684 2.7e-09 65.9 57 57.9
Lalb_Chr24g0394921 Lupinus albus HOM05D000875 ORTHO05D000684 2.7e-09 65.9 157 34.4
unitig_22.g6653 Utricularia gibba HOM05D000875 ORTHO05D000684 6.1e-09 64.7 137 33.6
Duzib170G1168 Durio zibethinus HOM05D000875 ORTHO05D000684 8.0e-09 64.3 161 34.2
arahy.Tifrunner.gnm1.ann1.62L8X5 Arachis hypogaea HOM05D000875 ORTHO05D000684 1.4e-08 63.5 60 56.7
CSS0010484 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 2.3e-08 62.8 162 35.8
Eucgr.J00387 Eucalyptus grandis HOM05D000875 ORTHO05D000684 2.3e-08 62.8 157 35.7
HanXRQChr02g0055531 Helianthus annuus HOM05D000875 ORTHO05D000684 2.3e-08 62.8 152 34.2
Lj2A1008T36 Lonicera japonica HOM05D000875 ORTHO05D000684 2.3e-08 62.8 142 37.3
Aa31LG5G7990 Aethionema arabicum HOM05D000875 ORTHO05D000684 3.0e-08 62.4 159 34.0
arahy.Tifrunner.gnm1.ann1.KRI533 Arachis hypogaea HOM05D000875 ORTHO05D000684 3.0e-08 62.4 60 55.0
Ca_01708_v3 Cicer arietinum L. HOM05D000875 ORTHO05D000684 3.0e-08 62.4 159 34.6
Phvul.005G130600 Phaseolus vulgaris HOM05D000875 ORTHO05D000684 5.2e-08 61.6 94 39.4
Lj1A211T42 Lonicera japonica HOM05D000875 ORTHO05D000684 6.7e-08 61.2 145 32.4
Psat5g253440 Pisum sativum HOM05D000875 ORTHO05D000684 8.8e-08 60.8 94 41.5
TPR.G21027 Trifolium pratense HOM05D000875 ORTHO05D000684 8.8e-08 60.8 57 56.1
TAR369G1022 Trochodendron aralioides HOM05D000875 ORTHO05D000684 8.8e-08 60.8 89 42.7
Psat7g191240 Pisum sativum HOM05D000875 ORTHO05D000684 1.2e-07 60.5 67 50.7
Glyma.13G322200 Glycine max HOM05D000875 ORTHO05D000684 1.5e-07 60.1 55 61.8
Glyma.11G193000 Glycine max HOM05D000875 ORTHO05D000684 2.6e-07 59.3 67 49.3
Glyma.12G081000 Glycine max HOM05D000875 ORTHO05D000684 2.6e-07 59.3 67 50.7
Medtr4g057330 Medicago truncatula HOM05D000875 ORTHO05D000684 2.6e-07 59.3 74 47.3
THA.LOC104800576 Tarenaya hassleriana HOM05D000875 ORTHO05D000684 2.6e-07 59.3 158 32.3
MELO3C026950.2 Cucumis melo HOM05D000875 ORTHO05D000684 4.4e-07 58.5 83 45.8
Hma1.2p1_0051F.1_g029430 Hydrangea macrophylla HOM05D000875 ORTHO05D000684 4.4e-07 58.5 161 36.0
Nitab4.5_0004414g0030 Nicotiana tabacum HOM05D000875 ORTHO05D000684 4.4e-07 58.5 62 46.8
Nitab4.5_0028110g0010 Nicotiana tabacum HOM05D000875 ORTHO05D000684 4.4e-07 58.5 62 46.8
Peaxi162Scf00983g00415 Petunia axillaris HOM05D000875 ORTHO05D000684 4.4e-07 58.5 57 50.9
Ca_19319_v3 Cicer arietinum L. HOM05D000875 ORTHO05D000684 7.5e-07 57.8 74 45.9
Medtr2g084275 Medicago truncatula HOM05D000875 ORTHO05D000684 7.5e-07 57.8 57 52.6
THA.LOC104816072 Tarenaya hassleriana HOM05D000875 ORTHO05D000684 7.5e-07 57.8 163 31.9
ClCG02G021560 Citrullus lanatus HOM05D000875 ORTHO05D000684 9.7e-07 57.4 65 50.8
CsaV3_6G014330 Cucumis sativus L. HOM05D000875 ORTHO05D000684 9.7e-07 57.4 65 50.8
Solyc11g066380.3 Solanum lycopersicum HOM05D000875 ORTHO05D000684 9.7e-07 57.4 63 44.4
Sopen11g026130 Solanum pennellii HOM05D000875 ORTHO05D000684 9.7e-07 57.4 63 44.4
Atru.chr3.3522 Acer truncatum HOM05D000875 ORTHO05D000684 1.3e-06 57.0 65 53.8
Gohir.A08G201000 Gossypium hirsutum HOM05D000875 ORTHO05D000684 1.7e-06 56.6 90 43.3
Gohir.D08G218200 Gossypium hirsutum HOM05D000875 ORTHO05D000684 1.7e-06 56.6 90 43.3
Gorai.004G232000 Gossypium raimondii HOM05D000875 ORTHO05D000684 1.7e-06 56.6 90 43.3
Phvul.005G069000 Phaseolus vulgaris HOM05D000875 ORTHO05D000684 1.7e-06 56.6 67 50.7
Sed0017622 Sechium edule HOM05D000875 ORTHO05D000684 2.2e-06 56.2 65 50.8
TPR.G28209 Trifolium pratense HOM05D000875 ORTHO05D000684 2.8e-06 55.8 74 44.6
HPP92_025961 Vanilla planifolia HOM05D000875 ORTHO05D000684 4.8e-06 55.1 53 60.4
arahy.Tifrunner.gnm1.ann1.00K3B7 Arachis hypogaea HOM05D000875 ORTHO05D000684 6.3e-06 54.7 71 50.7
arahy.Tifrunner.gnm1.ann1.9K9ZRS Arachis hypogaea HOM05D000875 ORTHO05D000684 6.3e-06 54.7 71 50.7
HanXRQChr13g0396271 Helianthus annuus HOM05D000875 ORTHO05D000684 6.3e-06 54.7 127 33.9
Lalb_Chr01g0004581 Lupinus albus HOM05D000875 ORTHO05D000684 8.2e-06 54.3 74 44.6


User provided reference genes

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