Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00490 Nelumbo nucifera HOM05D001765 ORTHO05D003527 5.1e-27 123.6 61 100.0
Nn1g00491 Nelumbo nucifera HOM05D001765 ORTHO05D003527 5.1e-27 123.6 61 100.0
TAR375G0793 Trochodendron aralioides HOM05D001765 ORTHO05D003527 1.3e-17 92.4 61 75.4
CiPaw.11G106600 Carya illinoinensis HOM05D001765 ORTHO05D003527 1.4e-16 89.0 57 75.4
Haze_03593 Corylus avellana HOM05D001765 ORTHO05D003527 5.3e-16 87.0 57 71.9
Aqoxy5G04386 Aquilegia oxysepala HOM05D001765 ORTHO05D003527 6.9e-16 86.7 61 73.8
Dinv12396 Davidia involucrata HOM05D001765 ORTHO05D003527 2.6e-15 84.7 61 68.9
Cfa010658 Carpinus fangiana HOM05D001765 ORTHO05D003527 3.4e-15 84.3 57 70.2
CSS0000240 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D003527 5.9e-15 83.6 57 71.9
Thecc.03G214000 Theobroma cacao HOM05D001765 ORTHO05D003527 7.7e-15 83.2 57 71.9
Nitab4.5_0006317g0030 Nicotiana tabacum HOM05D001765 ORTHO05D003527 5.0e-14 80.5 54 66.7
Duzib084G1229 Durio zibethinus HOM05D001765 ORTHO05D003527 6.5e-14 80.1 57 70.2
Hma1.2p1_0436F.1_g152890 Hydrangea macrophylla HOM05D001765 ORTHO05D003527 1.9e-13 78.6 59 62.7
GSVIVG01019710001 Vitis vinifera HOM05D001765 ORTHO05D003527 3.2e-13 77.8 57 68.4
Nitab4.5_0000450g0050 Nicotiana tabacum HOM05D001765 ORTHO05D003527 4.2e-13 77.4 54 64.8
QL02p026712 Quercus lobata HOM05D001765 ORTHO05D003527 4.2e-13 77.4 57 63.2
QL93p2012_0004 Quercus lobata HOM05D001765 ORTHO05D003527 4.2e-13 77.4 57 63.2
QL93p2012_0027 Quercus lobata HOM05D001765 ORTHO05D003527 4.2e-13 77.4 57 63.2
Actinidia22239 Actinidia chinensis HOM05D001765 ORTHO05D003527 7.2e-13 76.6 57 68.4
TWI60G1724 Tripterygium wilfordii HOM05D001765 ORTHO05D003527 9.4e-13 76.3 59 64.4
Duzib068G1454 Durio zibethinus HOM05D001765 ORTHO05D003527 2.1e-12 75.1 57 66.7
Cpa.g.sc37.116 Carica papaya HOM05D001765 ORTHO05D003527 4.6e-12 73.9 55 67.3
Eucgr.D02536 Eucalyptus grandis HOM05D001765 ORTHO05D003527 4.6e-12 73.9 52 71.2
Manes.01G000550 Manihot esculenta HOM05D001765 ORTHO05D003527 4.6e-12 73.9 61 62.3
Lj2A148G64 Lonicera japonica HOM05D001765 ORTHO05D003527 6.1e-12 73.6 61 59.0
Ciclev10022684m.g Citrus clementina HOM05D001765 ORTHO05D003527 1.0e-11 72.8 56 66.1
FvH4_5g10193 Fragaria vesca HOM05D001765 ORTHO05D003527 1.4e-11 72.4 60 61.7
Cc08_g05160 Coffea canephora HOM05D001765 ORTHO05D003527 1.8e-11 72.0 60 56.7
MD06G1126400 Malus domestica HOM05D001765 ORTHO05D003527 3.0e-11 71.2 61 59.0
vmacro11471 Vaccinium macrocarpon HOM05D001765 ORTHO05D003527 3.9e-11 70.9 57 59.6
Gohir.D12G244600 Gossypium hirsutum HOM05D001765 ORTHO05D003527 5.1e-11 70.5 58 65.5
Gorai.008G262200 Gossypium raimondii HOM05D001765 ORTHO05D003527 5.1e-11 70.5 58 65.5
CANSAT21G2548 Cannabis sativa HOM05D001765 ORTHO05D003527 6.7e-11 70.1 57 61.4
FAN13G1501 Fragaria x ananassa HOM05D000258 ORTHO05D000153 6.7e-11 70.1 60 60.0
Oeu020469.1 Olea europaea HOM05D001765 ORTHO05D003527 6.7e-11 70.1 58 62.1
SGA_v2.0_scaffold20G09260 Striga asiatica HOM05D001765 ORTHO05D003527 6.7e-11 70.1 61 59.0
