Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00271 Nelumbo nucifera HOM05D001629 ORTHO05D003842 1.8e-17 91.7 50 100.0
Nn2g11902 Nelumbo nucifera HOM05D001629 ORTHO05D003842 1.1e-11 72.4 47 85.1
Nn8g39343 Nelumbo nucifera HOM05D001629 ORTHO05D003842 2.7e-10 67.8 47 76.6
TAR383G0187 Trochodendron aralioides HOM05D001629 ORTHO05D003842 7.9e-10 66.2 47 74.5
Aqoxy7G01988 Aquilegia oxysepala HOM05D001629 ORTHO05D003842 1.0e-09 65.9 47 70.2
TAR636G3140 Trochodendron aralioides HOM05D001629 ORTHO05D003842 3.9e-09 63.9 47 72.3
Hma1.2p1_0515F.1_g170350 Hydrangea macrophylla HOM05D001629 ORTHO05D003842 5.1e-09 63.5 47 66.0
PSO017G4027 Papaver somniferum HOM05D001629 ORTHO05D003842 6.7e-09 63.2 45 71.1
PSO170G0320 Papaver somniferum HOM05D001629 ORTHO05D003842 6.7e-09 63.2 45 71.1
AUR62016405 Chenopodium quinoa HOM05D001629 ORTHO05D003842 8.8e-09 62.8 47 72.3
Dinv38080 Davidia involucrata HOM05D001629 ORTHO05D003842 8.8e-09 62.8 47 68.1
Nitab4.5_0003512g0010 Nicotiana tabacum HOM05D001629 ORTHO05D003842 1.1e-08 62.4 47 66.0
CAN.G395.37 Capsicum annuum HOM05D001629 ORTHO05D003842 1.5e-08 62.0 47 63.8
Solyc06g067890.3 Solanum lycopersicum HOM05D001629 ORTHO05D003842 1.5e-08 62.0 47 63.8
Sopen06g025170 Solanum pennellii HOM05D001629 ORTHO05D003842 1.5e-08 62.0 47 63.8
PGSC0003DMG400028548 Solanum tuberosum HOM05D001629 ORTHO05D003842 1.5e-08 62.0 47 63.8
Dinv30554 Davidia involucrata HOM05D001629 ORTHO05D003842 2.0e-08 61.6 47 70.2
Nitab4.5_0000620g0170 Nicotiana tabacum HOM05D001629 ORTHO05D003842 2.6e-08 61.2 47 63.8
Sopen03g038870 Solanum pennellii HOM05D001629 ORTHO05D003842 2.6e-08 61.2 47 61.7
PGSC0003DMG400005696 Solanum tuberosum HOM05D001629 ORTHO05D003842 2.6e-08 61.2 47 61.7
AUR62011590 Chenopodium quinoa HOM05D001629 ORTHO05D003842 3.3e-08 60.8 47 70.2
Lsat_1_v5_gn_5_132821 Lactuca sativa HOM05D001629 ORTHO05D003842 3.3e-08 60.8 47 63.8
Peaxi162Scf00207g00740 Petunia axillaris HOM05D001629 ORTHO05D003842 4.4e-08 60.5 47 61.7
Lj5A67T54 Lonicera japonica HOM05D001629 ORTHO05D003842 5.7e-08 60.1 47 68.1
vmacro18952 Vaccinium macrocarpon HOM05D001629 ORTHO05D003842 5.7e-08 60.1 47 66.0
EL10Ac9g21963 Beta vulgaris HOM05D001629 ORTHO05D003842 7.4e-08 59.7 47 68.1
HanXRQChr04g0096811 Helianthus annuus HOM05D001629 ORTHO05D003842 7.4e-08 59.7 47 68.1
Solyc03g119990.4 Solanum lycopersicum HOM05D001629 ORTHO05D003842 7.4e-08 59.7 47 59.6
CDE01G0261 Ceratophyllum demersum HOM05D001629 ORTHO05D003842 9.7e-08 59.3 47 61.7
CDE02G3382 Ceratophyllum demersum HOM05D001629 ORTHO05D003842 9.7e-08 59.3 47 61.7
ClCG09G002540 Citrullus lanatus HOM05D001629 ORTHO05D003842 9.7e-08 59.3 47 63.8
MELO3C023388.2 Cucumis melo HOM05D001629 ORTHO05D003842 9.7e-08 59.3 47 63.8
CsaV3_7G032780 Cucumis sativus L. HOM05D001629 ORTHO05D003842 9.7e-08 59.3 47 63.8
HanXRQChr02g0032521 Helianthus annuus HOM05D001629 ORTHO05D003842 9.7e-08 59.3 47 59.6
Rhsim08G0217400 Rhododendron simsii HOM05D001629 ORTHO05D003842 9.7e-08 59.3 46 65.2
Hund00570 Selenicereus undatus HOM05D001629 ORTHO05D003842 9.7e-08 59.3 47 66.0
TAR625G1051 Trochodendron aralioides HOM05D001629 ORTHO05D003842 9.7e-08 59.3 45 71.1
Atru.chr1.3158 Acer truncatum HOM05D001629 ORTHO05D003842 1.3e-07 58.9 47 61.7
Lsat_1_v5_gn_1_33701 Lactuca sativa HOM05D001629 ORTHO05D003842 1.3e-07 58.9 47 66.0
QL05p027122 Quercus lobata HOM05D001629 ORTHO05D003842 1.3e-07 58.9 47 63.8
Actinidia15809 Actinidia chinensis HOM05D001629 ORTHO05D003842 1.7e-07 58.5 47 63.8
