Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 8.9e-156 553.5 271 100.0
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 1.2e-80 303.9 195 76.4
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 7.2e-73 278.1 195 69.7
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 4.7e-72 275.4 196 69.4
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 1.8e-71 273.5 198 69.7
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 1.8e-71 273.5 195 66.7
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 4.0e-71 272.3 195 67.7
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 8.8e-71 271.2 202 66.8
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 4.4e-70 268.9 195 65.6
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 5.7e-70 268.5 195 65.6
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 5.7e-70 268.5 195 65.6
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 7.5e-70 268.1 199 67.8
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 1.3e-69 267.3 191 65.4
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 1.7e-69 266.9 197 66.0
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 1.7e-69 266.9 197 68.5
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 2.4e-68 263.1 213 62.4
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 5.3e-68 261.9 194 68.0
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 9.1e-68 261.2 196 67.3
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 1.2e-67 260.8 184 67.9
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 1.2e-67 260.8 194 67.5
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 2.0e-67 260.0 195 65.1
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 3.5e-67 259.2 179 70.9
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 7.7e-67 258.1 195 67.2
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 1.0e-66 257.7 195 64.1
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 1.3e-66 257.3 195 65.1
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.2e-66 256.5 195 64.1
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 2.9e-66 256.1 195 65.1
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 1.1e-65 254.2 200 66.5
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 1.1e-65 254.2 203 64.0
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 1.5e-65 253.8 204 62.3
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 1.9e-65 253.4 205 62.9
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.9e-65 253.4 195 63.6
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 3.2e-65 252.7 191 63.4
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 7.2e-65 251.5 197 61.9
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 7.2e-65 251.5 201 63.7
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 7.2e-65 251.5 191 63.4
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 2.1e-64 250.0 197 62.4
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 3.6e-64 249.2 196 64.8
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 4.7e-64 248.8 190 65.3
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 6.1e-64 248.4 185 64.9
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 8.0e-64 248.1 190 64.7
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.0e-63 247.7 179 68.2
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.4e-63 247.3 187 66.8
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 2.3e-63 246.5 179 68.7
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 3.0e-63 246.1 181 68.0
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 4.0e-63 245.7 190 64.7
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 4.0e-63 245.7 180 67.2
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 3.4e-62 242.7 184 64.1
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 4.4e-62 242.3 167 70.1
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 5.7e-62 241.9 204 58.3
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 7.5e-62 241.5 209 59.3
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 9.8e-62 241.1 209 59.3
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 1.3e-61 240.7 155 75.5
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 4.8e-61 238.8 191 63.4
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 4.8e-61 238.8 188 62.8
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 4.8e-61 238.8 210 58.6
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 2.4e-60 236.5 193 59.1
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 4.1e-60 235.7 196 60.2
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 5.9e-59 231.9 196 58.2
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 5.9e-59 231.9 199 58.8
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 7.7e-59 231.5 226 52.7
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 3.8e-58 229.2 206 56.3
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 5.0e-58 228.8 200 58.0
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 6.6e-58 228.4 197 60.4
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 2.5e-57 226.5 184 61.4
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 4.2e-57 225.7 138 76.1
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 9.5e-57 224.6 180 61.1
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 9.5e-57 224.6 180 61.1
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 9.5e-57 224.6 200 56.0
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 1.2e-56 224.2 180 60.6
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 1.6e-56 223.8 279 47.0
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 2.1e-56 223.4 183 62.8
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 2.1e-56 223.4 203 57.6
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 3.6e-56 222.6 200 56.5
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 8.0e-56 221.5 203 53.2
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 8.0e-56 221.5 183 59.0
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 8.0e-56 221.5 192 58.9
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 1.4e-55 220.7 183 59.0
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 1.8e-55 220.3 197 55.8
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 1.8e-55 220.3 247 49.4
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 2.3e-55 219.9 179 59.2
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 3.0e-55 219.5 213 54.5
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 5.2e-55 218.8 212 51.9
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 5.2e-55 218.8 173 61.8
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 1.2e-54 217.6 187 57.8
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 1.5e-54 217.2 214 50.0
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 2.0e-54 216.9 182 58.8
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 3.4e-54 216.1 198 53.5
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 5.7e-54 215.3 173 59.5
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 5.7e-54 215.3 173 59.5
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 7.5e-54 214.9 167 61.7
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 9.8e-54 214.5 171 59.1
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 2.2e-53 213.4 206 53.4
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 2.2e-53 213.4 188 53.7
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 2.8e-53 213.0 183 57.9
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 2.8e-53 213.0 129 74.4
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 4.9e-53 212.2 183 57.9
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 6.3e-53 211.8 179 59.2
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 8.3e-53 211.5 183 56.8
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 8.3e-53 211.5 129 75.2
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 2.4e-52 209.9 193 56.0
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 2.4e-52 209.9 193 56.0
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 2.4e-52 209.9 197 53.8
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 9.2e-52 208.0 194 55.2
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 9.2e-52 208.0 194 55.2
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 3.5e-51 206.1 134 72.4
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 3.8e-50 202.6 222 51.8
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 3.8e-50 202.6 178 55.1
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 1.0e-47 194.5 198 48.5
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 4.0e-47 192.6 207 51.7
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 1.1e-44 184.5 143 65.0
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 1.6e-43 180.6 156 62.2
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 3.5e-43 179.5 219 44.3
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 2.3e-42 176.8 162 59.3
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 1.5e-33 147.5 191 44.0
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 2.7e-27 126.7 81 65.4
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 1.3e-26 124.4 86 65.1
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 6.6e-26 122.1 89 64.0
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 8.6e-26 121.7 189 38.6
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 8.1e-24 115.2 88 60.2
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 2.9e-21 106.7 160 38.1
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 2.1e-19 100.5 155 44.5
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 1.8e-15 87.4 134 35.8
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 9.3e-12 75.1 43 79.1
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 1.5e-09 67.8 155 32.3
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 2.5e-09 67.0 50 60.0
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 4.8e-08 62.8 39 61.5


User provided reference genes

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