Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02062 Nelumbo nucifera HOM05D001333 ORTHO05D001208 1.5e-18 95.1 46 100.0
Nn1g09521 Nelumbo nucifera HOM05D001333 ORTHO05D001208 8.3e-14 79.3 44 84.1
Atru.BG.102.p Acer truncatum HOM05D001333 ORTHO05D001208 9.2e-13 75.9 44 79.5
Haze_11168 Corylus avellana HOM05D001333 ORTHO05D001208 2.1e-12 74.7 44 77.3
TAR362G0202 Trochodendron aralioides HOM05D001333 ORTHO05D001208 2.1e-12 74.7 43 83.7
Prupe.7G267800 Prunus persica HOM05D001333 ORTHO05D001208 4.6e-12 73.6 44 79.5
Cfa008489 Carpinus fangiana HOM05D001333 ORTHO05D001208 6.0e-12 73.2 44 77.3
Dinv33227 Davidia involucrata HOM05D001333 ORTHO05D001208 6.0e-12 73.2 44 79.5
Eucgr.L00046 Eucalyptus grandis HOM05D001333 ORTHO05D001208 1.0e-11 72.4 43 72.1
FAN23G1775 Fragaria x ananassa HOM05D001333 ORTHO05D001208 1.0e-11 72.4 44 77.3
QL10p058711 Quercus lobata HOM05D001333 ORTHO05D001208 1.0e-11 72.4 44 75.0
QL10p059101 Quercus lobata HOM05D001333 ORTHO05D001208 1.0e-11 72.4 44 75.0
CiPaw.01G199200 Carya illinoinensis HOM05D001333 ORTHO05D001208 1.3e-11 72.0 44 75.0
MD02G1003500 Malus domestica HOM05D001333 ORTHO05D001208 1.7e-11 71.6 44 77.3
Ciclev10020409m.g Citrus clementina HOM05D001333 ORTHO05D001208 2.3e-11 71.2 44 75.0
Dinv18303 Davidia involucrata HOM05D001333 ORTHO05D001208 3.0e-11 70.9 44 75.0
FAN26G3259 Fragaria x ananassa HOM05D001333 ORTHO05D001208 3.0e-11 70.9 44 75.0
Manes.05G137682 Manihot esculenta HOM05D001333 ORTHO05D001208 3.0e-11 70.9 44 77.3
Sabra17G0009100 Salix brachista HOM05D001333 ORTHO05D001208 3.0e-11 70.9 44 75.0
CiPaw.02G123600 Carya illinoinensis HOM05D001333 ORTHO05D001208 3.9e-11 70.5 42 78.6
Potri.017G009700 Populus trichocarpa HOM05D001333 ORTHO05D001208 3.9e-11 70.5 44 75.0
MSTRG.22045 Avicennia marina HOM05D001333 ORTHO05D001208 5.1e-11 70.1 44 72.7
CSS0016113 Camellia sinensis var. sinensis HOM05D002568 ORTHO05D002814 6.6e-11 69.7 44 75.0
CSS0048773 Camellia sinensis var. sinensis HOM05D001333 ORTHO05D001208 6.6e-11 69.7 44 75.0
FAN28G1807 Fragaria x ananassa HOM05D001333 ORTHO05D001208 6.6e-11 69.7 44 75.0
GSVIVG01038198001 Vitis vinifera HOM05D001333 ORTHO05D001208 6.6e-11 69.7 42 78.6
FvH4_1g00430 Fragaria vesca HOM05D001333 ORTHO05D001208 8.6e-11 69.3 44 72.7
MD15G1146800 Malus domestica HOM05D001333 ORTHO05D001208 1.1e-10 68.9 44 75.0
Lj6A270T15 Lonicera japonica HOM05D001333 ORTHO05D001208 1.9e-10 68.2 43 72.1
Cc03_g15070 Coffea canephora HOM05D001333 ORTHO05D001208 2.5e-10 67.8 44 68.2
Thecc.04G160300 Theobroma cacao HOM05D001333 ORTHO05D001208 3.3e-10 67.4 44 68.2
AUR62002432 Chenopodium quinoa HOM05D001333 ORTHO05D001208 4.3e-10 67.0 44 72.7