CAN.G438.91 Capsicum annuum HOM05D001629 ORTHO05D003842 1.7e-07 58.5 47 59.6
Lj9A503T44 Lonicera japonica HOM05D001629 ORTHO05D003842 1.7e-07 58.5 47 63.8
Oeu020518.1 Olea europaea HOM05D001629 ORTHO05D003842 1.7e-07 58.5 47 63.8
CSS0040650 Camellia sinensis var. sinensis HOM05D001629 ORTHO05D003842 2.8e-07 57.8 47 63.8
FvH4_6g30590 Fragaria vesca HOM05D001629 ORTHO05D003842 2.8e-07 57.8 47 63.8
FAN14G3427 Fragaria x ananassa HOM05D001629 ORTHO05D003842 2.8e-07 57.8 47 63.8
RcHm_v2.0_Chr2g0137001 Rosa chinensis HOM05D001629 ORTHO05D003842 2.8e-07 57.8 47 63.8
MD17G1202000 Malus domestica HOM05D001629 ORTHO05D003842 3.7e-07 57.4 47 63.8
Prupe.3G077700 Prunus persica HOM05D001629 ORTHO05D003842 3.7e-07 57.4 47 63.8
HanXRQChr10g0304531 Helianthus annuus HOM05D001629 ORTHO05D003842 4.8e-07 57.0 47 59.6
TWI75G0218 Tripterygium wilfordii HOM05D001629 ORTHO05D003842 4.8e-07 57.0 47 63.8
CANSAT56G2113 Cannabis sativa HOM05D001629 ORTHO05D003842 6.3e-07 56.6 47 63.8
MD09G1218700 Malus domestica HOM05D001629 ORTHO05D003842 6.3e-07 56.6 47 63.8
FAN09G3957 Fragaria x ananassa HOM05D001629 ORTHO05D003842 8.2e-07 56.2 46 63.0
Sed0020470 Sechium edule HOM05D001629 ORTHO05D003842 8.2e-07 56.2 47 59.6
Duzib235G1342 Durio zibethinus HOM05D001629 ORTHO05D003842 1.1e-06 55.8 45 64.4
Eucgr.J03032 Eucalyptus grandis HOM05D001629 ORTHO05D003842 1.1e-06 55.8 46 60.9
GSVIVG01017215001 Vitis vinifera HOM05D001629 ORTHO05D003842 1.1e-06 55.8 47 57.4
Haze_16498 Corylus avellana HOM05D001629 ORTHO05D003842 1.4e-06 55.5 47 61.7
Haze_16500 Corylus avellana HOM05D001629 ORTHO05D003842 1.4e-06 55.5 47 61.7
PGR102G2868 Punica granatum HOM05D001629 ORTHO05D003842 1.4e-06 55.5 46 60.9
DCAR_025468 Daucus carota HOM05D001629 ORTHO05D003842 1.8e-06 55.1 47 57.4
Migut.I00812 Erythranthe guttata HOM05D001629 ORTHO05D003842 1.8e-06 55.1 47 55.3
Oeu052307.2 Olea europaea HOM05D001629 ORTHO05D003842 1.8e-06 55.1 47 57.4
Sc12g0008950 Simmondsia chinensis HOM05D001629 ORTHO05D003842 1.8e-06 55.1 47 59.6
Ciclev10025112m.g Citrus clementina HOM05D001629 ORTHO05D003842 2.4e-06 54.7 47 59.6
Gohir.A05G124200 Gossypium hirsutum HOM05D001629 ORTHO05D003842 2.4e-06 54.7 46 65.2
Gohir.D05G125200 Gossypium hirsutum HOM05D001629 ORTHO05D003842 2.4e-06 54.7 46 65.2
Gorai.009G129200 Gossypium raimondii HOM05D001629 ORTHO05D003842 2.4e-06 54.7 46 65.2
Manes.04G119000 Manihot esculenta HOM05D001629 ORTHO05D003842 2.4e-06 54.7 47 61.7
Cpa.g.sc10.201 Carica papaya HOM05D001629 ORTHO05D003842 3.1e-06 54.3 47 59.6
Gohir.D10G073900 Gossypium hirsutum HOM05D001629 ORTHO05D003842 3.1e-06 54.3 44 61.4
MBI04_g00951_MAGBIO Magnolia biondii HOM05D001629 ORTHO05D003842 4.1e-06 53.9 47 59.6
Migut.D01045 Erythranthe guttata HOM05D001629 ORTHO05D003842 5.3e-06 53.5 47 53.2
Lalb_Chr22g0351061 Lupinus albus HOM05D001629 ORTHO05D003842 5.3e-06 53.5 47 55.3
BcaC03g15987 Brassica carinata HOM05D001629 ORTHO05D003842 7.0e-06 53.1 47 57.4
C02p37440 Brassica napus HOM05D001629 ORTHO05D003842 7.0e-06 53.1 47 57.4
BolC2t09756H Brassica oleracea HOM05D001629 ORTHO05D003842 7.0e-06 53.1 47 57.4
Sabra03G0034000 Salix brachista HOM05D001629 ORTHO05D003842 7.0e-06 53.1 47 57.4
THA.LOC104808220 Tarenaya hassleriana HOM05D001629 ORTHO05D003842 7.0e-06 53.1 47 59.6
Lalb_Chr14g0373601 Lupinus albus HOM05D001629 ORTHO05D003842 9.1e-06 52.8 47 55.3


User provided reference genes

Program Settings