Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 0.0e+00 1093.6 531 100.0
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 2.2e-230 802.4 490 77.6
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 6.7e-224 780.8 461 79.6
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 6.7e-224 780.8 494 74.5
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 1.5e-223 779.6 483 74.7
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 1.5e-223 779.6 481 77.3
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 2.0e-223 779.2 470 78.3
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 2.5e-223 778.9 505 75.8
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 3.3e-223 778.5 496 75.0
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 3.7e-222 775.0 483 76.4
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 3.7e-222 775.0 455 78.5
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 6.3e-222 774.2 468 78.0
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 8.2e-222 773.9 467 78.4
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 1.8e-221 772.7 474 77.2
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 1.8e-221 772.7 462 78.4
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 6.9e-221 770.8 461 78.5
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 1.5e-220 769.6 494 75.3
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 4.5e-220 768.1 456 80.5
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 2.9e-219 765.4 469 77.2
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 3.8e-219 765.0 460 76.7
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 6.5e-219 764.2 459 78.4
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 3.2e-218 761.9 514 71.6
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 5.5e-218 761.1 462 77.3
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 1.6e-217 759.6 461 76.6
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 1.6e-217 759.6 491 73.9
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 1.6e-217 759.6 489 74.0
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 2.1e-217 759.2 458 77.7
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 3.6e-217 758.4 484 75.2
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.6e-217 758.4 468 76.1
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 1.0e-216 756.9 468 76.3
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.4e-216 756.5 467 75.8
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 1.8e-216 756.1 459 77.3
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 3.9e-216 755.0 494 74.5
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 5.1e-216 754.6 455 78.0
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 2.0e-215 752.7 468 75.6
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 4.4e-215 751.5 505 72.3
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 4.4e-215 751.5 517 71.0
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 4.4e-215 751.5 467 75.4
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 7.4e-215 750.7 470 74.7
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 7.4e-215 750.7 520 69.8
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 1.3e-214 750.0 458 76.6
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 2.8e-214 748.8 491 72.3
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 2.8e-214 748.8 484 73.1
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 3.7e-214 748.4 491 72.3
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 4.8e-214 748.0 460 76.1
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 6.3e-214 747.7 458 76.6
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 1.1e-213 746.9 491 72.3
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 1.1e-213 746.9 489 72.2
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 1.1e-213 746.9 462 75.3
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 1.1e-213 746.9 478 74.7
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 2.4e-213 745.7 471 74.1
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 4.1e-213 745.0 457 76.1
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 5.9e-212 741.1 462 77.3
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 7.7e-212 740.7 458 74.9
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 1.7e-211 739.6 472 74.2
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 2.9e-211 738.8 488 72.7
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.8e-211 738.4 497 71.4
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 5.0e-211 738.0 482 74.7
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 5.0e-211 738.0 460 75.2
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 6.5e-211 737.6 458 74.7
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 8.5e-211 737.3 499 71.1
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 1.1e-210 736.9 455 74.5
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 1.5e-210 736.5 460 75.2
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 1.5e-210 736.5 526 67.7
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 2.5e-210 735.7 454 76.2
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 2.1e-209 732.6 475 74.9
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 3.0e-208 728.8 458 74.9
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 1.1e-207 726.9 457 74.4
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 1.5e-207 726.5 470 73.4
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 1.5e-207 726.5 461 74.4
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 2.0e-207 726.1 454 75.6
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 2.6e-207 725.7 461 73.8
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 4.4e-207 724.9 444 76.1
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 5.7e-207 724.5 470 73.2
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 5.7e-207 724.5 453 73.7
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 9.7e-207 723.8 461 73.1
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 1.3e-206 723.4 495 70.7
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 2.2e-206 722.6 463 74.5
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 2.2e-206 722.6 454 75.3
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 3.7e-206 721.8 526 66.9
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 4.8e-206 721.5 500 70.0
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.1e-205 720.3 462 74.5
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.8e-205 719.5 472 71.0
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 5.3e-205 718.0 477 70.6
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 9.1e-205 717.2 472 72.0
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 1.2e-204 716.8 472 72.0
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.0e-203 713.8 482 71.6
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 5.2e-200 701.4 463 71.3
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 5.2e-200 701.4 454 70.9
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 4.5e-196 688.3 481 68.4
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 2.2e-190 669.5 465 69.5
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 1.1e-186 657.1 419 73.7
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 1.5e-178 630.2 446 66.6
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 1.2e-175 620.5 483 61.5
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 1.2e-175 620.5 449 63.0
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 2.0e-175 619.8 468 65.4
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 1.6e-172 610.1 476 63.0
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 2.0e-172 609.8 455 65.9
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.0e-171 607.4 495 61.2
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.1e-164 583.2 364 73.6
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 7.8e-164 581.3 475 61.9
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.9e-162 576.6 368 73.6
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 4.7e-161 572.0 371 73.6
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 8.1e-153 544.7 366 73.5
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 3.7e-129 466.1 453 50.8
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 6.9e-128 461.8 476 54.0
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 6.0e-124 448.7 273 78.4
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 3.2e-117 426.4 472 47.9
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 2.8e-113 413.3 276 69.9
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 2.4e-104 383.6 463 46.0
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 4.0e-83 313.2 452 40.3
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 7.1e-40 169.5 100 75.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 1.1e-37 162.2 228 39.5
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 8.1e-36 156.0 98 74.5
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 8.1e-36 156.0 98 74.5
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 8.1e-36 156.0 98 74.5
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 8.1e-36 156.0 98 74.5
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 3.1e-27 127.5 282 32.6
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 3.2e-24 117.5 78 69.2
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 1.7e-17 95.1 63 71.4
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 2.0e-10 71.6 69 50.7
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 3.8e-09 67.4 43 76.7
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 4.2e-08 63.9 38 76.3
BcaC08g45232 Brassica carinata HOM05D000289 ORTHO05D000208 5.5e-08 63.5 46 54.3
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.0e-06 59.3 41 75.6
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 6.7e-06 56.6 119 32.8


User provided reference genes

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