Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 7.0e-303 1043.1 510 100.0
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 5.3e-210 734.6 513 72.9
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 2.6e-196 689.1 514 69.3
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.7e-195 686.4 523 68.3
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 2.4e-194 682.6 533 66.8
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 1.3e-192 676.8 510 68.0
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 1.4e-189 666.8 514 66.1
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 1.7e-187 659.8 437 73.7
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 3.1e-186 655.6 510 66.3
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 7.7e-185 651.0 535 62.6
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 4.2e-183 645.2 432 72.5
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 3.6e-182 642.1 521 63.1
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 6.1e-182 641.3 528 63.3
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 1.0e-181 640.6 519 64.7
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 2.3e-181 639.4 440 73.4
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 1.5e-180 636.7 385 79.5
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 3.3e-180 635.6 452 72.6
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 3.3e-180 635.6 524 64.5
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 5.7e-180 634.8 486 66.0
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 5.7e-180 634.8 513 64.5
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 9.7e-180 634.0 514 65.6
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 1.3e-179 633.6 525 62.7
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 6.3e-179 631.3 441 69.8
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.8e-178 629.8 452 69.9
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 2.0e-177 626.3 447 69.6
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 2.7e-177 625.9 452 69.5
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 5.9e-177 624.8 507 63.9
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 1.3e-176 623.6 523 63.1
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 2.2e-176 622.9 461 67.2
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 2.5e-175 619.4 432 71.3
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 2.1e-174 616.3 514 62.5
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 2.7e-174 615.9 522 62.1
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 3.6e-174 615.5 520 62.7
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 4.7e-174 615.1 520 61.7
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 4.7e-174 615.1 462 69.3
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 4.7e-174 615.1 557 58.7
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 2.3e-173 612.8 521 62.2
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 8.8e-173 610.9 514 61.9
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 1.2e-172 610.5 448 68.3
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 1.5e-172 610.1 549 59.6
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 5.7e-172 608.2 515 61.9
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 9.8e-172 607.4 389 74.8
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 6.3e-171 604.7 552 58.2
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 6.3e-171 604.7 508 62.8
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 2.4e-170 602.8 462 66.9
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 3.1e-170 602.4 464 65.7
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 9.1e-170 600.9 477 63.9
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.2e-169 600.5 463 66.5
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.6e-169 600.1 465 67.3
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 1.6e-169 600.1 469 65.5
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.7e-169 599.4 436 69.5
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 2.7e-169 599.4 464 65.1
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 3.5e-169 599.0 450 66.0
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 7.7e-169 597.8 465 67.1
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.3e-168 597.0 461 67.5
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 1.7e-168 596.7 465 67.3
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 1.7e-168 596.7 463 67.6
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.9e-168 595.9 461 67.5
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 3.8e-168 595.5 451 67.4
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 8.6e-168 594.3 496 62.1
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 2.5e-167 592.8 465 65.4
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 1.2e-166 590.5 521 61.0
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 3.6e-166 589.0 521 60.7
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 8.0e-166 587.8 437 66.6
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.4e-165 587.0 461 66.4
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 5.7e-164 581.6 521 61.0
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 7.5e-164 581.3 519 60.3
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 3.7e-163 578.9 508 60.0
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 4.9e-163 578.6 447 64.9
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 8.3e-163 577.8 514 60.9
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 1.1e-162 577.4 509 59.9
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 3.1e-162 575.9 511 60.7
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 4.1e-162 575.5 508 59.6
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 4.1e-162 575.5 508 59.6
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 5.4e-162 575.1 514 59.5
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.2e-161 573.9 372 73.1
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 1.6e-161 573.5 517 58.6
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 4.5e-161 572.0 521 59.7
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 1.3e-160 570.5 509 59.7
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 1.7e-160 570.1 514 59.9
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 3.8e-160 568.9 533 55.7
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 2.8e-158 562.8 445 64.0
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 6.1e-158 561.6 460 63.0
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 4.0e-157 558.9 552 55.3
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 4.4e-156 555.4 418 67.9
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 2.2e-155 553.1 521 58.5
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 2.9e-155 552.7 447 61.5
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 1.6e-153 547.0 457 60.6
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 3.5e-153 545.8 463 62.9
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.2e-150 537.3 516 56.2
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 2.1e-150 536.6 462 61.3
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 4.4e-148 528.9 478 58.8
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 7.5e-148 528.1 457 61.5
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 4.1e-146 522.3 654 46.3
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 8.1e-142 508.1 385 66.0
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 5.1e-120 435.6 332 63.3
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 1.6e-118 430.6 252 79.8
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 2.5e-95 353.6 241 70.1
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 4.2e-90 336.3 192 80.2
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 5.7e-87 325.9 323 55.7
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 7.2e-82 308.9 319 53.6
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 1.0e-80 305.1 183 77.6
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 1.4e-80 304.7 484 36.6
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 8.8e-80 302.0 318 53.8
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 2.6e-79 300.4 325 53.5
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.3e-70 271.6 222 56.3
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 7.0e-69 265.8 163 74.8
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 3.1e-61 240.4 659 29.9
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 7.0e-61 239.2 652 29.0
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 1.8e-53 214.5 258 48.8
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 1.8e-53 214.5 447 31.3
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 7.3e-42 176.0 144 66.0
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 8.3e-38 162.5 362 30.4
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.4e-37 161.8 207 48.3
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 7.3e-26 122.9 107 56.1
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 4.0e-24 117.1 109 53.2
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 5.8e-23 113.2 61 80.3
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 3.9e-19 100.5 58 77.6
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 4.3e-18 97.1 161 39.1
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 6.8e-16 89.7 72 65.3
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 1.9e-13 81.6 153 32.7
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 3.5e-12 77.4 279 26.2
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 1.9e-10 71.6 42 71.4
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 2.1e-09 68.2 45 68.9
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 9.0e-08 62.8 77 46.8
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 9.9e-07 59.3 81 37.0
BcaC02g11397 Brassica carinata HOM05D006344 ORTHO05D007744 6.4e-06 56.6 40 67.5


User provided reference genes

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