Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 6.3e-157 557.4 276 100.0
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.3e-148 527.7 276 94.6
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 4.5e-115 418.3 275 72.0
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 1.0e-114 417.2 276 71.7
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 4.0e-111 405.2 276 66.7
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 6.8e-111 404.4 276 67.4
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 7.5e-110 401.0 276 69.6
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 9.8e-110 400.6 276 68.5
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 1.7e-109 399.8 276 68.8
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 6.4e-109 397.9 276 68.1
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 8.3e-109 397.5 276 65.2
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 8.3e-109 397.5 276 68.1
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.1e-108 397.1 276 65.2
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 1.8e-108 396.4 277 69.3
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 1.8e-108 396.4 276 67.4
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 3.2e-108 395.6 276 69.6
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 5.4e-108 394.8 276 67.4
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 7.0e-108 394.4 277 69.0
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 9.2e-108 394.0 276 67.0
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.2e-107 393.7 276 65.2
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.7e-107 392.5 276 64.5
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 1.0e-106 390.6 276 68.5
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 1.0e-106 390.6 278 68.7
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 1.3e-106 390.2 276 68.1
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 3.0e-106 389.0 278 68.3
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 3.0e-106 389.0 276 65.2
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 5.0e-106 388.3 276 65.9
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 6.6e-106 387.9 276 68.1
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 8.6e-106 387.5 276 67.4
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 1.1e-105 387.1 276 68.8
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 1.9e-105 386.3 278 67.6
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 2.5e-105 386.0 276 67.4
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 2.5e-105 386.0 276 68.8
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 4.3e-105 385.2 276 65.2
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 5.6e-105 384.8 276 65.2
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 2.1e-104 382.9 276 66.7
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 2.8e-104 382.5 276 65.2
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 3.6e-104 382.1 276 64.9
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 3.6e-104 382.1 276 64.9
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 8.0e-104 380.9 276 64.5
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 1.4e-103 380.2 276 65.6
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 2.3e-103 379.4 276 64.5
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 3.1e-103 379.0 276 65.6
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 5.2e-103 378.3 276 64.1
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 1.5e-102 376.7 276 65.6
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.5e-102 376.7 276 64.1
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 2.0e-102 376.3 276 64.5
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 3.4e-102 375.6 276 64.9
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 5.8e-102 374.8 276 65.6
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 7.5e-102 374.4 276 63.0
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 1.3e-101 373.6 276 65.2
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.3e-101 373.6 276 64.9
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.3e-101 373.6 276 64.9
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 1.3e-101 373.6 276 64.1
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 2.9e-101 372.5 276 65.6
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 8.3e-101 370.9 276 63.8
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 2.4e-100 369.4 276 64.1
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 2.4e-100 369.4 275 63.3
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 5.4e-100 368.2 276 63.4
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 5.4e-100 368.2 276 64.1
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 9.2e-100 367.5 276 63.0
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.6e-99 366.7 276 64.1
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 3.5e-99 365.5 276 64.1
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 4.6e-99 365.2 276 63.8
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 1.3e-98 363.6 276 64.1
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.5e-97 360.1 249 75.1
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 4.3e-97 358.6 276 62.0
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 1.2e-96 357.1 276 60.1
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 8.1e-96 354.4 276 60.9
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 1.4e-95 353.6 276 62.3
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 4.0e-95 352.1 247 67.6
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 6.8e-95 351.3 275 61.5
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 1.7e-93 346.7 277 60.3
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 6.4e-93 344.7 276 59.8
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 6.4e-93 344.7 279 60.9
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 7.1e-92 341.3 276 60.1
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 7.1e-92 341.3 276 60.1
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 4.6e-91 338.6 276 60.5
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 7.8e-91 337.8 277 60.3
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 1.3e-90 337.0 277 60.3
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 2.3e-90 336.3 280 58.9
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 2.3e-90 336.3 281 55.9
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 3.0e-90 335.9 281 56.9
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 3.3e-89 332.4 267 59.9
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 4.3e-89 332.0 285 57.5
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 3.6e-88 328.9 276 56.5
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 1.1e-87 327.4 273 58.2
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 4.0e-87 325.5 277 56.0
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 1.6e-83 313.5 277 55.6
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 1.7e-82 310.1 277 54.2
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 5.1e-82 308.5 276 55.8
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 1.9e-81 306.6 193 75.6
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.1e-80 303.1 255 56.9
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 8.1e-80 301.2 276 55.1
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 1.3e-77 293.9 246 56.1
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.9e-76 290.0 163 88.3
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 2.1e-75 286.6 277 51.3
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 1.1e-71 274.2 240 56.7
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 4.5e-70 268.9 194 65.5
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 2.9e-69 266.2 278 45.3
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.4e-68 263.8 242 55.0
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 8.7e-66 254.6 135 90.4
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 2.5e-65 253.1 281 44.1
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 1.6e-64 250.4 288 44.1
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.4e-63 246.5 163 66.9
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 1.3e-56 224.2 137 78.1
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 1.5e-54 217.2 234 47.9
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 1.1e-52 211.1 200 56.5
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 9.3e-52 208.0 265 46.0
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 2.2e-48 196.8 149 63.1
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 3.6e-43 179.5 110 74.5
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 5.1e-42 175.6 142 63.4
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 2.4e-39 166.8 349 31.2
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 3.4e-38 162.9 170 48.2
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 2.5e-36 156.8 232 38.4
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 9.4e-36 154.8 93 75.3
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.8e-32 143.3 78 94.9
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 1.3e-29 134.4 93 72.0
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 2.7e-27 126.7 301 31.9
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 2.0e-22 110.5 198 34.8
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 2.6e-22 110.2 286 29.7
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 2.6e-22 110.2 224 33.5
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 4.5e-22 109.4 252 29.8
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 1.1e-20 104.8 86 54.7
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 4.1e-15 86.3 85 50.6
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 2.7e-14 83.6 54 70.4
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 8.5e-13 78.6 61 62.3


User provided reference genes

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