Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01371 Nelumbo nucifera HOM05D007015 ORTHO05D007679 2.1e-55 218.8 111 100.0
Nn1g04999 Nelumbo nucifera HOM05D007015 ORTHO05D007679 1.1e-51 206.5 110 93.6
TAR625G0084 Trochodendron aralioides HOM05D007015 ORTHO05D007679 2.7e-50 201.8 110 90.9
TAR625G0285 Trochodendron aralioides HOM05D007015 ORTHO05D007679 2.7e-50 201.8 110 90.9
COL.COLO4_25926 Corchorus olitorius HOM05D007015 ORTHO05D007679 1.3e-49 199.5 110 90.0
Nn5g29599 Nelumbo nucifera HOM05D007015 ORTHO05D007679 8.7e-49 196.8 110 89.1
Dinv23523 Davidia involucrata HOM05D007015 ORTHO05D007679 1.1e-48 196.4 110 89.1
Duzib132G0398 Durio zibethinus HOM05D007015 ORTHO05D007679 1.5e-48 196.1 110 88.2
Haze_02382 Corylus avellana HOM05D007015 ORTHO05D007679 2.5e-48 195.3 110 86.4
Ciclev10028323m.g Citrus clementina HOM05D007015 ORTHO05D007679 3.3e-48 194.9 110 86.4
Cfa005006 Carpinus fangiana HOM05D007015 ORTHO05D007679 4.3e-48 194.5 110 85.5
Gohir.A13G034500 Gossypium hirsutum HOM05D007015 ORTHO05D007679 5.6e-48 194.1 110 86.4
Gohir.D13G032901 Gossypium hirsutum HOM05D007015 ORTHO05D007679 5.6e-48 194.1 110 86.4
Gorai.013G037300 Gossypium raimondii HOM05D007015 ORTHO05D007679 5.6e-48 194.1 110 86.4
Lsat_1_v5_gn_9_109600 Lactuca sativa HOM05D007015 ORTHO05D007679 9.6e-48 193.4 110 84.5
Thecc.02G085800 Theobroma cacao HOM05D007015 ORTHO05D007679 9.6e-48 193.4 110 87.3
Duzib052G0472 Durio zibethinus HOM05D007015 ORTHO05D007679 1.6e-47 192.6 110 87.3
TWI79G1149 Tripterygium wilfordii HOM05D007015 ORTHO05D007679 2.8e-47 191.8 110 86.4
Lj9C370G1 Lonicera japonica HOM05D007015 ORTHO05D007679 3.6e-47 191.4 110 85.5
Lj9C372G4 Lonicera japonica HOM05D007015 ORTHO05D007679 3.6e-47 191.4 110 85.5
CiPaw.05G064200 Carya illinoinensis HOM05D007015 ORTHO05D007679 6.2e-47 190.7 110 84.5
CSS0034426 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 8.1e-47 190.3 110 85.5
CSS0043793 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 8.1e-47 190.3 110 85.5
Sabra04G0102600 Salix brachista HOM05D007015 ORTHO05D007679 8.1e-47 190.3 110 86.4
CiPaw.06G135500 Carya illinoinensis HOM05D007015 ORTHO05D007679 1.1e-46 189.9 110 83.6
ECA240G3875 Erigeron canadensis HOM05D007015 ORTHO05D007679 1.4e-46 189.5 110 83.6
Potri.004G154600 Populus trichocarpa HOM05D007015 ORTHO05D007679 1.4e-46 189.5 110 86.4
Manes.15G163500 Manihot esculenta HOM05D007015 ORTHO05D007679 1.8e-46 189.1 110 83.6
CAN.G1412.4 Capsicum annuum HOM05D007015 ORTHO05D007679 4.0e-46 188.0 110 81.8
Atru.chr5.3012 Acer truncatum HOM05D007015 ORTHO05D007679 1.5e-45 186.0 110 85.5
Migut.B00238 Erythranthe guttata HOM05D007015 ORTHO05D007679 1.5e-45 186.0 110 80.9
PGR142G1975 Punica granatum HOM05D007015 ORTHO05D007679 2.6e-45 185.3 110 82.7
Oeu020759.1 Olea europaea HOM05D007015 ORTHO05D007679 4.4e-45 184.5 110 80.9
THA.LOC104807318 Tarenaya hassleriana HOM05D007015 ORTHO05D007679 4.4e-45 184.5 110 80.0
SGA_v2.0_scaffold32G13158 Striga asiatica HOM05D007015 ORTHO05D007679 5.8e-45 184.1 110 80.0
Nitab4.5_0000308g0060 Nicotiana tabacum HOM05D007015 ORTHO05D007679 9.9e-45 183.3 110 80.0
