Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00073 Nelumbo nucifera HOM05D003652 ORTHO05D004190 6.0e-77 290.8 151 100.0
Nn1g06100 Nelumbo nucifera HOM05D003652 ORTHO05D004190 6.4e-63 244.2 118 100.0
Nn5g28722 Nelumbo nucifera HOM05D003652 ORTHO05D004190 2.8e-42 175.6 118 68.6
TAR376G0660 Trochodendron aralioides HOM05D003652 ORTHO05D004190 1.0e-36 157.1 118 61.9
Aqoxy5G02100 Aquilegia oxysepala HOM05D003652 ORTHO05D004190 1.8e-36 156.4 118 62.7
TAR628G0150 Trochodendron aralioides HOM05D003652 ORTHO05D004190 7.4e-35 151.0 118 60.2
Glyma.20G174900 Glycine max HOM05D003652 ORTHO05D004190 1.3e-34 150.2 118 63.6
Thecc.08G150000 Theobroma cacao HOM05D003652 ORTHO05D004190 4.8e-34 148.3 118 61.9
PSO210G4735 Papaver somniferum HOM05D003652 ORTHO05D004190 1.1e-33 147.1 115 60.0
Dinv25854 Davidia involucrata HOM05D003652 ORTHO05D004190 1.8e-33 146.4 118 58.5
GSVIVG01034519001 Vitis vinifera HOM05D003652 ORTHO05D004190 3.1e-33 145.6 118 60.2
Dinv41091 Davidia involucrata HOM05D003652 ORTHO05D004190 4.1e-33 145.2 118 58.5
Glyma.10G217200 Glycine max HOM05D003652 ORTHO05D004190 9.1e-33 144.1 118 61.9
PSO238G0028 Papaver somniferum HOM05D003652 ORTHO05D004190 9.1e-33 144.1 115 59.1
ATR0772G136 Amborella trichopoda HOM05D003652 ORTHO05D004190 1.2e-32 143.7 118 52.5
SalBow6G6910 Salvia bowleyana HOM05D003652 ORTHO05D004190 1.2e-32 143.7 117 60.7
PGR042G2936 Punica granatum HOM05D003652 ORTHO05D004190 1.5e-32 143.3 117 59.0
TPR.G8817 Trifolium pratense HOM05D003652 ORTHO05D004190 2.0e-32 142.9 118 62.7
TWI34G0668 Tripterygium wilfordii HOM05D003652 ORTHO05D004190 2.0e-32 142.9 118 59.3
Cfa013845 Carpinus fangiana HOM05D003652 ORTHO05D004190 4.5e-32 141.7 118 58.5
CANSAT25G1176 Cannabis sativa HOM05D003652 ORTHO05D004190 5.9e-32 141.4 118 54.2
Haze_22519 Corylus avellana HOM05D003652 ORTHO05D004190 7.7e-32 141.0 118 58.5
Gohir.A02G064300 Gossypium hirsutum HOM05D003652 ORTHO05D004190 7.7e-32 141.0 118 59.3
Gohir.D02G070200 Gossypium hirsutum HOM05D003652 ORTHO05D004190 7.7e-32 141.0 118 59.3
Gorai.005G079300 Gossypium raimondii HOM05D003652 ORTHO05D004190 7.7e-32 141.0 118 59.3
QL02p033637 Quercus lobata HOM05D003652 ORTHO05D004190 7.7e-32 141.0 119 58.0
RcHm_v2.0_Chr1g0332001 Rosa chinensis HOM05D003652 ORTHO05D004190 1.0e-31 140.6 118 57.6
Atru.chr13.2145 Acer truncatum HOM05D003652 ORTHO05D004190 1.3e-31 140.2 118 59.3
Ca_10620_v3 Cicer arietinum L. HOM05D003652 ORTHO05D004190 1.7e-31 139.8 120 59.2
Manes.02G178800 Manihot esculenta HOM05D003652 ORTHO05D004190 1.7e-31 139.8 118 60.2
VMungo0720G3010 Vigna mungo HOM05D003652 ORTHO05D004190 1.7e-31 139.8 117 59.0
