Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01708 Nelumbo nucifera HOM05D000100 ORTHO05D272884 4.9e-34 147.1 69 100.0
Nn1g01709 Nelumbo nucifera HOM05D000100 ORTHO05D000052 1.2e-11 72.8 45 80.0
SalBow4G1158 Salvia bowleyana HOM05D000100 ORTHO05D000052 3.9e-07 57.8 41 68.3
ATR0721G066 Amborella trichopoda HOM05D000100 ORTHO05D000052 6.7e-07 57.0 33 75.8
TWI39G0849 Tripterygium wilfordii HOM05D000100 ORTHO05D000052 6.7e-07 57.0 29 79.3
CSS0011112 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 8.7e-07 56.6 29 79.3
CSS0048859 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 8.7e-07 56.6 29 79.3
Cc02_g02190 Coffea canephora HOM05D000100 ORTHO05D000052 1.1e-06 56.2 33 72.7
DCAR_020283 Daucus carota HOM05D000100 ORTHO05D000052 1.1e-06 56.2 29 86.2
Lsat_1_v5_gn_4_156121 Lactuca sativa HOM05D000100 ORTHO05D000052 1.1e-06 56.2 48 56.2
Lj1C1008T2 Lonicera japonica HOM05D000100 ORTHO05D000052 1.1e-06 56.2 29 79.3
Oeu049085.1 Olea europaea HOM05D000100 ORTHO05D000052 1.1e-06 56.2 29 79.3
vmacro06610 Vaccinium macrocarpon HOM05D000100 ORTHO05D000052 1.1e-06 56.2 40 62.5
DCAR_020282 Daucus carota HOM05D000100 ORTHO05D000052 1.5e-06 55.8 37 70.3
Rhsim03G0192700 Rhododendron simsii HOM05D000100 ORTHO05D000052 1.5e-06 55.8 40 62.5
vmacro06608 Vaccinium macrocarpon HOM05D000100 ORTHO05D000052 1.5e-06 55.8 39 59.0
vmacro06611 Vaccinium macrocarpon HOM05D000100 ORTHO05D000052 1.5e-06 55.8 40 62.5
Actinidia08593 Actinidia chinensis HOM05D000100 ORTHO05D000052 1.9e-06 55.5 54 51.9
Actinidia34167 Actinidia chinensis HOM05D000100 ORTHO05D000052 1.9e-06 55.5 29 72.4
Dinv28371 Davidia involucrata HOM05D000100 ORTHO05D000052 1.9e-06 55.5 28 85.7
Dinv28372 Davidia involucrata HOM05D000100 ORTHO05D000052 1.9e-06 55.5 28 85.7
Lsat_1_v5_gn_9_56880 Lactuca sativa HOM05D000100 ORTHO05D000052 1.9e-06 55.5 29 75.9
Oeu049093.1 Olea europaea HOM05D000100 ORTHO05D000052 1.9e-06 55.5 28 78.6
SalBow4G0086 Salvia bowleyana HOM05D000100 ORTHO05D000052 2.5e-06 55.1 29 79.3
unitig_747.g21419 Utricularia gibba HOM05D000100 ORTHO05D000052 2.5e-06 55.1 30 76.7
PSO384G3386 Papaver somniferum HOM05D000100 ORTHO05D000052 3.3e-06 54.7 29 79.3
GSVIVG01028812001 Vitis vinifera HOM05D000100 ORTHO05D000052 3.3e-06 54.7 29 79.3
Aqoxy5G03871 Aquilegia oxysepala HOM05D000100 ORTHO05D000052 4.3e-06 54.3 32 71.9
Migut.F00274 Erythranthe guttata HOM05D000100 ORTHO05D000052 4.3e-06 54.3 29 75.9
HanXRQChr14g0448921 Helianthus annuus HOM05D000100 ORTHO05D000052 4.3e-06 54.3 29 75.9
Lsat_1_v5_gn_2_134080 Lactuca sativa HOM05D000100 ORTHO05D000052 4.3e-06 54.3 46 54.3
MD01G1210600 Malus domestica HOM05D000100 ORTHO05D000052 4.3e-06 54.3 32 71.9
GSVIVG01028807001 Vitis vinifera HOM05D000100 ORTHO05D000052 4.3e-06 54.3 29 75.9
Cfa002554 Carpinus fangiana HOM05D000100 ORTHO05D000052 5.6e-06 53.9 29 75.9
COL.COLO4_30279 Corchorus olitorius HOM05D000100 ORTHO05D000052 5.6e-06 53.9 29 75.9
Haze_00071 Corylus avellana HOM05D000100 ORTHO05D000052 5.6e-06 53.9 29 75.9
Duzib205G2018 Durio zibethinus HOM05D000100 ORTHO05D000052 5.6e-06 53.9 29 75.9
Lsat_1_v5_gn_2_133400 Lactuca sativa HOM05D000100 ORTHO05D000052 5.6e-06 53.9 46 54.3
Dinv35273 Davidia involucrata HOM05D000100 ORTHO05D000052 9.6e-06 53.1 34 67.6
Dinv35277 Davidia involucrata HOM05D000100 ORTHO05D000052 9.6e-06 53.1 34 67.6
Lj1C1008T1 Lonicera japonica HOM05D000100 ORTHO05D000052 9.6e-06 53.1 29 75.9


User provided reference genes

Program Settings