Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01446 Nelumbo nucifera HOM05D002111 ORTHO05D002160 6.6e-78 293.9 141 100.0
TAR381G0049 Trochodendron aralioides HOM05D002111 ORTHO05D002160 4.4e-13 78.6 105 47.6
FAN28G1556 Fragaria x ananassa HOM05D002111 ORTHO05D002160 1.7e-12 76.6 88 48.9
TAR625G1521 Trochodendron aralioides HOM05D002111 ORTHO05D002160 2.2e-12 76.3 73 56.2
FAN23G1977 Fragaria x ananassa HOM05D002111 ORTHO05D002160 6.3e-12 74.7 98 45.9
FAN26G0864 Fragaria x ananassa HOM05D002111 ORTHO05D002160 6.3e-12 74.7 89 47.2
FvH4_1g20920 Fragaria vesca HOM05D002111 ORTHO05D002160 1.8e-11 73.2 89 47.2
FAN19G2413 Fragaria x ananassa HOM05D002111 ORTHO05D002160 4.1e-11 72.0 89 46.1
Duzib147G0507 Durio zibethinus HOM05D002111 ORTHO05D002160 2.6e-10 69.3 97 42.3
Atru.chr4.66 Acer truncatum HOM05D002111 ORTHO05D002160 1.0e-09 67.4 97 38.1
MBI02_g08726_MAGBIO Magnolia biondii HOM05D002111 ORTHO05D002160 1.0e-09 67.4 149 32.9
RcHm_v2.0_Chr2g0113891 Rosa chinensis HOM05D002111 ORTHO05D002160 2.2e-09 66.2 88 43.2
RcHm_v2.0_Chr2g0114391 Rosa chinensis HOM05D002111 ORTHO05D002160 2.2e-09 66.2 98 41.8
Ciclev10025897m.g Citrus clementina HOM05D002111 ORTHO05D002160 3.8e-09 65.5 100 42.0
CiPaw.03G141700 Carya illinoinensis HOM05D002111 ORTHO05D002160 5.0e-09 65.1 64 51.6
TWI53G1715 Tripterygium wilfordii HOM05D002111 ORTHO05D002160 8.5e-09 64.3 91 39.6
RcHm_v2.0_Chr2g0113971 Rosa chinensis HOM05D002111 ORTHO05D002160 1.5e-08 63.5 98 41.8
QL06p049551 Quercus lobata HOM05D002111 ORTHO05D002160 1.9e-08 63.2 73 45.2
CiPaw.04G099300 Carya illinoinensis HOM05D002111 ORTHO05D002160 3.2e-08 62.4 91 42.9
Duzib264G1191 Durio zibethinus HOM05D002111 ORTHO05D002160 4.2e-08 62.0 97 41.2
Prupe.6G186700 Prunus persica HOM05D002111 ORTHO05D002160 4.2e-08 62.0 90 42.2
Thecc.01G101700 Theobroma cacao HOM05D002111 ORTHO05D002160 4.2e-08 62.0 100 39.0
Hma1.2p1_0047F.1_g027840 Hydrangea macrophylla HOM05D002111 ORTHO05D002160 1.2e-07 60.5 105 41.9
RcHm_v2.0_Chr2g0114361 Rosa chinensis HOM05D002111 ORTHO05D002160 1.2e-07 60.5 88 39.8
Cpa.g.c38732 Carica papaya HOM05D002111 ORTHO05D002160 4.7e-07 58.5 83 42.2
AUR62002011 Chenopodium quinoa HOM05D002111 ORTHO05D002160 4.7e-07 58.5 46 50.0
vmacro12956 Vaccinium macrocarpon HOM05D002111 ORTHO05D002160 1.0e-06 57.4 103 36.9
Sc03g0002090 Simmondsia chinensis HOM05D002111 ORTHO05D002160 2.3e-06 56.2 89 37.1
Gohir.D12G085900 Gossypium hirsutum HOM05D002111 ORTHO05D002160 5.2e-06 55.1 99 32.3
Gorai.008G096200 Gossypium raimondii HOM05D002111 ORTHO05D002160 5.2e-06 55.1 99 32.3
MD15G1324300 Malus domestica HOM05D002111 ORTHO05D002160 5.2e-06 55.1 90 41.1
Hund13626 Selenicereus undatus HOM05D002111 ORTHO05D002160 6.7e-06 54.7 63 46.0
PSO210G4458 Papaver somniferum HOM05D002111 ORTHO05D002160 8.8e-06 54.3 73 42.5
PSO447G0066 Papaver somniferum HOM05D002111 ORTHO05D002160 8.8e-06 54.3 73 42.5


User provided reference genes

Program Settings