Nitab4.5_0004172g0110 Nicotiana tabacum HOM05D007015 ORTHO05D007679 9.9e-45 183.3 110 80.0
Peaxi162Scf00016g00829 Petunia axillaris HOM05D007015 ORTHO05D007679 1.3e-44 183.0 110 79.1
Sopen01g051790 Solanum pennellii HOM05D007015 ORTHO05D007679 2.2e-44 182.2 110 79.1
PGSC0003DMG400000706 Solanum tuberosum HOM05D007015 ORTHO05D007679 2.9e-44 181.8 110 79.1
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 4.9e-44 181.0 110 78.2
CsaV3_7G023540 Cucumis sativus L. HOM05D007015 ORTHO05D007679 6.4e-44 180.6 110 80.9
Sed0022084 Sechium edule HOM05D007015 ORTHO05D007679 6.4e-44 180.6 110 80.9
MSTRG.20084 Avicennia marina HOM05D007015 ORTHO05D007679 8.4e-44 180.3 110 79.1
ClCG02G005030 Citrullus lanatus HOM05D007015 ORTHO05D007679 1.4e-43 179.5 110 80.9
vmacro02110 Vaccinium macrocarpon HOM05D007015 ORTHO05D007679 1.4e-43 179.5 114 78.9
Gohir.A12G028600 Gossypium hirsutum HOM05D007015 ORTHO05D007679 2.4e-43 178.7 110 79.1
MELO3C012524.2 Cucumis melo HOM05D007015 ORTHO05D007679 3.2e-43 178.3 110 80.0
Gorai.008G028700 Gossypium raimondii HOM05D007015 ORTHO05D007679 1.6e-42 176.0 110 78.2
HanXRQChr03g0061181 Helianthus annuus HOM05D007015 ORTHO05D007679 2.1e-42 175.6 111 78.4
Rhsim11G0176800 Rhododendron simsii HOM05D007015 ORTHO05D007679 2.7e-42 175.3 112 79.5
Sed0027719 Sechium edule HOM05D007015 ORTHO05D007679 1.0e-41 173.3 110 77.3
PSO700G0017 Papaver somniferum HOM05D007015 ORTHO05D007679 1.7e-41 172.6 110 76.4
MSTRG.27699 Avicennia marina HOM05D007015 ORTHO05D007679 3.0e-41 171.8 110 77.3
ATR0733G072 Amborella trichopoda HOM05D007015 ORTHO05D007679 6.6e-41 170.6 110 77.3
QL11p043649 Quercus lobata HOM05D007015 ORTHO05D007679 8.7e-41 170.2 110 73.6
SalBow3G2347 Salvia bowleyana HOM05D007015 ORTHO05D007679 3.3e-40 168.3 109 74.3
Sc14g0002090 Simmondsia chinensis HOM05D007015 ORTHO05D007679 4.3e-40 167.9 110 74.5
FvH4_2g08750 Fragaria vesca HOM05D007015 ORTHO05D007679 7.3e-40 167.2 110 75.5
FAN15G1974 Fragaria x ananassa HOM05D007015 ORTHO05D007679 7.3e-40 167.2 110 75.5
CDE04G3710 Ceratophyllum demersum HOM05D007015 ORTHO05D007679 9.6e-40 166.8 110 77.3
MSTRG.5397 Avicennia marina HOM05D007015 ORTHO05D007679 1.3e-39 166.4 110 71.8
EL10Ac9g21726 Beta vulgaris HOM05D007015 ORTHO05D007679 1.6e-39 166.0 110 75.5
FAN24G0062 Fragaria x ananassa HOM05D007015 ORTHO05D007679 1.6e-39 166.0 110 75.5
Hund06231 Selenicereus undatus HOM05D007015 ORTHO05D007679 1.6e-39 166.0 110 72.7
Lalb_Chr01g0002571 Lupinus albus HOM05D007015 ORTHO05D007679 2.1e-39 165.6 110 74.5
MD05G1066700 Malus domestica HOM05D007015 ORTHO05D007679 2.8e-39 165.2 110 73.6
CDE02G1906 Ceratophyllum demersum HOM05D007015 ORTHO05D007679 3.6e-39 164.9 110 77.3
FAN20G1161 Fragaria x ananassa HOM05D007015 ORTHO05D007679 4.8e-39 164.5 110 74.5
Ah.01g019410 Amaranthus hybridus HOM05D007015 ORTHO05D007679 1.1e-38 163.3 110 71.8
RcHm_v2.0_Chr6g0264211 Rosa chinensis HOM05D007015 ORTHO05D007679 1.8e-38 162.5 110 71.8
MD10G1076600 Malus domestica HOM05D007015 ORTHO05D007679 2.4e-38 162.2 110 72.7
arahy.Tifrunner.gnm1.ann1.VXY3NA Arachis hypogaea HOM05D007015 ORTHO05D007679 4.0e-38 161.4 110 71.8
