Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 0.0e+00 1136.3 597 100.0
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 4.9e-191 671.8 580 66.4
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 2.1e-186 656.4 591 65.0
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 6.5e-183 644.8 578 63.8
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 1.9e-182 643.3 578 62.8
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 4.1e-177 625.5 575 62.6
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 2.2e-175 619.8 577 62.4
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 2.9e-175 619.4 575 63.0
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 5.5e-174 615.1 573 62.0
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 8.2e-170 601.3 583 62.4
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 3.1e-169 599.4 583 61.1
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 6.5e-167 591.7 576 60.6
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 2.5e-166 589.7 581 60.2
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.6e-165 587.0 572 61.4
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 2.0e-163 580.1 561 62.4
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 9.7e-163 577.8 576 59.5
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 2.2e-162 576.6 573 58.6
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 4.8e-162 575.5 576 57.8
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 3.8e-159 565.8 583 56.9
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 3.2e-158 562.8 574 58.2
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 7.2e-158 561.6 577 57.4
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 9.4e-158 561.2 574 58.0
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 6.1e-157 558.5 572 58.6
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 1.0e-156 557.8 573 57.4
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 3.0e-156 556.2 569 58.2
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 5.2e-156 555.4 574 57.0
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 7.4e-155 551.6 577 57.4
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 1.7e-154 550.4 571 57.4
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 3.7e-154 549.3 574 57.8
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 4.8e-154 548.9 574 57.8
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.1e-153 547.7 574 57.5
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 4.1e-153 545.8 576 57.1
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.3e-151 540.8 577 56.0
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 2.9e-151 539.7 578 56.7
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.1e-150 537.7 577 56.2
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 6.1e-149 531.9 575 55.1
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 1.8e-148 530.4 582 55.0
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 6.7e-148 528.5 576 55.0
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 1.5e-147 527.3 579 55.6
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 2.6e-147 526.6 576 53.1
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 5.7e-147 525.4 581 54.4
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 5.7e-147 525.4 587 53.7
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.7e-146 523.9 601 53.6
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 2.2e-146 523.5 611 53.0
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 2.8e-146 523.1 641 52.3
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 4.8e-146 522.3 585 54.7
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 8.2e-146 521.5 578 55.9
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 1.1e-145 521.2 581 53.7
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.4e-145 520.8 583 52.1
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 2.0e-144 516.9 589 53.7
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 2.0e-144 516.9 576 55.9
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 3.5e-144 516.2 576 54.7
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.3e-143 514.2 577 54.1
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 5.5e-142 508.8 576 53.3
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 1.2e-141 507.7 586 53.6
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 8.0e-141 505.0 586 53.6
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 8.8e-140 501.5 434 64.1
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 8.8e-140 501.5 584 53.8
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 8.8e-140 501.5 596 52.7
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 2.0e-139 500.4 573 55.0
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 7.5e-139 498.4 577 52.3
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.7e-138 497.3 578 53.8
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 9.1e-137 491.5 584 52.1
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.6e-136 490.7 563 55.2
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 7.7e-136 488.4 577 52.5
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 7.7e-136 488.4 580 51.9
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.3e-135 486.9 552 55.1
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 9.5e-134 481.5 577 52.3
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 2.1e-133 480.3 453 62.7
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 2.3e-132 476.9 593 51.3
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 5.2e-132 475.7 574 52.4
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 5.7e-131 472.2 572 50.7
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 1.8e-129 467.2 585 50.8
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 4.1e-129 466.1 590 49.8
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.9e-127 459.9 555 52.4
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.6e-125 454.1 556 50.0
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 4.7e-125 452.6 580 50.5
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 4.0e-124 449.5 590 50.3
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 3.4e-123 446.4 601 47.9
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 3.4e-123 446.4 495 56.4
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 1.9e-121 440.7 576 47.2
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.4e-121 440.3 494 56.1
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 3.2e-121 439.9 494 56.1
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 3.5e-120 436.4 585 48.0
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 4.6e-120 436.0 584 47.1
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 2.3e-119 433.7 593 47.0
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 1.5e-115 421.0 443 54.0
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 7.5e-115 418.7 421 54.6
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.0e-111 406.8 604 46.5
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 6.6e-111 405.6 459 53.2
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 2.5e-110 403.7 420 53.6
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 2.1e-109 400.6 419 52.7
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 8.9e-108 395.2 425 53.4
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 4.9e-106 389.4 438 52.1
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 1.3e-103 381.3 418 52.2
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 1.5e-102 377.9 419 51.3
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 1.5e-102 377.9 419 51.3
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.5e-99 367.9 441 49.9
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.0e-87 328.6 276 59.4
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.5e-86 323.9 513 46.4
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 6.4e-82 309.3 583 38.9
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 2.4e-81 307.4 579 40.4
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 1.0e-79 302.0 442 42.1
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 4.6e-72 276.6 278 54.3
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 7.7e-59 232.6 303 51.5
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 7.4e-54 216.1 225 50.2
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 6.5e-50 203.0 206 58.3
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 2.7e-48 197.6 335 45.1
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 3.7e-45 187.2 457 31.3
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 2.3e-39 167.9 511 28.6
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 3.5e-27 127.5 165 49.1
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 2.1e-24 118.2 485 26.4
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 3.6e-16 90.9 196 43.4
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 1.8e-12 78.6 50 70.0
Aqoxy2G02051 Aquilegia oxysepala HOM05D004629 ORTHO05D004559 8.6e-10 69.7 182 30.8


User provided reference genes

Program Settings