Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01056 Nelumbo nucifera HOM05D008749 ORTHO05D010891 6.1e-36 153.7 81 100.0
TAR375G1081 Trochodendron aralioides HOM05D008749 ORTHO05D010891 1.2e-18 96.3 74 74.3
Actinidia05197 Actinidia chinensis HOM05D008749 ORTHO05D010891 2.5e-13 78.6 68 67.6
Dinv21615 Davidia involucrata HOM05D000220 ORTHO05D010891 3.3e-13 78.2 63 68.3
Nn1g01060 Nelumbo nucifera HOM05D008749 ORTHO05D010891 3.6e-12 74.7 66 65.2
EL10Ac5g13038 Beta vulgaris HOM05D008749 ORTHO05D010891 4.7e-12 74.3 59 66.1
HanXRQChr17g0549861 Helianthus annuus HOM05D008749 ORTHO05D010891 8.1e-12 73.6 73 58.9
Actinidia27461 Actinidia chinensis HOM05D008749 ORTHO05D010891 1.8e-11 72.4 74 60.8
Dinv21614 Davidia involucrata HOM05D008749 ORTHO05D010891 2.3e-11 72.0 77 62.3
Dinv28567 Davidia involucrata HOM05D008749 ORTHO05D010891 2.3e-11 72.0 59 64.4
Eucgr.E00449 Eucalyptus grandis HOM05D008749 ORTHO05D010891 4.0e-11 71.2 74 62.2
Nn6g34014 Nelumbo nucifera HOM05D008749 ORTHO05D010891 5.2e-11 70.9 71 59.2
MBI04_g32486_MAGBIO Magnolia biondii HOM05D008749 ORTHO05D010891 1.2e-10 69.7 59 67.8
FAN18G0269 Fragaria x ananassa HOM05D008749 ORTHO05D010891 1.5e-10 69.3 66 59.1
Nn6g34013 Nelumbo nucifera HOM05D008749 ORTHO05D010891 1.5e-10 69.3 79 57.0
Atru.chr9.1350 Acer truncatum HOM05D008749 ORTHO05D010891 2.6e-10 68.6 76 60.5
A01p13770 Brassica napus HOM05D008749 ORTHO05D010891 9.9e-10 66.6 82 57.3
HanXRQChr17g0549911 Helianthus annuus HOM05D008749 ORTHO05D010891 9.9e-10 66.6 66 57.6
SGA_v2.0_scaffold120G32865 Striga asiatica HOM05D008749 ORTHO05D010891 9.9e-10 66.6 79 57.0
Zm00001eb000430 Zea mays HOM05D008749 ORTHO05D010891 6.4e-09 63.9 58 58.6
AT4G22463 Arabidopsis thaliana HOM05D008749 ORTHO05D010891 8.3e-09 63.5 79 53.2
AT1G62515 Arabidopsis thaliana HOM05D008749 ORTHO05D010891 1.9e-08 62.4 60 58.3
Nitab4.5_0006435g0010 Nicotiana tabacum HOM05D008749 ORTHO05D010891 9.2e-08 60.1 59 52.5
Lj8C259T8 Lonicera japonica HOM05D008749 ORTHO05D010891 1.2e-07 59.7 72 51.4
TAR626G1276 Trochodendron aralioides HOM05D038201 ORTHO05D023277 1.2e-07 59.7 69 53.6
ECA247G1192 Erigeron canadensis HOM05D008749 ORTHO05D010891 4.6e-07 57.8 56 60.7
Ah.02g116800 Amaranthus hybridus HOM05D008749 ORTHO05D010891 6.0e-07 57.4 73 49.3
Lsat_1_v5_gn_6_2881 Lactuca sativa HOM05D008749 ORTHO05D010891 6.0e-07 57.4 79 50.6
Thecc.09G022700 Theobroma cacao HOM05D008749 ORTHO05D010891 6.0e-07 57.4 58 60.3
Cc06_g22410 Coffea canephora HOM05D008749 ORTHO05D010891 1.0e-06 56.6 59 55.9
EL10Ac5g13045 Beta vulgaris HOM05D008749 ORTHO05D010891 3.0e-06 55.1 80 50.0
Migut.M00127 Erythranthe guttata HOM05D013672 ORTHO05D012850 5.1e-06 54.3 79 46.8
EL10Ac5g13042 Beta vulgaris HOM05D008749 ORTHO05D010891 8.6e-06 53.5 59 54.2
FAN15G1908 Fragaria x ananassa HOM05D019040 ORTHO05D010891 8.6e-06 53.5 78 52.6


User provided reference genes

Program Settings