Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 1.0e-268 929.5 465 100.0
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 1.3e-186 656.8 438 74.9
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 2.5e-174 615.9 407 76.4
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 7.3e-174 614.4 385 76.1
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 1.4e-172 610.1 386 76.4
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 6.8e-172 607.8 405 75.8
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 1.2e-171 607.1 405 75.8
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 2.0e-171 606.3 413 73.4
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 7.5e-171 604.4 429 71.6
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 4.6e-168 595.1 404 73.3
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 6.0e-168 594.7 383 74.9
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 3.9e-167 592.0 386 74.4
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 8.6e-167 590.9 382 75.7
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 5.6e-166 588.2 383 75.2
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 2.8e-165 585.9 415 71.3
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 1.1e-164 583.9 399 72.7
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 1.1e-164 583.9 383 74.4
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 3.1e-164 582.4 404 71.8
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 4.0e-164 582.0 380 75.3
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 5.2e-164 581.6 417 71.7
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 3.4e-163 578.9 376 75.5
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 4.4e-163 578.6 378 74.6
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 4.4e-163 578.6 380 73.7
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 5.8e-163 578.2 375 74.4
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 7.1e-161 571.2 385 70.9
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 9.2e-161 570.9 381 71.7
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 2.7e-160 569.3 381 71.1
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 7.8e-160 567.8 372 75.3
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 1.0e-159 567.4 392 71.7
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 1.0e-159 567.4 412 68.0
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 1.7e-159 566.6 408 68.6
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 2.3e-159 566.2 387 72.4
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 1.1e-158 563.9 392 71.4
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 1.1e-158 563.9 374 73.0
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 1.5e-158 563.5 402 66.7
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 3.3e-158 562.4 392 71.2
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 1.4e-156 557.0 389 69.7
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 8.9e-156 554.3 386 69.4
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 3.4e-155 552.4 379 70.2
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 5.8e-155 551.6 368 73.1
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 7.6e-155 551.2 413 67.8
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 1.3e-154 550.4 371 70.4
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 4.9e-154 548.5 377 70.8
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 6.4e-154 548.1 373 71.8
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 4.2e-153 545.4 412 67.5
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 5.4e-153 545.0 373 69.7
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 1.0e-151 540.8 405 67.9
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 3.0e-151 539.3 416 66.8
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 6.6e-151 538.1 384 69.0
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 8.7e-151 537.7 416 67.1
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 2.5e-150 536.2 384 70.1
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 7.3e-150 534.6 362 71.8
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 1.3e-149 533.9 387 69.0
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 1.6e-149 533.5 416 65.4
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 1.6e-149 533.5 374 69.5
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 2.8e-149 532.7 387 68.7
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 2.8e-149 532.7 387 68.7
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 2.8e-149 532.7 374 68.7
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 6.2e-149 531.6 390 68.5
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 1.8e-148 530.0 344 75.9
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 9.0e-148 527.7 416 64.7
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 6.4e-146 521.5 405 64.0
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 3.2e-145 519.2 393 64.9
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 7.1e-145 518.1 393 65.6
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 4.6e-144 515.4 407 63.6
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 3.9e-143 512.3 371 67.1
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 5.1e-143 511.9 376 67.3
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 2.5e-142 509.6 416 64.2
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.6e-141 506.9 382 66.5
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 2.8e-141 506.1 354 72.6
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 3.6e-141 505.8 382 64.9
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 1.2e-139 500.7 389 66.1
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 4.5e-139 498.8 380 65.5
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 8.4e-138 494.6 391 64.5
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 1.9e-137 493.4 443 59.4
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 6.0e-136 488.4 320 73.8
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 1.3e-135 487.3 364 69.0
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 3.0e-135 486.1 370 67.0
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 1.3e-133 480.7 374 64.4
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 2.1e-133 479.9 321 73.5
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 3.7e-133 479.2 408 61.3
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 1.2e-131 474.2 376 63.0
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 1.0e-130 471.1 393 62.8
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 1.1e-129 467.6 381 62.5
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 1.1e-129 467.6 409 60.4
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 4.3e-126 455.7 282 79.1
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 5.7e-126 455.3 299 73.6
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 6.5e-122 441.8 362 65.2
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 6.1e-120 435.3 282 73.4
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 9.7e-118 427.9 313 69.6
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 2.9e-114 416.4 270 74.4
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 2.5e-110 403.3 405 52.6
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 4.2e-105 386.0 318 62.9
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 1.6e-104 384.0 280 69.3
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 6.1e-104 382.1 400 50.5
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 5.7e-102 375.6 320 60.3
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 7.0e-100 368.6 325 60.0
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 9.1e-100 368.2 393 52.9
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 4.3e-73 279.6 324 46.9
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 9.8e-62 241.9 417 38.8
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 3.2e-52 210.3 143 71.3
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 6.0e-43 179.5 210 46.7
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 3.0e-42 177.2 127 63.8
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 1.1e-39 168.7 107 72.9
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 4.5e-30 136.7 72 90.3
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 1.2e-27 128.6 78 76.9
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 1.1e-20 105.5 55 89.1
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 4.2e-20 103.6 70 67.1
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 3.3e-17 94.0 55 76.4
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 2.7e-11 74.3 226 27.9
Pp3c10_6850 Physcomitrium patens HOM05D002406 ORTHO05D006947 3.9e-10 70.5 358 25.1
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 3.3e-09 67.4 96 38.5
MCO05G602 Micromonas commoda HOM05D007064 ORTHO05D008772 6.9e-07 59.7 386 23.3
Pp3c26_5140 Physcomitrium patens HOM05D002406 ORTHO05D007964 4.5e-06 57.0 264 25.0
MELO3C002949.2 Cucumis melo HOM05D002406 ORTHO05D007964 7.6e-06 56.2 258 23.6
ClCG03G009900 Citrullus lanatus HOM05D002406 ORTHO05D007964 1.0e-05 55.8 258 23.3


User provided reference genes

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