unitig_744.g24247 Utricularia gibba HOM05D002700 ORTHO05D003228 4.0e-38 161.4 110 68.2
CSS0036295 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 6.9e-38 160.6 110 73.6
arahy.Tifrunner.gnm1.ann1.9AGX7Y Arachis hypogaea HOM05D007015 ORTHO05D007679 9.0e-38 160.2 110 70.9
SEGI_27995 Sequoiadendron giganteum HOM05D007015 ORTHO05D007679 1.2e-37 159.8 110 72.7
AUR62011326 Chenopodium quinoa HOM05D007015 ORTHO05D007679 1.5e-37 159.5 110 71.8
MBI16_g42991_MAGBIO Magnolia biondii HOM05D007015 ORTHO05D007679 1.5e-37 159.5 112 72.3
Glyma.11G118100 Glycine max HOM05D007015 ORTHO05D007679 2.6e-37 158.7 110 72.7
Phvul.011G045500 Phaseolus vulgaris HOM05D007015 ORTHO05D007679 2.6e-37 158.7 110 71.8
Hund00268 Selenicereus undatus HOM05D007015 ORTHO05D007679 3.4e-37 158.3 110 69.1
AUR62016734 Chenopodium quinoa HOM05D007015 ORTHO05D007679 4.5e-37 157.9 110 70.9
Aqoxy5G01645 Aquilegia oxysepala HOM05D007015 ORTHO05D007679 5.8e-37 157.5 110 72.7
Lj3g0008828 Lotus japonicus HOM05D007015 ORTHO05D007679 7.6e-37 157.1 110 71.8
Prupe.8G097400 Prunus persica HOM05D007015 ORTHO05D007679 7.6e-37 157.1 110 69.1
VMungo1127G1579 Vigna mungo HOM05D007015 ORTHO05D007679 7.6e-37 157.1 110 70.9
Gohir.D12G028100 Gossypium hirsutum HOM05D007015 ORTHO05D007679 1.3e-36 156.4 110 71.8
Glyma.12G043500 Glycine max HOM05D007015 ORTHO05D007679 1.7e-36 156.0 110 71.8
Psat7g184640 Pisum sativum HOM05D007015 ORTHO05D007679 7.1e-35 150.6 110 70.0
TPR.G20759 Trifolium pratense HOM05D007015 ORTHO05D007679 9.3e-35 150.2 110 69.1
Ca_20873_v3 Cicer arietinum L. HOM05D007015 ORTHO05D007679 6.0e-34 147.5 110 67.3
Medtr4g070010 Medicago truncatula HOM05D007015 ORTHO05D007679 1.0e-33 146.7 112 67.0
Eucgr.I01267 Eucalyptus grandis HOM05D007015 ORTHO05D007679 1.5e-32 142.9 115 67.0
DCAR_028986 Daucus carota HOM05D007015 ORTHO05D007679 7.4e-32 140.6 110 63.6
TAR381G1286 Trochodendron aralioides HOM05D007015 ORTHO05D007679 3.7e-31 138.3 110 68.2
HPP92_013431 Vanilla planifolia HOM05D007015 ORTHO05D007679 1.1e-30 136.7 110 65.5
HPP92_027117 Vanilla planifolia HOM05D007015 ORTHO05D007679 1.1e-30 136.7 110 65.5
Pp3c1_20790 Physcomitrium patens HOM05D007015 ORTHO05D007679 1.2e-29 133.3 110 60.0
SMO367G0892 Selaginella moellendorffii HOM05D007015 ORTHO05D007679 7.6e-29 130.6 110 60.0
Actinidia00522 Actinidia chinensis HOM05D007015 ORTHO05D007679 2.2e-28 129.0 76 84.2
Pp3c14_3730 Physcomitrium patens HOM05D007015 ORTHO05D007679 2.2e-28 129.0 110 56.4
Os03g0723600 Oryza sativa ssp. japonica HOM05D007015 ORTHO05D007679 2.1e-26 122.5 112 57.1
Zm00001eb215850 Zea mays HOM05D007015 ORTHO05D007679 7.9e-26 120.6 112 55.4
AagrBONN_evm.TU.Sc2ySwM_117.322 Anthoceros agrestis HOM05D007015 ORTHO05D007679 6.7e-25 117.5 110 54.5
CBR_g34278 Chara braunii HOM05D007015 ORTHO05D007679 1.9e-24 115.9 110 54.5
VMungo1080G1863 Vigna mungo HOM05D007015 ORTHO05D007679 1.6e-15 86.3 66 65.2
SGA_v2.0_scaffold64G21857 Striga asiatica HOM05D007015 ORTHO05D007679 3.4e-13 78.6 60 61.7


User provided reference genes

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