Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00141 Nelumbo nucifera HOM05D006865 ORTHO05D009005 2.6e-26 121.3 63 100.0
Nn3g18133 Nelumbo nucifera HOM05D006865 ORTHO05D009005 5.7e-13 77.0 51 82.4
Nn5g30747 Nelumbo nucifera HOM05D006865 ORTHO05D009005 6.9e-11 70.1 44 86.4
Nn6g34726 Nelumbo nucifera HOM05D006865 ORTHO05D009005 2.2e-09 65.1 44 77.3
Nn2g11491 Nelumbo nucifera HOM05D006865 ORTHO05D009005 2.9e-09 64.7 42 78.6
Dinv30268 Davidia involucrata HOM05D006865 ORTHO05D009005 5.0e-09 63.9 46 76.1
CSS0046438 Camellia sinensis var. sinensis HOM05D006865 ORTHO05D009005 1.1e-08 62.8 46 73.9
Nn2g10603 Nelumbo nucifera HOM05D006865 ORTHO05D009005 1.1e-08 62.8 46 67.4
TAR636G1122 Trochodendron aralioides HOM05D006865 ORTHO05D009005 1.9e-08 62.0 51 68.6
CiPaw.07G205700 Carya illinoinensis HOM05D006865 ORTHO05D009005 4.2e-08 60.8 50 70.0
Lj8A588T26 Lonicera japonica HOM05D006865 ORTHO05D009005 4.2e-08 60.8 46 69.6
Ciclev10008902m.g Citrus clementina HOM05D006865 ORTHO05D009005 9.4e-08 59.7 52 65.4
Thecc.09G042300 Theobroma cacao HOM05D006865 ORTHO05D009005 2.1e-07 58.5 51 66.7
Aqoxy7G03866 Aquilegia oxysepala HOM05D006865 ORTHO05D009005 3.6e-07 57.8 42 71.4
FvH4_2g35860 Fragaria vesca HOM05D006865 ORTHO05D009005 3.6e-07 57.8 49 67.3
FAN27G2310 Fragaria x ananassa HOM05D006865 ORTHO05D009005 3.6e-07 57.8 49 67.3
Potri.006G240400 Populus trichocarpa HOM05D006865 ORTHO05D009005 3.6e-07 57.8 48 70.8
Duzib187G1827 Durio zibethinus HOM05D006865 ORTHO05D009005 4.6e-07 57.4 51 62.7
FAN15G3339 Fragaria x ananassa HOM05D006865 ORTHO05D009005 4.6e-07 57.4 49 65.3
RcHm_v2.0_Chr6g0305961 Rosa chinensis HOM05D006865 ORTHO05D009005 4.6e-07 57.4 49 65.3
Sabra06G0188000 Salix brachista HOM05D006865 ORTHO05D009005 4.6e-07 57.4 48 68.8
Atru.chr7.2136 Acer truncatum HOM05D006865 ORTHO05D009005 6.1e-07 57.0 52 61.5
PSO210G4422 Papaver somniferum HOM05D006865 ORTHO05D009005 6.1e-07 57.0 44 70.5
PSO210G5031 Papaver somniferum HOM05D006865 ORTHO05D009005 6.1e-07 57.0 44 70.5
TWI63G0791 Tripterygium wilfordii HOM05D006865 ORTHO05D009005 6.1e-07 57.0 49 67.3
Haze_19694 Corylus avellana HOM05D006865 ORTHO05D009005 1.0e-06 56.2 48 68.8
Lsat_1_v5_gn_1_49660 Lactuca sativa HOM05D006865 ORTHO05D009005 1.0e-06 56.2 50 62.0
QL12p029455 Quercus lobata HOM05D006865 ORTHO05D009005 1.0e-06 56.2 51 64.7
MD15G1095700 Malus domestica HOM05D006865 ORTHO05D009005 3.0e-06 54.7 49 63.3
Actinidia31233 Actinidia chinensis HOM05D006865 ORTHO05D009005 3.9e-06 54.3 46 67.4
Cfa016677 Carpinus fangiana HOM05D006865 ORTHO05D009005 5.1e-06 53.9 48 66.7
COL.COLO4_18674 Corchorus olitorius HOM05D003951 ORTHO05D005378 5.1e-06 53.9 50 64.0


User provided reference genes

Program Settings