Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 4.4e-144 514.6 258 100.0
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 4.7e-90 335.1 253 68.4
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 2.4e-86 322.8 257 68.9
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 5.4e-86 321.6 259 65.3
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 9.2e-86 320.9 258 66.7
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 1.6e-85 320.1 256 65.2
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 8.6e-84 314.3 264 63.6
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.2e-82 310.5 261 63.2
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.4e-80 302.4 258 62.4
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 4.4e-80 302.0 257 63.4
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 5.8e-80 301.6 257 62.6
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.3e-79 300.4 255 62.4
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 1.3e-79 300.4 256 62.9
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 2.9e-79 299.3 255 62.4
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 4.9e-79 298.5 253 62.1
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 6.4e-79 298.1 260 62.3
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.1e-78 297.4 259 61.0
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 1.1e-78 297.4 258 61.6
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.9e-78 296.6 259 62.2
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 7.1e-78 294.7 255 62.0
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.6e-77 293.5 257 60.7
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 2.1e-77 293.1 260 62.7
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.6e-77 292.0 257 60.7
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 6.0e-77 291.6 258 60.9
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 1.3e-76 290.4 255 60.4
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 2.3e-76 289.7 260 59.6
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 3.0e-76 289.3 260 62.3
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 3.0e-76 289.3 255 61.6
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 5.1e-76 288.5 261 61.7
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 5.6e-75 285.0 257 59.5
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 5.6e-75 285.0 257 59.1
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 7.3e-75 284.6 203 70.0
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 9.6e-75 284.3 211 69.7
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 9.6e-75 284.3 255 60.0
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.3e-74 283.9 260 59.2
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 1.3e-74 283.9 255 58.4
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 2.8e-74 282.7 224 66.1
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 2.8e-74 282.7 260 60.8
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 3.6e-74 282.3 253 58.9
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 3.6e-74 282.3 229 62.9
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 3.6e-74 282.3 253 58.1
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 4.8e-74 282.0 229 62.4
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 8.1e-74 281.2 203 69.5
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 8.1e-74 281.2 254 57.5
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 4.0e-73 278.9 221 64.7
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 4.0e-73 278.9 259 58.3
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 5.3e-73 278.5 257 58.8
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 1.2e-72 277.3 229 61.6
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.5e-72 276.9 253 58.9
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 2.0e-72 276.6 260 58.8
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 2.6e-72 276.2 258 57.0
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 7.6e-72 274.6 254 56.3
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 7.6e-72 274.6 255 58.8
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 9.9e-72 274.2 258 57.0
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 1.3e-71 273.9 253 60.1
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 2.2e-71 273.1 228 61.4
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 3.8e-71 272.3 260 58.8
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 4.9e-71 271.9 188 69.7
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 6.4e-71 271.6 213 64.3
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 8.4e-71 271.2 261 58.6
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 1.4e-70 270.4 257 57.6
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.9e-70 270.0 256 57.4
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 9.3e-70 267.7 193 69.9
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 1.6e-69 266.9 258 58.1
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 2.1e-69 266.5 256 55.1
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 7.9e-69 264.6 205 64.9
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 1.7e-68 263.5 215 62.8
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.7e-68 263.5 235 57.0
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 5.1e-68 261.9 253 57.7
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 8.7e-68 261.2 260 58.8
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 4.3e-67 258.8 258 55.8
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.6e-66 256.9 214 60.3
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.4e-65 253.8 260 56.2
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.3e-63 247.3 238 55.9
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 4.9e-63 245.4 171 69.6
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 9.3e-62 241.1 225 57.8
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 9.3e-62 241.1 203 58.1
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.6e-61 240.4 193 64.2
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 4.6e-61 238.8 233 54.9
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 7.9e-61 238.0 223 56.5
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 1.0e-60 237.7 257 51.4
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 2.3e-60 236.5 221 56.6
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 2.3e-60 236.5 221 56.6
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 3.9e-60 235.7 232 56.9
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 3.9e-60 235.7 211 60.2
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 3.9e-60 235.7 233 54.9
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 5.1e-60 235.3 232 54.7
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 8.7e-60 234.6 184 62.0
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 5.6e-59 231.9 221 55.7
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 7.4e-59 231.5 221 55.7
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 1.8e-57 226.9 234 53.4
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 5.8e-56 221.9 141 72.3
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 8.4e-55 218.0 177 59.3
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 3.9e-52 209.1 184 58.7
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 2.1e-50 203.4 139 69.8
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 8.2e-50 201.4 199 50.3
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 1.2e-48 197.6 178 53.9
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 1.4e-46 190.7 176 50.6
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.1e-45 186.8 180 51.1
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 3.5e-45 186.0 181 49.7
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.3e-44 184.1 259 47.1
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.8e-44 183.7 204 46.1
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 8.2e-42 174.9 175 50.3
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 3.4e-40 169.5 223 43.9
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.4e-38 164.1 222 45.0
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 4.8e-34 149.1 227 38.3
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 6.9e-33 145.2 163 50.3
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 3.4e-32 142.9 172 50.6
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.4e-30 137.5 88 71.6
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 1.8e-28 130.6 136 52.9
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.0e-23 114.8 173 37.6
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 1.4e-20 104.4 83 60.2
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 2.3e-20 103.6 168 38.7
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 4.5e-16 89.4 96 43.8
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 1.7e-15 87.4 66 60.6
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 3.8e-15 86.3 179 35.2
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 9.8e-11 71.6 91 48.4
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 9.8e-11 71.6 75 49.3
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 8.5e-07 58.5 50 60.0
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 3.2e-06 56.6 117 35.0
HPP92_026872 Vanilla planifolia HOM05D007174 ORTHO05D009061 7.2e-06 55.5 94 35.1


User provided reference genes

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