AUR62023756 Chenopodium quinoa HOM05D001333 ORTHO05D001208 4.3e-10 67.0 44 72.7
RcHm_v2.0_Chr2g0084941 Rosa chinensis HOM05D001333 ORTHO05D001208 5.6e-10 66.6 44 68.2
Solyc08g014440.4 Solanum lycopersicum HOM05D001333 ORTHO05D001208 7.3e-10 66.2 44 70.5
Sopen08g005430 Solanum pennellii HOM05D001333 ORTHO05D001208 7.3e-10 66.2 44 70.5
MBI07_g39639_MAGBIO Magnolia biondii HOM05D001333 ORTHO05D001208 9.5e-10 65.9 44 70.5
Sabra16G0283600 Salix brachista HOM05D001333 ORTHO05D001208 9.5e-10 65.9 44 70.5
CANSAT56G1870 Cannabis sativa HOM05D001333 ORTHO05D001208 1.2e-09 65.5 43 69.8
Peaxi162Scf00483g00315 Petunia axillaris HOM05D001333 ORTHO05D001208 2.1e-09 64.7 44 68.2
PGSC0003DMG400025221 Solanum tuberosum HOM05D001333 ORTHO05D001208 2.1e-09 64.7 44 70.5
Migut.N03051 Erythranthe guttata HOM05D001333 ORTHO05D001208 2.8e-09 64.3 44 70.5
Eucgr.H01861 Eucalyptus grandis HOM05D001333 ORTHO05D001208 2.8e-09 64.3 43 67.4
PGSC0003DMG400005366 Solanum tuberosum HOM05D001333 ORTHO05D001208 2.8e-09 64.3 44 68.2
Gohir.A05G328100 Gossypium hirsutum HOM05D001333 ORTHO05D001208 3.6e-09 63.9 44 70.5
Gohir.D05G328100 Gossypium hirsutum HOM05D001333 ORTHO05D001208 3.6e-09 63.9 44 70.5
Gorai.009G352000 Gossypium raimondii HOM05D001333 ORTHO05D001208 3.6e-09 63.9 44 70.5
Hma1.2p1_0765F.1_g215110 Hydrangea macrophylla HOM05D001333 ORTHO05D001208 3.6e-09 63.9 44 72.7
TWI38G1815 Tripterygium wilfordii HOM05D001333 ORTHO05D001208 3.6e-09 63.9 44 70.5
CAN.G176.9 Capsicum annuum HOM05D001333 ORTHO05D001208 4.7e-09 63.5 44 68.2
Oeu022453.1 Olea europaea HOM05D001333 ORTHO05D001208 4.7e-09 63.5 44 61.4
Os01g0893400 Oryza sativa ssp. japonica HOM05D001333 ORTHO05D001208 4.7e-09 63.5 40 72.5
Duzib268G1441 Durio zibethinus HOM05D001333 ORTHO05D001208 8.1e-09 62.8 44 70.5
MSTRG.24560 Avicennia marina HOM05D001333 ORTHO05D001208 1.1e-08 62.4 44 65.9
Rhsim02G0087000 Rhododendron simsii HOM05D001333 ORTHO05D001208 1.1e-08 62.4 44 63.6
Sabra01G0117600 Salix brachista HOM05D001333 ORTHO05D001208 1.1e-08 62.4 44 68.2
EL10Ac3g06125 Beta vulgaris HOM05D001333 ORTHO05D001208 1.4e-08 62.0 44 68.2
Rhsim02G0086300 Rhododendron simsii HOM05D001333 ORTHO05D001208 1.4e-08 62.0 44 63.6
Duzib151G0765 Durio zibethinus HOM05D001333 ORTHO05D001208 1.8e-08 61.6 44 65.9
Peaxi162Scf00075g00124 Petunia axillaris HOM05D001333 ORTHO05D001208 1.8e-08 61.6 44 68.2
THA.LOC104800926 Tarenaya hassleriana HOM05D001333 ORTHO05D001208 1.8e-08 61.6 43 67.4
PSO675G1355 Papaver somniferum HOM05D001333 ORTHO05D001208 2.4e-08 61.2 42 71.4
PGR042G3665 Punica granatum HOM05D001333 ORTHO05D001208 3.1e-08 60.8 44 65.9
