Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01816 Nelumbo nucifera HOM05D007041 ORTHO05D008036 6.3e-62 240.7 134 100.0
Nn2g15118 Nelumbo nucifera HOM05D007041 ORTHO05D008036 4.9e-38 161.4 124 81.5
TAR629G2489 Trochodendron aralioides HOM05D007041 ORTHO05D008036 1.1e-18 97.1 120 48.3
TAR636G2915 Trochodendron aralioides HOM05D007041 ORTHO05D008036 4.7e-17 91.7 127 44.1
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 6.4e-14 81.3 99 46.5
Gohir.D08G147100 Gossypium hirsutum HOM05D007041 ORTHO05D008036 5.4e-13 78.2 105 45.7
Gorai.004G152600 Gossypium raimondii HOM05D007041 ORTHO05D008036 5.4e-13 78.2 105 45.7
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 1.3e-11 73.6 103 45.6
RcHm_v2.0_Chr1g0358991 Rosa chinensis HOM05D007041 ORTHO05D008036 8.6e-11 70.9 100 44.0
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 1.1e-10 70.5 131 37.4
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 1.9e-10 69.7 84 52.4
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 5.6e-10 68.2 88 40.9
Thecc.01G346300 Theobroma cacao HOM05D007041 ORTHO05D008036 5.6e-10 68.2 99 39.4
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 7.3e-10 67.8 94 42.6
Nn3g19073 Nelumbo nucifera HOM05D007041 ORTHO05D008036 7.3e-10 67.8 93 51.6
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.6e-09 66.6 106 41.5
CSS0049473 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 2.1e-09 66.2 94 41.5
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.1e-09 66.2 105 41.9
HPP92_007621 Vanilla planifolia HOM05D007041 ORTHO05D008036 2.1e-09 66.2 44 65.9
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 3.6e-09 65.5 105 41.0
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 3.6e-09 65.5 44 65.9
Oeu009948.1 Olea europaea HOM05D007041 ORTHO05D008036 3.6e-09 65.5 46 58.7
EL10Ac1g00306 Beta vulgaris HOM05D007041 ORTHO05D008036 4.7e-09 65.1 35 77.1
CiPaw.02G039100 Carya illinoinensis HOM05D007041 ORTHO05D008036 8.1e-09 64.3 90 44.4
Atru.chr5.628 Acer truncatum HOM05D007041 ORTHO05D008036 1.1e-08 63.9 86 43.0
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 1.1e-08 63.9 72 44.4
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.1e-08 63.9 63 50.8
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.1e-08 63.9 105 41.0
Manes.05G025400 Manihot esculenta HOM05D007041 ORTHO05D008036 1.1e-08 63.9 100 37.0
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.4e-08 62.8 105 40.0
CANSAT56G1227 Cannabis sativa HOM05D007041 ORTHO05D008036 4.0e-08 62.0 31 83.9
Lalb_Chr17g0342361 Lupinus albus HOM05D007041 ORTHO05D008036 4.0e-08 62.0 114 34.2
Sc01g0010130 Simmondsia chinensis HOM05D007041 ORTHO05D008036 4.0e-08 62.0 95 37.9
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 4.0e-08 62.0 99 40.4
Glyma.07G057800 Glycine max HOM05D007041 ORTHO05D008036 5.2e-08 61.6 50 52.0
Manes.02G012350 Manihot esculenta HOM05D007041 ORTHO05D008036 5.2e-08 61.6 136 34.6
Nitab4.5_0000305g0050 Nicotiana tabacum HOM05D007041 ORTHO05D008036 6.8e-08 61.2 47 59.6
Oeu007854.1 Olea europaea HOM05D007041 ORTHO05D008036 6.8e-08 61.2 45 55.6
Thecc.03G293400 Theobroma cacao HOM05D007041 ORTHO05D008036 6.8e-08 61.2 47 53.2
C08p36510 Brassica napus HOM05D007041 ORTHO05D008036 8.9e-08 60.8 54 55.6
BolC8t51234H Brassica oleracea HOM05D007041 ORTHO05D008036 8.9e-08 60.8 54 55.6
Peaxi162Scf00843g00001 Petunia axillaris HOM05D007041 ORTHO05D008036 8.9e-08 60.8 45 57.8
Zm00001eb310140 Zea mays HOM05D007041 ORTHO05D008036 1.2e-07 60.5 38 68.4
Zm00001eb441140 Zea mays HOM05D007041 ORTHO05D008036 1.2e-07 60.5 38 68.4
vmacro22516 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 1.5e-07 60.1 109 33.9
Gohir.A07G139300 Gossypium hirsutum HOM05D007041 ORTHO05D008036 2.0e-07 59.7 98 40.8
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 2.0e-07 59.7 132 33.3
vmacro22517 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 2.0e-07 59.7 44 56.8
Lj1g0010364 Lotus japonicus HOM05D007041 ORTHO05D008036 2.6e-07 59.3 96 38.5
