Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00276 Nelumbo nucifera HOM05D004576 ORTHO05D005321 1.1e-226 789.6 412 100.0
Dinv35342 Davidia involucrata HOM05D004576 ORTHO05D005321 6.4e-182 641.0 403 81.9
TAR633G0881 Trochodendron aralioides HOM05D004576 ORTHO05D005321 2.8e-177 625.5 400 81.8
CSS0008628 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 1.8e-176 622.9 404 79.7
GSVIVG01038559001 Vitis vinifera HOM05D004576 ORTHO05D005321 6.9e-176 620.9 404 80.0
TAR629G2734 Trochodendron aralioides HOM05D004576 ORTHO05D005321 3.8e-174 615.1 405 80.0
Prupe.2G309200 Prunus persica HOM05D004576 ORTHO05D005321 1.1e-173 613.6 404 77.2
Hund11655 Selenicereus undatus HOM05D004576 ORTHO05D005321 1.4e-173 613.2 403 76.7
Rhsim09G0206100 Rhododendron simsii HOM05D004576 ORTHO05D005321 2.7e-172 609.0 406 79.1
Gohir.A05G415000 Gossypium hirsutum HOM05D004576 ORTHO05D005321 2.3e-171 605.9 403 75.7
Gohir.D04G001200 Gossypium hirsutum HOM05D004576 ORTHO05D005321 3.9e-171 605.1 403 75.7
Gorai.012G002200 Gossypium raimondii HOM05D004576 ORTHO05D005321 3.9e-171 605.1 403 75.7
CiPaw.06G045600 Carya illinoinensis HOM05D004576 ORTHO05D005321 2.5e-170 602.4 399 78.4
CAN.G140.19 Capsicum annuum HOM05D004576 ORTHO05D005321 3.3e-170 602.1 405 76.5
COL.COLO4_16771 Corchorus olitorius HOM05D004576 ORTHO05D005321 9.6e-170 600.5 418 73.7
Nitab4.5_0003555g0040 Nicotiana tabacum HOM05D004576 ORTHO05D005321 1.3e-169 600.1 412 75.7
vmacro10126 Vaccinium macrocarpon HOM05D004576 ORTHO05D005321 1.6e-169 599.7 406 78.3
Thecc.03G200200 Theobroma cacao HOM05D004576 ORTHO05D005321 3.7e-169 598.6 403 75.7
Actinidia06144 Actinidia chinensis HOM05D004576 ORTHO05D005321 8.2e-169 597.4 398 78.1
arahy.Tifrunner.gnm1.ann1.EHU7FT Arachis hypogaea HOM05D004576 ORTHO05D005321 1.1e-168 597.0 406 77.1
arahy.Tifrunner.gnm1.ann1.S03LBS Arachis hypogaea HOM05D004576 ORTHO05D005321 1.1e-168 597.0 406 77.1
Duzib068G0175 Durio zibethinus HOM05D004576 ORTHO05D005321 1.1e-168 597.0 398 75.9
Hma1.2p1_1587F.1_g292290 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 2.4e-168 595.9 409 76.3
Aqoxy7G00528 Aquilegia oxysepala HOM05D004576 ORTHO05D005321 4.1e-168 595.1 405 75.8
Cpa.g.sc3.95 Carica papaya HOM05D004576 ORTHO05D005321 9.0e-168 594.0 410 76.3
Hma1.2p1_0404F.1_g145290 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 9.0e-168 594.0 409 76.0
Sopen01g002110 Solanum pennellii HOM05D004576 ORTHO05D005321 2.6e-167 592.4 407 75.7
Ca_16714_v3 Cicer arietinum L. HOM05D004576 ORTHO05D005321 3.4e-167 592.0 404 74.0
Hma1.2p1_1507F.1_g287630 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 4.5e-167 591.7 409 77.5
MD01G1217800 Malus domestica HOM05D004576 ORTHO05D005321 1.3e-166 590.1 407 74.9
