Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00573 Nelumbo nucifera HOM05D007618 ORTHO05D009606 9.6e-71 270.0 132 100.0
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 4.0e-45 184.9 138 72.5
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 6.5e-43 177.6 138 68.1
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 1.4e-42 176.4 138 65.9
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 1.4e-42 176.4 138 67.4
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 1.9e-42 176.0 138 66.7
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 1.9e-42 176.0 138 65.9
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 2.5e-42 175.6 138 65.9
QL11p055571 Quercus lobata HOM05D007618 ORTHO05D009606 3.2e-42 175.3 138 65.2
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 4.2e-42 174.9 138 65.9
Eucgr.I01514 Eucalyptus grandis HOM05D007618 ORTHO05D009606 1.2e-41 173.3 137 66.4
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 1.2e-41 173.3 138 66.7
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 2.1e-41 172.6 138 65.2
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 2.1e-41 172.6 138 65.9
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 7.9e-41 170.6 138 65.2
PGR142G1310 Punica granatum HOM05D007618 ORTHO05D009606 1.0e-40 170.2 138 63.0
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 3.9e-40 168.3 138 65.9
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 5.1e-40 167.9 138 63.8
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 5.1e-40 167.9 138 65.2
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 8.7e-40 167.2 138 65.2
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 8.7e-40 167.2 138 63.8
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 8.7e-40 167.2 138 63.8
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 2.5e-39 165.6 138 65.2
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 2.5e-39 165.6 138 62.3
VMungo1309G2136 Vigna mungo HOM05D007618 ORTHO05D009606 2.5e-39 165.6 138 63.0
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 3.3e-39 165.2 138 62.3
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 7.4e-39 164.1 127 64.6
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 7.4e-39 164.1 138 62.3
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 7.4e-39 164.1 127 64.6
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 9.7e-39 163.7 138 63.0
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 2.2e-38 162.5 138 62.3
Actinidia20565 Actinidia chinensis HOM05D007618 ORTHO05D009606 3.7e-38 161.8 143 59.4
HanXRQChr14g0459071 Helianthus annuus HOM05D007618 ORTHO05D009606 3.7e-38 161.8 138 61.6
PSO541G4833 Papaver somniferum HOM05D007618 ORTHO05D009606 6.3e-38 161.0 138 62.3
vmacro02327 Vaccinium macrocarpon HOM05D007618 ORTHO05D009606 6.3e-38 161.0 123 68.3
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 8.2e-38 160.6 138 62.3
Cc09_g10690 Coffea canephora HOM05D007618 ORTHO05D009606 1.1e-37 160.2 138 60.1
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 1.1e-37 160.2 138 61.6
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 1.1e-37 160.2 138 61.6
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 1.1e-37 160.2 138 60.9
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 1.8e-37 159.5 138 61.6
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 1.8e-37 159.5 138 61.6
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 2.4e-37 159.1 138 60.1
Lsat_1_v5_gn_8_120421 Lactuca sativa HOM05D007618 ORTHO05D009606 5.3e-37 157.9 138 60.9
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 5.3e-37 157.9 138 60.9