Phvul.010G111500 Phaseolus vulgaris HOM05D007041 ORTHO05D008036 2.6e-07 59.3 35 68.6
Prupe.5G115500 Prunus persica HOM05D007041 ORTHO05D008036 2.6e-07 59.3 32 71.9
Sed0010994 Sechium edule HOM05D007041 ORTHO05D008036 2.6e-07 59.3 34 70.6
A09p53730 Brassica napus HOM05D007041 ORTHO05D008036 3.4e-07 58.9 29 79.3
Carub.0005s2835 Capsella rubella HOM05D007041 ORTHO05D008036 3.4e-07 58.9 35 68.6
Thhalv10006386m.g Eutrema salsugineum HOM05D007041 ORTHO05D008036 3.4e-07 58.9 101 40.6
Lj3g0003817 Lotus japonicus HOM05D007041 ORTHO05D008036 3.4e-07 58.9 133 36.1
AL5G44060 Arabidopsis lyrata HOM05D007041 ORTHO05D008036 4.4e-07 58.5 29 79.3
AT3G61660 Arabidopsis thaliana HOM05D007041 ORTHO05D008036 4.4e-07 58.5 42 59.5
Nitab4.5_0000223g0230 Nicotiana tabacum HOM05D007041 ORTHO05D008036 4.4e-07 58.5 42 61.9
BraA09t40795Z Brassica rapa HOM05D007041 ORTHO05D008036 5.8e-07 58.2 53 52.8
CARHR171970 Cardamine hirsuta HOM05D007041 ORTHO05D008036 5.8e-07 58.2 93 45.2
Gohir.D07G144400 Gossypium hirsutum HOM05D007041 ORTHO05D008036 5.8e-07 58.2 98 37.8
Manes.02G012400 Manihot esculenta HOM05D007041 ORTHO05D008036 5.8e-07 58.2 101 39.6
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 5.8e-07 58.2 92 38.0
Sabra14G0070100 Salix brachista HOM05D007041 ORTHO05D008036 5.8e-07 58.2 35 71.4
Sp5g01745 Schrenkiella parvula HOM05D007041 ORTHO05D008036 5.8e-07 58.2 68 45.6
AUR62023489 Chenopodium quinoa HOM05D007041 ORTHO05D008036 7.6e-07 57.8 33 75.8
Rhsim01G0170500 Rhododendron simsii HOM05D007041 ORTHO05D008036 7.6e-07 57.8 42 61.9
VMungo0331G1585 Vigna mungo HOM05D007041 ORTHO05D008036 7.6e-07 57.8 33 72.7
arahy.Tifrunner.gnm1.ann1.JU2T19 Arachis hypogaea HOM05D007041 ORTHO05D008036 9.9e-07 57.4 29 72.4
CiPaw.12G084900 Carya illinoinensis HOM05D007041 ORTHO05D008036 9.9e-07 57.4 122 33.6
Potri.002G168300 Populus trichocarpa HOM05D007041 ORTHO05D008036 9.9e-07 57.4 105 39.0
Sopen08g030330 Solanum pennellii HOM05D002045 ORTHO05D002014 9.9e-07 57.4 29 82.8
PGSC0003DMG400012302 Solanum tuberosum HOM05D007041 ORTHO05D008036 9.9e-07 57.4 29 82.8
Gohir.A12G234950 Gossypium hirsutum HOM05D007041 ORTHO05D008036 1.3e-06 57.0 32 65.6
Gohir.D12G236050 Gossypium hirsutum HOM05D007041 ORTHO05D008036 1.3e-06 57.0 32 65.6
Gorai.008G252800 Gossypium raimondii HOM05D007041 ORTHO05D008036 1.3e-06 57.0 32 65.6
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 1.7e-06 56.6 102 43.1
Glyma.16G026800 Glycine max HOM05D007041 ORTHO05D008036 1.7e-06 56.6 94 39.4
Gorai.001G156400 Gossypium raimondii HOM05D007041 ORTHO05D008036 1.7e-06 56.6 98 36.7
Manes.01G248300 Manihot esculenta HOM05D007041 ORTHO05D008036 1.7e-06 56.6 92 41.3
Potri.001G094000 Populus trichocarpa HOM05D007041 ORTHO05D008036 1.7e-06 56.6 88 34.1
MELO3C006045.2 Cucumis melo HOM05D007041 ORTHO05D008036 2.2e-06 56.2 34 64.7
Ca_09497_v3 Cicer arietinum L. HOM05D007041 ORTHO05D008036 2.9e-06 55.8 43 58.1
Nitab4.5_0004161g0040 Nicotiana tabacum HOM05D007041 ORTHO05D008036 2.9e-06 55.8 82 42.7
Potri.014G095600 Populus trichocarpa HOM05D007041 ORTHO05D008036 2.9e-06 55.8 98 41.8
RcHm_v2.0_Chr7g0195411 Rosa chinensis HOM05D017100 ORTHO05D008036 2.9e-06 55.8 43 58.1
HPP92_005512 Vanilla planifolia HOM05D007041 ORTHO05D008036 2.9e-06 55.8 45 55.6
SGA_v2.0_scaffold11G05722 Striga asiatica HOM05D007041 ORTHO05D008036 3.8e-06 55.5 62 43.5
Cpa.g.sc2382.1 Carica papaya HOM05D007041 ORTHO05D008036 4.9e-06 55.1 73 46.6
Oeu007855.1 Olea europaea HOM05D007041 ORTHO05D008036 4.9e-06 55.1 101 31.7
Haze_08658 Corylus avellana HOM05D007041 ORTHO05D008036 6.4e-06 54.7 82 39.0
Potri.003G137600 Populus trichocarpa HOM05D007041 ORTHO05D008036 6.4e-06 54.7 94 31.9
arahy.Tifrunner.gnm1.ann1.LKBY4F Arachis hypogaea HOM05D007041 ORTHO05D008036 8.4e-06 54.3 84 36.9
Rhsim07G0083800 Rhododendron simsii HOM05D007041 ORTHO05D008036 8.4e-06 54.3 40 62.5


User provided reference genes

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