Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 0.0e+00 1407.5 731 100.0
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 7.9e-207 724.5 738 55.3
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 4.7e-159 565.8 748 47.3
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 1.0e-150 538.1 745 45.4
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 8.8e-142 508.4 753 42.9
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 1.0e-137 495.0 753 44.0
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 2.3e-137 493.8 739 43.3
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 6.8e-134 482.3 735 42.4
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 5.7e-133 479.2 734 41.7
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 2.9e-132 476.9 829 39.1
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 8.6e-129 465.3 741 41.7
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 4.3e-128 463.0 939 37.2
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 8.0e-127 458.8 733 40.9
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 8.0e-127 458.8 749 41.8
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 5.8e-125 452.6 797 40.7
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 3.7e-124 449.9 736 41.2
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 4.9e-124 449.5 730 40.3
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 1.2e-122 444.9 802 40.4
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 1.7e-121 441.0 810 40.1
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 1.5e-120 438.0 742 40.2
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 3.3e-120 436.8 750 38.1
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 9.5e-120 435.3 739 39.4
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 1.6e-119 434.5 731 39.5
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 6.2e-119 432.6 739 38.0
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 1.4e-118 431.4 672 42.6
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 2.3e-118 430.6 736 39.4
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 4.0e-118 429.9 740 37.8
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.0e-117 427.6 740 37.7
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 2.6e-117 427.2 773 37.8
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 1.6e-114 417.9 714 40.1
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 1.6e-114 417.9 732 40.2
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 7.8e-114 415.6 904 35.4
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.7e-113 414.5 736 38.6
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 1.9e-112 411.0 802 37.9
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 4.3e-112 409.8 740 37.7
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 7.3e-112 409.1 738 36.4
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.2e-111 408.3 693 39.4
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 2.8e-111 407.1 735 39.7
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 8.1e-111 405.6 735 38.5
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 1.2e-109 401.7 768 37.6
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 1.2e-109 401.7 768 37.6
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 1.7e-105 387.9 742 37.7
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 2.3e-105 387.5 624 41.0
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 3.9e-105 386.7 733 37.1
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 3.6e-103 380.2 769 37.6
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 4.7e-103 379.8 593 42.8
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 6.2e-103 379.4 752 36.0
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 8.1e-103 379.0 741 37.7
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 2.4e-102 377.5 741 38.6
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 3.1e-102 377.1 695 38.8
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 5.2e-102 376.3 741 38.6
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 3.4e-101 373.6 733 39.8
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 4.4e-101 373.2 725 38.2
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 3.8e-100 370.2 752 35.9
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 1.4e-99 368.2 669 38.3
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 5.4e-99 366.3 743 35.7
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 1.0e-97 362.1 770 35.1
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 5.1e-97 359.8 671 37.9
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 7.3e-96 355.9 682 37.5
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 9.6e-96 355.5 743 33.5
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 3.6e-95 353.6 746 33.6
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 1.1e-94 352.1 679 38.9
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 1.1e-94 352.1 679 38.9
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 1.1e-94 352.1 679 38.9
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 1.8e-94 351.3 728 37.6
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 9.9e-93 345.5 692 36.8
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 9.9e-93 345.5 799 33.7
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 2.4e-91 340.9 804 34.6
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 5.4e-91 339.7 336 57.1
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 7.1e-91 339.3 739 34.5
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 7.1e-91 339.3 756 35.6
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 3.0e-89 334.0 861 33.2
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 1.9e-88 331.3 691 36.6
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 4.8e-87 326.6 608 37.3
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 5.8e-85 319.7 746 34.3
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 7.6e-85 319.3 740 33.1
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 3.8e-84 317.0 766 33.3
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 2.4e-83 314.3 664 35.5
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 3.0e-81 307.4 524 38.5
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 5.1e-81 306.6 740 33.8
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 2.1e-79 301.2 731 31.6
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 2.5e-75 287.7 672 33.2
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 5.5e-75 286.6 765 31.4
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 7.9e-74 282.7 670 34.0
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 9.7e-72 275.8 315 50.2
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 2.1e-66 258.1 684 31.7
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 3.4e-61 240.7 281 48.4
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.5e-59 234.6 435 39.1
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 1.1e-56 225.7 419 37.7
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 5.7e-56 223.4 276 44.2
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 2.0e-53 214.9 522 33.7
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 2.7e-50 204.5 825 26.4
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 6.3e-47 193.4 229 47.2
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 1.8e-38 165.2 277 39.4
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 6.5e-36 156.8 384 35.2
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 1.1e-35 156.0 158 54.4
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 9.8e-32 142.9 161 51.6
TAR629G2830 Trochodendron aralioides HOM05D006140 ORTHO05D007834 3.7e-31 141.0 202 48.5
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 1.0e-28 132.9 337 33.2
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 1.3e-28 132.5 155 48.4
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.7e-28 132.1 136 55.9
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 5.0e-28 130.6 324 33.3
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 8.6e-28 129.8 194 40.2
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 7.2e-27 126.7 148 52.0
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 3.4e-24 117.9 363 27.8
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 1.3e-23 115.9 186 40.3
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 2.8e-23 114.8 576 26.0
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 1.7e-20 105.5 171 43.3
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.3e-20 105.1 178 44.4
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 2.6e-16 91.7 255 27.5
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.3e-15 89.4 90 48.9
SEGI_32981 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.3e-12 79.3 399 24.3
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 1.1e-11 76.3 497 22.3
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 5.6e-11 73.9 136 34.6
AagrBONN_evm.TU.Sc2ySwM_344.4141 Anthoceros agrestis HOM05D006140 ORTHO05D007834 3.4e-08 64.7 216 26.4
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 3.4e-08 64.7 629 21.3
GSVIVG01012998001 Vitis vinifera HOM05D006140 ORTHO05D007834 3.4e-08 64.7 63 54.0
Os02g0128300 Oryza sativa ssp. japonica HOM05D006140 ORTHO05D007834 8.3e-07 60.1 131 27.5
unitig_32.g10972 Utricularia gibba HOM05D006140 ORTHO05D007834 1.1e-06 59.7 170 34.1
Duzib084G0453 Durio zibethinus HOM05D006140 ORTHO05D007834 3.2e-06 58.2 110 38.2


User provided reference genes

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