Lalb_Chr11g0066931 Lupinus albus HOM05D004576 ORTHO05D005321 1.7e-166 589.7 404 75.0
Solyc01g006110.3 Solanum lycopersicum HOM05D004576 ORTHO05D005321 2.2e-166 589.3 407 75.2
Cc02_g01450 Coffea canephora HOM05D004576 ORTHO05D005321 5.0e-166 588.2 403 76.4
CAN.G575.13 Capsicum annuum HOM05D004576 ORTHO05D005321 6.5e-166 587.8 404 74.5
FAN06G0548 Fragaria x ananassa HOM05D004576 ORTHO05D005321 1.9e-165 586.3 409 73.8
RcHm_v2.0_Chr1g0380451 Rosa chinensis HOM05D004576 ORTHO05D005321 1.9e-165 586.3 409 73.8
FvH4_7g31380 Fragaria vesca HOM05D004576 ORTHO05D005321 3.2e-165 585.5 409 73.6
FAN06G1560 Fragaria x ananassa HOM05D004576 ORTHO05D005321 5.5e-165 584.7 409 73.8
PGSC0003DMG400032187 Solanum tuberosum HOM05D004576 ORTHO05D005321 5.5e-165 584.7 407 74.7
FAN01G2495 Fragaria x ananassa HOM05D004576 ORTHO05D005321 1.6e-164 583.2 409 73.3
EL10Ac3g05272 Beta vulgaris HOM05D004576 ORTHO05D005321 2.1e-164 582.8 403 73.7
Atru.chr12.2224 Acer truncatum HOM05D004576 ORTHO05D005321 4.6e-164 581.6 402 75.1
Ah.07g205540 Amaranthus hybridus HOM05D004576 ORTHO05D005321 1.0e-163 580.5 403 72.5
MD07G1287100 Malus domestica HOM05D004576 ORTHO05D005321 1.3e-163 580.1 407 73.7
MD07G1287400 Malus domestica HOM05D004576 ORTHO05D005321 1.3e-163 580.1 407 73.7
TWI39G0751 Tripterygium wilfordii HOM05D004576 ORTHO05D005321 1.8e-163 579.7 404 74.8
Phvul.009G051900 Phaseolus vulgaris HOM05D004576 ORTHO05D005321 3.0e-163 578.9 399 74.9
Sc25g0000910 Simmondsia chinensis HOM05D004576 ORTHO05D005321 1.5e-162 576.6 407 74.0
Cfa016237 Carpinus fangiana HOM05D004576 ORTHO05D005321 2.5e-162 575.9 402 74.4
Potri.012G016500 Populus trichocarpa HOM05D004576 ORTHO05D005321 3.3e-162 575.5 406 74.1
FAN03G3343 Fragaria x ananassa HOM05D004576 ORTHO05D005321 4.3e-162 575.1 409 72.6
Glyma.04G234900 Glycine max HOM05D004576 ORTHO05D005321 4.3e-162 575.1 399 73.7
PGR042G3016 Punica granatum HOM05D004576 ORTHO05D005321 5.7e-162 574.7 402 74.4
Haze_00204 Corylus avellana HOM05D004576 ORTHO05D005321 9.7e-162 573.9 408 73.0
CSS0016084 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 1.6e-161 573.2 404 75.2
CANSAT21G1766 Cannabis sativa HOM05D004576 ORTHO05D005321 1.6e-161 573.2 406 73.4
HPP92_010727 Vanilla planifolia HOM05D004576 ORTHO05D005321 1.6e-161 573.2 399 74.2
VMungo1309G0981 Vigna mungo HOM05D005525 ORTHO05D005321 2.2e-161 572.8 397 74.3
MBI06_g10867_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 3.7e-161 572.0 429 69.9
Manes.10G051900 Manihot esculenta HOM05D004576 ORTHO05D005321 4.8e-161 571.6 404 72.3
Eucgr.A01454 Eucalyptus grandis HOM05D004576 ORTHO05D005321 2.4e-160 569.3 404 72.5
Peaxi162Scf00441g00115 Petunia axillaris HOM05D004576 ORTHO05D005321 4.1e-160 568.5 402 73.1
Psat5g076560 Pisum sativum HOM05D004576 ORTHO05D005321 4.1e-160 568.5 404 72.0