PGR031G0625 Punica granatum HOM05D001765 ORTHO05D003527 8.8e-11 69.7 55 63.6
FAN18G1217 Fragaria x ananassa HOM05D001765 ORTHO05D003527 1.1e-10 69.3 60 60.0
Atru.chr9.1818 Acer truncatum HOM05D001765 ORTHO05D003527 2.6e-10 68.2 55 63.6
Prupe.5G136900 Prunus persica HOM05D001765 ORTHO05D003527 2.6e-10 68.2 61 55.7
RcHm_v2.0_Chr7g0188041 Rosa chinensis HOM05D001765 ORTHO05D003527 2.6e-10 68.2 60 58.3
FAN04G1154 Fragaria x ananassa HOM05D000258 ORTHO05D000153 5.7e-10 67.0 54 61.1
COL.COLO4_10860 Corchorus olitorius HOM05D001765 ORTHO05D003527 9.7e-10 66.2 60 61.7
MSTRG.2000 Avicennia marina HOM05D001765 ORTHO05D003527 1.7e-09 65.5 50 62.0
Gohir.A12G243600 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.8e-09 64.7 58 62.1
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 6.3e-09 63.5 52 61.5
Potri.001G453400 Populus trichocarpa HOM05D001765 ORTHO05D003527 1.1e-08 62.8 57 64.9
Migut.E00773 Erythranthe guttata HOM05D001765 ORTHO05D003527 1.4e-08 62.4 58 58.6
Sabra16G0306500 Salix brachista HOM05D001765 ORTHO05D003527 1.4e-08 62.4 57 64.9
PSO063G6238 Papaver somniferum HOM05D001765 ORTHO05D003527 3.1e-08 61.2 55 52.7
PSO782G3477 Papaver somniferum HOM05D001765 ORTHO05D003527 6.9e-08 60.1 55 50.9
Peaxi162Scf00779g00211 Petunia axillaris HOM05D001765 ORTHO05D003527 2.0e-07 58.5 57 56.1
Sed0027749 Sechium edule HOM05D001765 ORTHO05D003527 2.0e-07 58.5 50 56.0
Hund00380 Selenicereus undatus HOM05D001765 ORTHO05D003527 2.6e-07 58.2 57 54.4
CDE11G1166 Ceratophyllum demersum HOM05D001765 ORTHO05D003527 3.4e-07 57.8 57 57.9
CDE09G1369 Ceratophyllum demersum HOM05D001765 ORTHO05D003527 4.5e-07 57.4 57 57.9
THA.LOC104823621 Tarenaya hassleriana HOM05D001765 ORTHO05D003527 4.5e-07 57.4 61 52.5
AT1G73940 Arabidopsis thaliana HOM05D001765 ORTHO05D003527 7.7e-07 56.6 55 54.5
Carub.0002s2071 Capsella rubella HOM05D001765 ORTHO05D003527 7.7e-07 56.6 54 53.7
HPP92_020738 Vanilla planifolia HOM05D001765 ORTHO05D003527 7.7e-07 56.6 57 56.1
EL10Ac9g22070 Beta vulgaris HOM05D001765 ORTHO05D003527 1.0e-06 56.2 61 49.2
unitig_52.g17201 Utricularia gibba HOM05D000742 ORTHO05D000924 1.7e-06 55.5 63 47.6
C06p48050 Brassica napus HOM05D001765 ORTHO05D003527 2.2e-06 55.1 55 54.5
BolC6t39840H Brassica oleracea HOM05D001765 ORTHO05D003527 2.2e-06 55.1 55 54.5
CsaV3_5G001370 Cucumis sativus L. HOM05D001765 ORTHO05D003527 2.2e-06 55.1 57 50.9
Aa31LG4G4230 Aethionema arabicum HOM05D001765 ORTHO05D003527 3.8e-06 54.3 32 75.0
Thhalv10019277m.g Eutrema salsugineum HOM05D001765 ORTHO05D003527 3.8e-06 54.3 44 59.1
BcaB03g15737 Brassica carinata HOM05D001765 ORTHO05D003527 5.0e-06 53.9 32 75.0
C06p33710 Brassica napus HOM05D001765 ORTHO05D003527 5.0e-06 53.9 32 75.0
AL2G33770 Arabidopsis lyrata HOM05D001765 ORTHO05D003527 6.5e-06 53.5 55 50.9
CARHR067050 Cardamine hirsuta HOM05D001765 ORTHO05D003527 8.5e-06 53.1 55 49.1
Sp5g29140 Schrenkiella parvula HOM05D001765 ORTHO05D003527 8.5e-06 53.1 55 50.9
Sed0026089 Sechium edule HOM05D001765 ORTHO05D003527 8.5e-06 53.1 50 52.0


User provided reference genes

Program Settings