Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.9e-81 305.1 145 100.0
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.1e-55 219.2 111 91.0
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 2.4e-46 189.1 111 76.6
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 2.4e-43 179.1 111 71.2
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 3.2e-43 178.7 111 71.2
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 1.2e-42 176.8 111 71.2
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 6.6e-41 171.0 111 66.7
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 2.5e-40 169.1 110 67.3
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 2.5e-40 169.1 111 72.1
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 3.3e-40 168.7 111 72.1
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 7.3e-40 167.5 111 65.8
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 9.6e-40 167.2 111 70.3
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 9.6e-40 167.2 112 66.1
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.3e-39 166.8 113 68.1
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.6e-39 166.4 104 70.2
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 1.6e-39 166.4 111 69.4
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 3.6e-39 165.2 111 66.7
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 1.4e-38 163.3 118 63.6
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 1.8e-38 162.9 112 67.0
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 3.1e-38 162.2 112 64.3
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 3.1e-38 162.2 111 66.7
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 4.0e-38 161.8 111 65.8
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 4.0e-38 161.8 111 62.2
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 4.0e-38 161.8 111 66.7
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 5.3e-38 161.4 111 66.7
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 6.9e-38 161.0 115 67.0
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 1.2e-37 160.2 111 62.2
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 2.6e-37 159.1 126 58.7
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 3.4e-37 158.7 113 66.4
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 3.4e-37 158.7 111 64.9
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 3.4e-37 158.7 116 60.3
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 4.5e-37 158.3 111 64.0
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 5.8e-37 157.9 111 64.9
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 5.8e-37 157.9 121 62.8
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 7.6e-37 157.5 111 64.9
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 1.7e-36 156.4 113 64.6
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 1.7e-36 156.4 108 60.2
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 2.2e-36 156.0 111 59.5
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 2.9e-36 155.6 111 62.2
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 2.9e-36 155.6 108 62.0
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 3.8e-36 155.2 111 62.2
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 4.9e-36 154.8 111 63.1
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 6.4e-36 154.5 111 63.1
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 6.4e-36 154.5 108 62.0
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 1.4e-35 153.3 111 63.1
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 1.9e-35 152.9 111 60.4
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 4.2e-35 151.8 108 63.0
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 4.2e-35 151.8 111 63.1
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 4.2e-35 151.8 121 57.9
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 5.4e-35 151.4 111 59.5
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 7.1e-35 151.0 118 61.0
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 7.1e-35 151.0 111 60.4
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 9.3e-35 150.6 114 60.5
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 2.1e-34 149.4 101 63.4
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 2.1e-34 149.4 108 62.0
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 6.0e-34 147.9 102 62.7
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 1.0e-33 147.1 101 62.4
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 1.3e-33 146.7 111 57.7
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 1.3e-33 146.7 111 62.2
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 2.3e-33 146.0 111 58.6
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 3.0e-33 145.6 111 62.2
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 3.0e-33 145.6 111 59.5
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 3.9e-33 145.2 111 58.6
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 3.9e-33 145.2 111 58.6
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 6.7e-33 144.4 112 59.8
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 1.9e-32 142.9 111 57.7
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 1.9e-32 142.9 111 56.8
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 3.3e-32 142.1 111 59.5
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 5.6e-32 141.4 111 57.7
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 7.4e-32 141.0 111 56.8
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.3e-31 140.2 111 64.9
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 2.8e-31 139.0 111 58.6
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 2.8e-31 139.0 111 58.6
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 3.7e-31 138.7 112 58.9
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 6.2e-31 137.9 111 53.2
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 1.4e-30 136.7 113 55.8
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 1.8e-30 136.3 116 53.4
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 2.4e-30 136.0 112 55.4
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 3.4e-29 132.1 97 57.7
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 7.6e-29 131.0 74 74.3
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 2.2e-28 129.4 101 62.4
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 4.9e-28 128.3 108 50.9
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 4.9e-28 128.3 108 50.9
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 1.4e-27 126.7 112 56.2
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 1.6e-26 123.2 105 55.2
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.3e-25 119.4 70 74.3
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 1.1e-24 117.1 108 49.1
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 2.4e-22 109.4 118 41.5
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 4.6e-18 95.1 81 54.3
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 4.6e-18 95.1 119 42.0
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.2e-11 72.0 35 85.7
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.2e-10 70.5 111 37.8
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.2e-10 70.5 67 50.7
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 4.6e-10 68.6 66 42.4
Aqoxy6G00222 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.8e-09 66.6 61 49.2
Nn1g02485 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.3e-08 62.0 73 46.6
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 6.9e-06 54.7 42 54.8


User provided reference genes

Program Settings