SGA_v2.0_scaffold192G40533 Striga asiatica HOM05D004576 ORTHO05D005321 4.1e-160 568.5 402 74.1
Medtr3g091640 Medicago truncatula HOM05D004576 ORTHO05D005321 9.0e-160 567.4 405 72.6
AUR62019411 Chenopodium quinoa HOM05D004576 ORTHO05D005321 2.0e-159 566.2 403 71.5
PSO063G4456 Papaver somniferum HOM05D004576 ORTHO05D005321 2.2e-158 562.8 406 70.0
TPR.G18754 Trifolium pratense HOM05D004576 ORTHO05D005321 3.8e-158 562.0 389 73.5
HanXRQChr07g0206441 Helianthus annuus HOM05D004576 ORTHO05D005321 2.5e-157 559.3 410 71.0
MELO3C021489.2 Cucumis melo HOM05D004576 ORTHO05D005321 4.2e-157 558.5 401 72.1
Manes.07G095000 Manihot esculenta HOM05D004576 ORTHO05D005321 4.2e-157 558.5 405 71.1
Lj4g0015379 Lotus japonicus HOM05D004576 ORTHO05D005321 7.2e-157 557.8 401 72.1
CsaV3_5G037660 Cucumis sativus L. HOM05D004576 ORTHO05D005321 3.6e-156 555.4 401 71.1
ECA238G3082 Erigeron canadensis HOM05D004576 ORTHO05D005321 3.6e-156 555.4 406 71.2
ClCG09G018570 Citrullus lanatus HOM05D004576 ORTHO05D005321 1.4e-155 553.5 401 71.8
Nitab4.5_0005477g0060 Nicotiana tabacum HOM05D004576 ORTHO05D005321 8.8e-155 550.8 408 71.1
ATR0763G025 Amborella trichopoda HOM05D004576 ORTHO05D005321 2.5e-154 549.3 406 70.4
Ciclev10020388m.g Citrus clementina HOM05D004576 ORTHO05D005321 3.3e-154 548.9 411 69.8
Os12g0137500 Oryza sativa ssp. japonica HOM05D004576 ORTHO05D005321 5.7e-154 548.1 396 70.5
Oeu023658.2 Olea europaea HOM05D004576 ORTHO05D005321 2.2e-153 546.2 453 65.6
QL09p008710 Quercus lobata HOM05D004576 ORTHO05D005321 2.2e-153 546.2 439 66.5
MSTRG.27022 Avicennia marina HOM05D004576 ORTHO05D005321 3.7e-153 545.4 401 70.1
Migut.F00204 Erythranthe guttata HOM05D004576 ORTHO05D005321 4.8e-153 545.0 402 70.6
Oeu041059.3 Olea europaea HOM05D004576 ORTHO05D005321 4.8e-153 545.0 443 67.5
SalBow4G0465 Salvia bowleyana HOM05D004576 ORTHO05D005321 4.8e-153 545.0 448 64.5
DCAR_020325 Daucus carota HOM05D004576 ORTHO05D005321 1.4e-152 543.5 405 73.1
Gorai.008G268300 Gossypium raimondii HOM05D004576 ORTHO05D005321 1.8e-152 543.1 401 70.3
Potri.015G012200 Populus trichocarpa HOM05D004576 ORTHO05D005321 2.4e-152 542.7 402 71.4
Gohir.D12G250200 Gossypium hirsutum HOM05D004576 ORTHO05D005321 6.9e-152 541.2 401 70.1
PSO170G5996 Papaver somniferum HOM05D004576 ORTHO05D005321 1.5e-151 540.0 406 67.7
THA.LOC104799972 Tarenaya hassleriana HOM05D004576 ORTHO05D005321 2.0e-151 539.7 400 70.8
Sed0009575 Sechium edule HOM05D004576 ORTHO05D005321 4.5e-151 538.5 402 69.4
AUR62006083 Chenopodium quinoa HOM05D004576 ORTHO05D005321 2.2e-150 536.2 403 68.5
Zm00001eb093250 Zea mays HOM05D004576 ORTHO05D005321 2.9e-150 535.8 396 67.4
Thhalv10013705m.g Eutrema salsugineum HOM05D004576 ORTHO05D005321 1.9e-149 533.1 406 68.2
