Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.7e-154 549.3 276 100.0
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.0e-114 417.2 279 77.4
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 8.3e-109 397.5 279 75.3
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 1.3e-106 390.2 282 73.4
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 1.7e-106 389.8 279 73.8
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 8.6e-106 387.5 276 73.2
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 1.5e-105 386.7 277 73.6
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 2.5e-105 386.0 279 73.5
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 3.3e-105 385.6 279 72.4
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 3.3e-105 385.6 281 71.2
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 3.3e-105 385.6 279 73.1
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 4.3e-105 385.2 279 72.8
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 7.3e-105 384.4 279 72.0
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 9.5e-105 384.0 281 71.9
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.6e-104 383.3 279 73.5
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.8e-104 382.5 279 71.7
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 3.6e-104 382.1 280 71.1
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 3.6e-104 382.1 276 72.5
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 6.2e-104 381.3 306 68.0
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 1.1e-103 380.6 283 71.4
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 2.3e-103 379.4 280 71.8
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 3.1e-103 379.0 280 69.6
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 4.0e-103 378.6 305 67.2
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 4.0e-103 378.6 287 71.4
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 4.0e-103 378.6 285 72.6
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 6.8e-103 377.9 277 72.6
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 6.8e-103 377.9 280 71.4
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.2e-102 377.1 286 69.6
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.6e-102 375.9 279 69.9
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 4.4e-102 375.2 280 70.0
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 4.4e-102 375.2 279 70.6
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 4.4e-102 375.2 281 71.9
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 5.8e-102 374.8 279 70.6
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 9.8e-102 374.0 282 69.1
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 1.3e-101 373.6 278 71.2
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 2.2e-101 372.9 281 71.5
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.9e-101 372.5 282 69.1
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 2.9e-101 372.5 281 70.5
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 3.7e-101 372.1 282 70.9
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 4.9e-101 371.7 278 69.8
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 6.4e-101 371.3 280 69.6
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.1e-100 370.5 284 70.4
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 2.4e-100 369.4 280 71.4
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 4.1e-100 368.6 277 69.0
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.6e-99 366.7 280 67.9
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.6e-99 366.7 282 67.4
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.6e-99 366.7 281 69.8
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.0e-99 366.3 284 68.7
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 2.0e-99 366.3 280 68.6
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 2.0e-99 366.3 286 68.5
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 3.5e-99 365.5 279 70.3
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 4.6e-99 365.2 267 74.5
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 7.8e-99 364.4 277 71.5
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.0e-98 364.0 233 79.8
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.7e-98 363.2 279 71.0
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 6.6e-98 361.3 276 69.2
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 8.6e-98 360.9 277 68.6
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 4.3e-97 358.6 276 67.4
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 7.3e-97 357.8 278 68.7
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 9.5e-97 357.5 280 67.5
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 1.6e-96 356.7 279 67.7
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 1.6e-96 356.7 279 67.7
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.6e-96 356.7 279 67.0
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 2.8e-96 355.9 277 66.8
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 4.7e-96 355.1 279 69.5
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 4.7e-96 355.1 283 66.1
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 4.7e-96 355.1 289 66.8
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 6.2e-96 354.8 278 66.9
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 6.2e-96 354.8 272 71.3
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 1.4e-95 353.6 229 76.0
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 1.4e-95 353.6 229 76.0
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 2.3e-95 352.8 277 65.7
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 4.0e-95 352.1 205 82.9
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 6.8e-95 351.3 277 67.1
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 3.4e-94 349.0 306 62.7
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.3e-93 347.1 253 70.4
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.9e-93 345.9 234 74.8
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 3.7e-93 345.5 205 81.0
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.1e-92 344.0 219 79.0
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 2.4e-92 342.8 205 82.4
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.4e-92 341.7 266 66.9
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.4e-92 341.7 205 80.5
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 5.4e-92 341.7 231 73.2
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 7.1e-92 341.3 205 82.0
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 1.2e-91 340.5 276 64.1
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 1.2e-91 340.5 227 74.9
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.6e-91 340.1 205 81.0
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 7.8e-91 337.8 283 64.7
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.0e-90 337.4 211 82.0
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.7e-90 336.7 312 60.3
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 2.3e-90 336.3 279 65.6
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 2.3e-90 336.3 276 67.4
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 5.1e-90 335.1 260 66.5
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.5e-89 333.6 278 62.9
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.6e-88 330.1 218 76.1
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 8.1e-88 327.8 204 78.4
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 3.1e-87 325.9 203 79.3
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 8.7e-82 307.8 180 86.1
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 2.1e-80 303.1 226 69.0
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 6.2e-80 301.6 276 60.5
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 6.2e-80 301.6 203 73.4
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 5.8e-78 295.0 224 69.2
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 2.2e-69 266.5 202 66.3
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.2e-68 262.7 283 55.8
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 5.4e-68 261.9 217 64.1
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.8e-66 256.9 284 56.3
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 3.0e-66 256.1 188 71.8
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 5.1e-66 255.4 226 57.1
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.3e-64 250.8 159 80.5
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.6e-62 243.0 243 58.8
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 5.8e-62 241.9 204 60.8
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 3.8e-61 239.2 160 75.6
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.1e-60 237.7 223 57.4
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.9e-60 236.9 239 50.6
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 3.7e-56 222.6 225 50.2
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.2e-53 213.4 116 87.1
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.5e-46 190.7 114 80.7
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 1.5e-41 174.1 175 55.4
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.4e-39 167.5 189 51.3
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.9e-26 122.9 112 57.1
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.4e-25 119.4 116 56.0
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 8.8e-10 68.6 63 58.7
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 5.7e-09 65.9 34 88.2


User provided reference genes

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