AL1G15600 Arabidopsis lyrata HOM05D001333 ORTHO05D001208 5.2e-08 60.1 43 65.1
Thhalv10007799m.g Eutrema salsugineum HOM05D001333 ORTHO05D001208 5.2e-08 60.1 43 65.1
Potri.007G140400 Populus trichocarpa HOM05D001333 ORTHO05D001208 6.8e-08 59.7 43 67.4
DCAR_023778 Daucus carota HOM05D001333 ORTHO05D001208 1.2e-07 58.9 43 67.4
Gohir.D02G007100 Gossypium hirsutum HOM05D001333 ORTHO05D001208 1.5e-07 58.5 44 59.1
Gorai.005G008300 Gossypium raimondii HOM05D001333 ORTHO05D001208 1.5e-07 58.5 44 59.1
AT1G05690 Arabidopsis thaliana HOM05D001333 ORTHO05D001208 2.0e-07 58.2 43 65.1
HPP92_011714 Vanilla planifolia HOM05D001333 ORTHO05D001208 2.0e-07 58.2 43 67.4
Carub.0001s0504 Capsella rubella HOM05D001333 ORTHO05D001208 2.6e-07 57.8 43 65.1
Nn5g30561 Nelumbo nucifera HOM05D001333 ORTHO05D001208 2.6e-07 57.8 44 63.6
unitig_8.g3638 Utricularia gibba HOM05D001333 ORTHO05D001208 3.4e-07 57.4 43 65.1
BolC5t29184H Brassica oleracea HOM05D000106 ORTHO05D000160 5.8e-07 56.6 43 60.5
Zm00001eb145030 Zea mays HOM05D001333 ORTHO05D001208 7.6e-07 56.2 40 62.5
BcaB02g06829 Brassica carinata HOM05D000106 ORTHO05D000160 9.9e-07 55.8 43 58.1
SGA_v2.0_scaffold25G11007 Striga asiatica HOM05D002514 ORTHO05D002761 9.9e-07 55.8 44 65.9
Gohir.A02G007300 Gossypium hirsutum HOM05D001333 ORTHO05D001208 1.3e-06 55.5 44 56.8
Aa31LG1G18970 Aethionema arabicum HOM05D001333 ORTHO05D001208 1.7e-06 55.1 43 62.8
A10p04450 Brassica napus HOM05D000106 ORTHO05D000160 1.7e-06 55.1 43 58.1
BraA10t42712Z Brassica rapa HOM05D001333 ORTHO05D001208 1.7e-06 55.1 43 58.1
vmacro15703 Vaccinium macrocarpon HOM05D001333 ORTHO05D001208 1.7e-06 55.1 44 56.8
BcaC05g24345 Brassica carinata HOM05D001333 ORTHO05D001208 2.2e-06 54.7 43 58.1
C05p04060 Brassica napus HOM05D000106 ORTHO05D000160 2.2e-06 54.7 43 58.1
Lalb_Chr16g0378821 Lupinus albus HOM05D001333 ORTHO05D001208 2.9e-06 54.3 44 63.6
Hund16393 Selenicereus undatus HOM05D001333 ORTHO05D001208 3.8e-06 53.9 44 59.1
CANSAT01G1156 Cannabis sativa HOM05D001333 ORTHO05D001208 4.9e-06 53.5 44 63.6
Nn7g37488 Nelumbo nucifera HOM05D001333 ORTHO05D001208 4.9e-06 53.5 26 96.2
CSS0028559 Camellia sinensis var. sinensis HOM05D001333 ORTHO05D001208 6.4e-06 53.1 44 61.4
CSS0040162 Camellia sinensis var. sinensis HOM05D001333 ORTHO05D001208 6.4e-06 53.1 44 61.4
Lalb_Chr09g0323561 Lupinus albus HOM05D001333 ORTHO05D001208 8.4e-06 52.8 44 61.4
Sp1g04510 Schrenkiella parvula HOM05D001333 ORTHO05D001208 8.4e-06 52.8 43 62.8
Solyc12g019420.3 Solanum lycopersicum HOM05D001333 ORTHO05D001208 8.4e-06 52.8 44 54.5


User provided reference genes

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