CARHR265990 Cardamine hirsuta HOM05D004576 ORTHO05D005321 5.5e-149 531.6 406 68.2
CDE02G4477 Ceratophyllum demersum HOM05D004576 ORTHO05D005321 5.5e-149 531.6 403 68.0
Aa31LG9G16760 Aethionema arabicum HOM05D004576 ORTHO05D005321 2.7e-148 529.3 402 67.4
Lsat_1_v5_gn_2_136141 Lactuca sativa HOM05D004576 ORTHO05D005321 6.1e-148 528.1 403 69.7
Sed0014456 Sechium edule HOM05D004576 ORTHO05D005321 6.1e-148 528.1 402 69.9
A10p10480 Brassica napus HOM05D004576 ORTHO05D005321 2.3e-147 526.2 408 67.9
C09p42710 Brassica napus HOM05D004576 ORTHO05D005321 5.1e-147 525.0 408 67.6
BraA10t43131Z Brassica rapa HOM05D004576 ORTHO05D005321 2.0e-146 523.1 408 67.4
Lj3C903T12 Lonicera japonica HOM05D004576 ORTHO05D005321 4.4e-146 521.9 407 69.5
BolC9t57147H Brassica oleracea HOM05D004576 ORTHO05D005321 5.7e-146 521.5 408 67.2
Sp6g15160 Schrenkiella parvula HOM05D004576 ORTHO05D005321 2.8e-145 519.2 401 67.6
AT5G53000 Arabidopsis thaliana HOM05D004576 ORTHO05D005321 9.1e-144 514.2 406 66.0
Gohir.A12G249400 Gossypium hirsutum HOM05D004576 ORTHO05D005321 1.5e-143 513.5 401 67.8
AL4G21090 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 2.2e-142 509.6 406 65.8
AL8G27600 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 2.2e-142 509.6 412 65.5
unitig_748.g7294 Utricularia gibba HOM05D004576 ORTHO05D005321 1.9e-141 506.5 401 66.3
Zm00001eb196410 Zea mays HOM05D004576 ORTHO05D005321 1.6e-140 503.4 399 64.9
SEGI_39808 Sequoiadendron giganteum HOM05D004576 ORTHO05D005321 2.1e-140 503.1 403 63.5
BcaC04g20518 Brassica carinata HOM05D004576 ORTHO05D005321 6.1e-140 501.5 403 65.5
Lsat_1_v5_gn_3_139541 Lactuca sativa HOM05D004576 ORTHO05D005321 1.8e-139 500.0 418 65.6
Carub.0008s1320 Capsella rubella HOM05D004576 ORTHO05D005321 6.7e-139 498.0 406 64.3
PSO170G4165 Papaver somniferum HOM05D004576 ORTHO05D005321 9.7e-138 494.2 380 65.8
Sabra15G0009800 Salix brachista HOM05D004576 ORTHO05D005321 8.2e-137 491.1 403 66.3
Medtr1g050518 Medicago truncatula HOM05D004576 ORTHO05D005321 1.1e-125 454.1 331 72.2
Os11g0141000 Oryza sativa ssp. japonica HOM05D004576 ORTHO05D005321 5.4e-120 435.3 374 62.6
Glyma.06G129650 Glycine max HOM05D005525 ORTHO05D006341 9.1e-120 434.5 318 71.4
AL8G27540 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 2.3e-118 429.9 519 48.7
PGSC0003DMG400004286 Solanum tuberosum HOM05D004576 ORTHO05D005321 2.9e-118 429.5 293 76.1
Nitab4.5_0001620g0020 Nicotiana tabacum HOM05D004576 ORTHO05D005321 9.5e-117 424.5 445 56.9
SHI02368 Sapria himalayana HOM05D004576 ORTHO05D005321 2.1e-116 423.3 435 56.6
SMO118G0543 Selaginella moellendorffii HOM05D004576 ORTHO05D005321 3.4e-114 416.0 403 55.6
Pp3c27_2200 Physcomitrium patens HOM05D004576 ORTHO05D005321 6.2e-108 395.2 405 52.1
