Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g01052 Nelumbo nucifera HOM05D008230 ORTHO05D010279 1.3e-75 286.2 137 100.0
Nn6g34001 Nelumbo nucifera HOM05D008230 ORTHO05D010279 7.7e-23 110.9 167 45.5
CiPaw.14G026100 Carya illinoinensis HOM05D008230 ORTHO05D010279 5.3e-16 88.2 150 40.0
Phvul.010G077800 Phaseolus vulgaris HOM05D008230 ORTHO05D010279 3.5e-15 85.5 137 39.4
Lj3g0026436 Lotus japonicus HOM05D008230 ORTHO05D010279 1.0e-14 84.0 138 39.1
QL04p038908 Quercus lobata HOM05D008230 ORTHO05D010279 1.5e-13 80.1 143 38.5
Glyma.03G031600 Glycine max HOM05D008230 ORTHO05D010279 1.9e-13 79.7 141 36.2
CiPaw.13G032900 Carya illinoinensis HOM05D008230 ORTHO05D010279 2.5e-13 79.3 152 38.2
Glyma.01G136600 Glycine max HOM05D008230 ORTHO05D010279 4.2e-13 78.6 145 40.0
VMungo0331G0239 Vigna mungo HOM05D008230 ORTHO05D010279 5.5e-13 78.2 138 42.0
Thecc.01G382000 Theobroma cacao HOM05D008230 ORTHO05D010279 1.2e-12 77.0 142 44.4
Manes.05G048600 Manihot esculenta HOM05D008230 ORTHO05D010279 4.7e-12 75.1 149 37.6
Cfa011173 Carpinus fangiana HOM05D008230 ORTHO05D010279 1.4e-11 73.6 139 40.3
Potri.014G060400 Populus trichocarpa HOM05D008230 ORTHO05D010279 1.8e-11 73.2 151 34.4
Psat7g237760 Pisum sativum HOM05D008230 ORTHO05D010279 8.8e-11 70.9 132 33.3
Lalb_Chr03g0039781 Lupinus albus HOM05D008230 ORTHO05D010279 2.6e-10 69.3 141 36.2
Sabra14G0044300 Salix brachista HOM05D008230 ORTHO05D010279 2.6e-10 69.3 152 33.6
arahy.Tifrunner.gnm1.ann1.MFP8ME Arachis hypogaea HOM05D008230 ORTHO05D010279 3.4e-10 68.9 144 35.4
Haze_02676 Corylus avellana HOM05D008230 ORTHO05D010279 7.5e-10 67.8 141 35.5
Prupe.2G138500 Prunus persica HOM05D008230 ORTHO05D010279 1.3e-09 67.0 155 30.3
Potri.002G144400 Populus trichocarpa HOM05D008230 ORTHO05D010279 1.7e-09 66.6 138 34.1
Lalb_Chr12g0208001 Lupinus albus HOM05D008230 ORTHO05D010279 2.8e-09 65.9 127 35.4
Dinv43677 Davidia involucrata HOM05D008230 ORTHO05D010279 6.3e-09 64.7 140 35.0
TPR.G4997 Trifolium pratense HOM05D008230 ORTHO05D010279 6.3e-09 64.7 136 36.0
MD07G1116200 Malus domestica HOM05D008230 ORTHO05D010279 8.3e-09 64.3 153 32.7
CANSAT56G1720 Cannabis sativa HOM05D008230 ORTHO05D010279 1.4e-08 63.5 148 33.8
COL.COLO4_12495 Corchorus olitorius HOM05D008230 ORTHO05D010279 1.4e-08 63.5 61 52.5
Sabra02G0112300 Salix brachista HOM05D008230 ORTHO05D010279 3.1e-08 62.4 142 33.1
Gohir.D08G157300 Gossypium hirsutum HOM05D008230 ORTHO05D010279 4.1e-08 62.0 137 32.8
Medtr4g026350 Medicago truncatula HOM05D008230 ORTHO05D010279 4.1e-08 62.0 141 33.3
PGR004G0323 Punica granatum HOM05D008230 ORTHO05D010279 4.1e-08 62.0 53 54.7
Gohir.A08G136500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 5.4e-08 61.6 137 32.1
Cpa.g.sc49.161 Carica papaya HOM05D008230 ORTHO05D010279 7.0e-08 61.2 148 31.8
TWI23G1099 Tripterygium wilfordii HOM05D015292 ORTHO05D017778 9.1e-08 60.8 139 32.4
Gorai.004G163600 Gossypium raimondii HOM05D008230 ORTHO05D010279 2.7e-07 59.3 137 32.1
TPR.G27888 Trifolium pratense HOM05D016610 ORTHO05D017811 2.7e-07 59.3 129 34.9
Actinidia12189 Actinidia chinensis HOM05D008230 ORTHO05D010279 3.5e-07 58.9 142 31.0
CANSAT56G2525 Cannabis sativa HOM05D008230 ORTHO05D010279 1.0e-06 57.4 149 32.2
Gohir.D12G097250 Gossypium hirsutum HOM05D008230 ORTHO05D010279 1.0e-06 57.4 142 35.9
Gorai.008G105900 Gossypium raimondii HOM05D008230 ORTHO05D010279 1.0e-06 57.4 142 35.9
Eucgr.D02490 Eucalyptus grandis HOM05D008230 ORTHO05D010279 5.0e-06 55.1 131 35.1
Oeu045805.1 Olea europaea HOM05D043472 ORTHO05D010279 5.0e-06 55.1 146 32.9
Oeu045807.1 Olea europaea HOM05D043472 ORTHO05D010279 5.0e-06 55.1 146 32.9
FAN06G0210 Fragaria x ananassa HOM05D008230 ORTHO05D010279 6.6e-06 54.7 165 32.1
FvH4_7g11140 Fragaria vesca HOM05D008230 ORTHO05D010279 8.6e-06 54.3 165 32.1
Hma1.2p1_0432F.1_g151700 Hydrangea macrophylla HOM05D016610 ORTHO05D017811 8.6e-06 54.3 45 57.8


User provided reference genes

Program Settings