Gohir.D10G000400 Gossypium hirsutum HOM05D007618 ORTHO05D009606 6.9e-37 157.5 138 60.9
Gorai.011G000800 Gossypium raimondii HOM05D002478 ORTHO05D003331 6.9e-37 157.5 138 60.9
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 6.9e-37 157.5 138 60.1
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 9.0e-37 157.1 138 59.4
PSO675G2292 Papaver somniferum HOM05D007618 ORTHO05D009606 1.5e-36 156.4 138 60.9
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 7.6e-36 154.1 127 61.4
Sc18g0005980 Simmondsia chinensis HOM05D007618 ORTHO05D009606 1.0e-35 153.7 137 59.9
arahy.Tifrunner.gnm1.ann1.U2J3P2 Arachis hypogaea HOM05D007618 ORTHO05D009606 1.3e-35 153.3 127 61.4
arahy.Tifrunner.gnm1.ann1.ZSY7EJ Arachis hypogaea HOM05D007618 ORTHO05D009606 1.3e-35 153.3 136 58.8
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 1.3e-35 153.3 137 58.4
SGA_v2.0_scaffold32G13341 Striga asiatica HOM05D007618 ORTHO05D009606 1.3e-35 153.3 138 59.4
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 8.5e-35 150.6 138 60.1
Peaxi162Scf00362g00251 Petunia axillaris HOM05D007618 ORTHO05D009606 8.5e-35 150.6 138 60.9
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 1.1e-34 150.2 136 57.4
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 1.1e-34 150.2 138 55.8
Migut.B00014 Erythranthe guttata HOM05D007618 ORTHO05D009606 1.4e-34 149.8 138 58.0
Nitab4.5_0011212g0030 Nicotiana tabacum HOM05D007618 ORTHO05D009606 1.9e-34 149.4 138 60.1
AUR62011704 Chenopodium quinoa HOM05D007618 ORTHO05D009606 5.5e-34 147.9 144 56.2
Atru.chr5.3531 Acer truncatum HOM05D007618 ORTHO05D009606 3.6e-33 145.2 92 75.0
Glyma.04G001200 Glycine max HOM05D007618 ORTHO05D009606 6.1e-33 144.4 91 75.8
Gohir.A10G000200 Gossypium hirsutum HOM05D002478 ORTHO05D003331 1.0e-32 143.7 159 52.2
CDE05G0820 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 1.8e-32 142.9 138 55.8
arahy.Tifrunner.gnm1.ann1.DQ7S7B Arachis hypogaea HOM05D007618 ORTHO05D009606 8.7e-32 140.6 91 72.5
Zm00001eb002550 Zea mays HOM05D007618 ORTHO05D009606 2.5e-31 139.0 138 52.9
HPP92_022157 Vanilla planifolia HOM05D007618 ORTHO05D009606 1.7e-30 136.3 139 55.4
Rhsim11G0196900 Rhododendron simsii HOM05D007618 ORTHO05D009606 8.2e-30 134.0 116 62.1
ECA233G1377 Erigeron canadensis HOM05D007618 ORTHO05D009606 2.0e-28 129.4 115 62.6
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 1.1e-26 123.6 142 52.1
DCAR_022841 Daucus carota HOM05D007618 ORTHO05D009606 6.1e-25 117.9 137 51.1
arahy.Tifrunner.gnm1.ann1.0TM8HZ Arachis hypogaea HOM05D007618 ORTHO05D009606 2.4e-21 105.9 63 76.2
Pp3c3_10700 Physcomitrium patens HOM05D007618 ORTHO05D009606 7.7e-20 100.9 128 41.4
Nn5g30826 Nelumbo nucifera HOM05D007618 ORTHO05D009606 2.5e-18 95.9 63 77.8
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 4.2e-18 95.1 138 39.1
TPR.G29338 Trifolium pratense HOM05D007618 ORTHO05D009606 4.2e-18 95.1 98 54.1
SEGI_37348 Sequoiadendron giganteum HOM05D007618 ORTHO05D009606 1.6e-17 93.2 127 44.1
Psat5g000560 Pisum sativum HOM05D007618 ORTHO05D009606 5.0e-11 71.6 42 76.2
TPR.G38509 Trifolium pratense HOM05D007618 ORTHO05D009606 1.1e-10 70.5 41 75.6
Psat5g000680 Pisum sativum HOM05D007618 ORTHO05D009606 2.3e-08 62.8 109 38.5
Cc03_g12640 Coffea canephora HOM05D007618 ORTHO05D009606 1.2e-07 60.5 66 50.0
Actinidia18005 Actinidia chinensis HOM05D007618 ORTHO05D009606 2.6e-07 59.3 96 40.6
PGSC0003DMG401014675 Solanum tuberosum HOM05D007618 ORTHO05D009606 2.8e-06 55.8 86 39.5
SMO367G1105 Selaginella moellendorffii HOM05D007618 ORTHO05D009606 3.7e-06 55.5 79 41.8


User provided reference genes

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