Pp3c27_2230 Physcomitrium patens HOM05D004576 ORTHO05D005321 6.2e-108 395.2 405 52.1
BolC2t08029H Brassica oleracea HOM05D004576 ORTHO05D005321 3.0e-102 376.3 403 54.1
AagrBONN_evm.TU.Sc2ySwM_368.1428 Anthoceros agrestis HOM05D004576 ORTHO05D005321 1.1e-96 357.8 397 50.4
CiPaw.05G197500 Carya illinoinensis HOM05D004576 ORTHO05D005321 3.0e-94 349.7 402 55.0
Mapoly0036s0077 Marchantia polymorpha HOM05D004576 ORTHO05D005321 3.4e-90 336.3 406 45.6
Dinv29270 Davidia involucrata HOM05D004576 ORTHO05D005321 7.6e-82 308.5 210 76.2
BcaC03g14466 Brassica carinata HOM05D004576 ORTHO05D005321 1.1e-75 288.1 405 46.7
MBI07_g24780_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 1.3e-73 281.2 358 47.8
CBR_g54194 Chara braunii HOM05D004576 ORTHO05D005321 2.6e-66 256.9 429 38.7
MBI07_g45568_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 1.2e-63 248.1 299 47.8
C02p18880 Brassica napus HOM05D004576 ORTHO05D005321 1.1e-56 224.9 273 50.9
AL4G21010 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 2.1e-47 194.1 149 68.5
AL4G21000 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 8.2e-36 155.6 145 60.0
SGA_v2.0_scaffold44G16809 Striga asiatica HOM05D004576 ORTHO05D005321 8.8e-30 135.6 102 68.6
TAR636G2906 Trochodendron aralioides HOM05D004576 ORTHO05D005321 2.4e-27 127.5 82 80.5
Actinidia08655 Actinidia chinensis HOM05D004576 ORTHO05D005321 4.1e-27 126.7 93 71.0
ATR0602G017 Amborella trichopoda HOM05D004576 ORTHO05D005321 4.1e-27 126.7 95 65.3
MCO15G223 Micromonas commoda HOM05D004576 ORTHO05D005321 1.3e-25 121.7 427 27.9
Lj1g0016726 Lotus japonicus HOM05D004576 ORTHO05D005321 1.6e-23 114.8 128 48.4
CSS0039200 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 2.3e-22 110.9 73 75.3
AL4G21040 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 1.7e-20 104.8 187 41.7
CAN.G140.18 Capsicum annuum HOM05D004576 ORTHO05D005321 3.5e-18 97.1 69 72.5
PRCOL_00002440 Prasinoderma coloniale HOM05D004576 ORTHO05D005321 3.2e-16 90.5 440 26.1
Cfa025674 Carpinus fangiana HOM05D004576 ORTHO05D005321 1.2e-15 88.6 383 25.6
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 2.7e-15 87.4 60 65.0
ATR0602G122 Amborella trichopoda HOM05D004576 ORTHO05D005321 1.8e-14 84.7 68 57.4
CDE08G1665 Ceratophyllum demersum HOM05D004576 ORTHO05D005321 2.2e-12 77.8 62 69.4
Cre09.g395621 Chlamydomonas reinhardtii HOM05D004576 ORTHO05D005321 6.3e-12 76.3 450 22.4
BcaB05g21998 Brassica carinata HOM05D004576 ORTHO05D005321 5.0e-09 66.6 62 64.5
C03p88580 Brassica napus HOM05D004576 ORTHO05D005321 3.6e-07 60.5 86 43.0
VMungo0464G1857 Vigna mungo HOM05D004576 ORTHO05D005321 3.0e-06 57.4 34 82.4
CAN.G73.7 Capsicum annuum HOM05D003767 ORTHO05D000047 6.8e-06 56.2 68 50.0


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