Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 1.0e-73 280.0 145 100.0
Nn4g26411 Nelumbo nucifera HOM05D008269 ORTHO05D010153 4.2e-19 98.6 143 49.7
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 3.0e-17 92.4 135 45.2
Aqoxy7G00619 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 1.3e-15 87.0 146 41.1
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 5.3e-14 81.6 131 45.0
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 1.5e-13 80.1 136 42.6
Thecc.03G161400 Theobroma cacao HOM05D008269 ORTHO05D010153 2.0e-13 79.7 137 44.5
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 2.6e-13 79.3 142 38.0
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 5.9e-13 78.2 134 42.5
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 7.7e-13 77.8 147 39.5
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 1.0e-12 77.4 136 41.9
Manes.02G153600 Manihot esculenta HOM05D008269 ORTHO05D010153 1.3e-12 77.0 120 39.2
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 1.3e-12 77.0 138 39.9
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 1.7e-12 76.6 132 41.7
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 2.2e-12 76.3 152 37.5
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 5.0e-12 75.1 140 37.9
Aqoxy7G00620 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 1.4e-11 73.6 140 36.4
CiPaw.03G096800 Carya illinoinensis HOM05D008269 ORTHO05D010153 1.9e-11 73.2 132 39.4
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 4.2e-11 72.0 141 39.0
Migut.F00432 Erythranthe guttata HOM05D008269 ORTHO05D010153 5.5e-11 71.6 140 33.6
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 5.5e-11 71.6 138 38.4
Haze_17962 Corylus avellana HOM05D008269 ORTHO05D010153 7.2e-11 71.2 134 41.8
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 7.2e-11 71.2 128 40.6
CiPaw.04G062800 Carya illinoinensis HOM05D008269 ORTHO05D010153 9.4e-11 70.9 137 37.2
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 1.2e-10 70.5 137 41.6
Oeu022504.1 Olea europaea HOM05D008269 ORTHO05D010153 1.2e-10 70.5 123 42.3
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 1.6e-10 70.1 135 37.8
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 6.1e-10 68.2 135 40.7
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 7.9e-10 67.8 141 34.0
Peaxi162Scf00032g00022 Petunia axillaris HOM05D012743 ORTHO05D017764 7.9e-10 67.8 163 35.6
PGR047G0001 Punica granatum HOM05D008269 ORTHO05D010153 1.8e-09 66.6 128 39.1
Aqoxy7G00618 Aquilegia oxysepala HOM05D008269 ORTHO05D010153 2.3e-09 66.2 156 33.3
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 3.0e-09 65.9 135 40.0
DCAR_018124 Daucus carota HOM05D008269 ORTHO05D010153 1.1e-08 63.9 129 39.5
MSTRG.8421 Avicennia marina HOM05D008269 ORTHO05D010153 1.5e-08 63.5 127 40.9
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.5e-08 62.8 125 40.0
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 2.5e-08 62.8 113 43.4
Oeu021725.1 Olea europaea HOM05D012743 ORTHO05D010153 3.3e-08 62.4 159 32.7
Nitab4.5_0002786g0070 Nicotiana tabacum HOM05D012743 ORTHO05D010153 4.3e-08 62.0 137 34.3
Dinv28535 Davidia involucrata HOM05D008269 ORTHO05D010153 5.7e-08 61.6 103 40.8
FvH4_7g28170 Fragaria vesca HOM05D008269 ORTHO05D010153 5.7e-08 61.6 144 33.3
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 9.7e-08 60.8 124 41.9
SalBow4G0749 Salvia bowleyana HOM05D008269 ORTHO05D010153 9.7e-08 60.8 123 35.0
Lsat_1_v5_gn_8_8201 Lactuca sativa HOM05D055346 ORTHO05D010153 1.3e-07 60.5 138 34.8
SalBow2G2015 Salvia bowleyana HOM05D008269 ORTHO05D010153 2.2e-07 59.7 139 34.5
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 4.8e-07 58.5 136 35.3
TPR.G10665 Trifolium pratense HOM05D008269 ORTHO05D010153 4.8e-07 58.5 151 32.5
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 1.4e-06 57.0 138 34.8
CANSAT21G0510 Cannabis sativa HOM05D008269 ORTHO05D010153 2.4e-06 56.2 146 32.9
Nitab4.5_0002786g0040 Nicotiana tabacum HOM05D012743 ORTHO05D017764 2.4e-06 56.2 209 29.7
Glyma.10G177800 Glycine max HOM05D008269 ORTHO05D010153 3.1e-06 55.8 149 31.5
Glyma.16G204500 Glycine max HOM05D008269 ORTHO05D010153 3.1e-06 55.8 141 34.0
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 4.1e-06 55.5 137 34.3
Phvul.007G111700 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 5.3e-06 55.1 138 34.1
Nn4g26412 Nelumbo nucifera HOM05D063116 ORTHO05D012091 9.1e-06 54.3 122 32.0


User provided reference genes

Program Settings