Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.1e-99 366.7 188 100.0
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 2.1e-95 352.4 181 99.4
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 8.8e-70 267.3 180 76.1
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 2.5e-64 249.2 178 71.3
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 3.2e-64 248.8 178 74.7
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 4.7e-63 245.0 175 72.6
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 4.4e-61 238.4 174 71.3
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 2.2e-60 236.1 175 69.7
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 4.5e-58 228.4 177 67.8
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 2.9e-57 225.7 178 66.9
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 1.5e-56 223.4 176 66.5
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 4.3e-56 221.9 178 64.6
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 3.6e-55 218.8 174 65.5
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.3e-54 216.1 181 62.4
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 4.0e-54 215.3 179 65.4
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 4.0e-54 215.3 176 62.5
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 5.2e-54 214.9 176 61.9
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 6.8e-54 214.5 175 62.9
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 8.9e-54 214.2 177 62.1
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 1.2e-53 213.8 178 63.5
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 1.2e-53 213.8 170 65.9
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 2.0e-53 213.0 176 60.8
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 2.0e-53 213.0 176 61.9
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 1.3e-52 210.3 183 62.3
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 2.2e-52 209.5 182 63.2
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 3.2e-51 205.7 178 62.4
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 5.4e-51 204.9 179 60.3
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 5.4e-51 204.9 175 61.1
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 7.0e-51 204.5 181 60.2
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 7.0e-51 204.5 181 60.2
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 9.2e-51 204.1 179 63.7
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 9.2e-51 204.1 190 60.0
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.6e-50 203.4 179 60.3
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 3.5e-50 202.2 184 57.6
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 3.5e-50 202.2 190 59.5
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 4.6e-50 201.8 187 61.5
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 5.9e-50 201.4 177 63.3
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 5.9e-50 201.4 176 60.2
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 1.3e-49 200.3 180 61.7
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 3.0e-49 199.1 177 62.1
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 5.0e-49 198.4 178 60.7
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 5.0e-49 198.4 177 57.6
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 3.3e-48 195.7 179 58.7
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 4.3e-48 195.3 178 56.7
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 5.6e-48 194.9 188 60.6
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 1.2e-47 193.7 179 58.7
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 2.1e-47 193.0 178 57.9
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 3.6e-47 192.2 178 57.9
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 4.7e-47 191.8 181 60.2
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 8.0e-47 191.0 181 60.2
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 8.0e-47 191.0 177 59.3
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 1.8e-46 189.9 183 57.4
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 3.1e-46 189.1 181 56.9
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 3.1e-46 189.1 178 56.2
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.5e-45 186.8 176 60.2
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 1.5e-45 186.8 180 56.1
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.0e-45 186.4 174 55.7
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 2.6e-45 186.0 181 56.4
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 5.8e-45 184.9 181 56.4
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.3e-44 183.7 178 54.5
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 1.7e-44 183.3 182 55.5
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 2.2e-44 183.0 189 55.0
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 2.2e-44 183.0 181 56.4
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 3.7e-44 182.2 178 52.8
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 1.9e-43 179.9 178 58.4
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.4e-43 179.5 173 53.8
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 3.2e-43 179.1 174 54.0
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 3.2e-43 179.1 179 55.3
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 4.1e-43 178.7 181 57.5
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 9.2e-43 177.6 172 56.4
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 9.2e-43 177.6 178 54.5
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.7e-42 176.0 175 54.3
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 2.7e-42 176.0 175 54.3
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 6.0e-42 174.9 173 53.8
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 7.8e-42 174.5 178 53.9
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 1.7e-41 173.3 178 53.9
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 2.3e-41 172.9 168 53.6
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 2.3e-41 172.9 175 53.7
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 3.9e-41 172.2 169 55.0
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 3.9e-41 172.2 175 53.1
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.1e-40 170.6 176 55.7
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.5e-40 170.2 173 53.8
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 2.5e-40 169.5 114 71.1
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 3.3e-40 169.1 173 53.2
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 3.3e-40 169.1 175 55.4
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 4.3e-40 168.7 178 53.4
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 7.3e-40 167.9 153 59.5
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 9.5e-40 167.5 175 52.6
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 1.6e-39 166.8 171 55.6
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 4.7e-39 165.2 170 52.9
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 3.1e-38 162.5 171 55.6
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 1.2e-37 160.6 171 53.8
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 1.5e-37 160.2 180 50.6
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 2.6e-37 159.5 170 53.5
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 4.4e-37 158.7 173 49.7
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 5.8e-37 158.3 170 52.4
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 1.7e-36 156.8 171 52.6
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 2.2e-36 156.4 183 56.3
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 2.2e-36 156.4 177 49.7
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 2.9e-36 156.0 170 53.5
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 1.1e-35 154.1 180 52.8
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 1.4e-35 153.7 176 48.3
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 1.9e-35 153.3 175 48.6
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.9e-35 153.3 176 49.4
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 3.2e-35 152.5 176 47.7
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 4.1e-35 152.1 187 49.7
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 9.2e-35 151.0 181 47.5
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 9.2e-35 151.0 181 51.4
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 1.2e-34 150.6 177 48.6
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 1.6e-34 150.2 181 47.5
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 1.6e-34 150.2 176 50.0
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 2.7e-34 149.4 177 48.0
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 4.6e-34 148.7 177 48.0
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 4.6e-34 148.7 181 48.6
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 1.0e-33 147.5 184 50.5
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 8.6e-33 144.4 179 44.7
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 1.5e-32 143.7 176 43.8
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 7.3e-32 141.4 181 48.6
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 9.5e-32 141.0 177 46.9
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 6.2e-31 138.3 175 46.9
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 2.4e-30 136.3 177 44.1
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 2.4e-30 136.3 177 44.1
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 3.1e-30 136.0 178 44.9
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 3.1e-30 136.0 178 44.9
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 2.6e-29 132.9 175 43.4
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 3.4e-29 132.5 111 57.7
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 2.2e-28 129.8 114 62.3
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 1.4e-27 127.1 181 43.6
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 7.3e-24 114.8 187 40.6
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 9.6e-16 87.8 188 29.8
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 5.8e-13 78.6 172 30.2
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 3.2e-11 72.8 171 27.5
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 1.2e-10 70.9 114 36.0
Cre03.g213425 Chlamydomonas reinhardtii HOM05D005835 ORTHO05D145454 9.0e-06 54.7 104 36.5


User provided reference genes

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