TWI60G1418 Tripterygium wilfordii HOM05D003652 ORTHO05D004190 2.9e-31 139.0 118 57.6
Oeu011939.2 Olea europaea HOM05D003652 ORTHO05D004190 3.8e-31 138.7 118 57.6
Psat6g186720 Pisum sativum HOM05D003652 ORTHO05D004190 3.8e-31 138.7 118 59.3
Lalb_Chr21g0305741 Lupinus albus HOM05D003652 ORTHO05D004190 5.0e-31 138.3 118 59.3
COL.COLO4_37835 Corchorus olitorius HOM05D003652 ORTHO05D004190 1.1e-30 137.1 119 59.7
Duzib116G0402 Durio zibethinus HOM05D003652 ORTHO05D004190 1.1e-30 137.1 118 57.6
Actinidia10649 Actinidia chinensis HOM05D003652 ORTHO05D004190 1.4e-30 136.7 118 57.6
FvH4_7g05280 Fragaria vesca HOM05D003652 ORTHO05D004190 1.4e-30 136.7 121 57.9
Lj5g0007913 Lotus japonicus HOM05D003652 ORTHO05D004190 1.4e-30 136.7 118 58.5
Migut.N03225 Erythranthe guttata HOM05D003652 ORTHO05D004190 1.9e-30 136.3 118 59.3
Phvul.007G088900 Phaseolus vulgaris HOM05D003652 ORTHO05D004190 1.9e-30 136.3 117 58.1
Potri.002G068900 Populus trichocarpa HOM05D003652 ORTHO05D004190 2.5e-30 136.0 118 55.9
CSS0021982 Camellia sinensis var. sinensis HOM05D003652 ORTHO05D004190 3.2e-30 135.6 118 55.9
FAN10G0990 Fragaria x ananassa HOM05D003652 ORTHO05D004190 3.2e-30 135.6 118 56.8
FAN01G0918 Fragaria x ananassa HOM05D003652 ORTHO05D004190 4.2e-30 135.2 118 56.8
FAN03G2156 Fragaria x ananassa HOM05D003652 ORTHO05D004190 4.2e-30 135.2 118 56.8
FAN06G2696 Fragaria x ananassa HOM05D003652 ORTHO05D004190 4.2e-30 135.2 118 56.8
Hma1.2p1_0105F.1_g050770 Hydrangea macrophylla HOM05D003652 ORTHO05D004190 4.2e-30 135.2 118 54.2
Sed0009622 Sechium edule HOM05D003652 ORTHO05D004190 4.2e-30 135.2 118 58.5
Cpa.g.sc21.193 Carica papaya HOM05D003652 ORTHO05D004190 5.5e-30 134.8 118 55.9
Nitab4.5_0005926g0010 Nicotiana tabacum HOM05D003652 ORTHO05D004190 5.5e-30 134.8 118 59.3
Peaxi162Scf00765g00049 Petunia axillaris HOM05D003652 ORTHO05D004190 7.2e-30 134.4 118 58.5
Rhsim08G0021800 Rhododendron simsii HOM05D003652 ORTHO05D004190 9.4e-30 134.0 118 56.8
Sabra02G0054200 Salix brachista HOM05D003652 ORTHO05D004190 9.4e-30 134.0 118 55.1
AUR62026715 Chenopodium quinoa HOM05D003652 ORTHO05D004190 1.2e-29 133.7 118 53.4
AUR62013575 Chenopodium quinoa HOM05D003652 ORTHO05D004190 1.6e-29 133.3 118 52.5
Medtr1g096550 Medicago truncatula HOM05D003652 ORTHO05D004190 1.6e-29 133.3 118 58.5
Sabra05G0146300 Salix brachista HOM05D003652 ORTHO05D004190 1.6e-29 133.3 118 55.9
MD07G1075500 Malus domestica HOM05D003652 ORTHO05D004190 2.1e-29 132.9 118 55.9
Potri.005G191500 Populus trichocarpa HOM05D003652 ORTHO05D004190 2.1e-29 132.9 118 56.8
Sc02g0004140 Simmondsia chinensis HOM05D003652 ORTHO05D004190 2.7e-29 132.5 118 54.2
SGA_v2.0_scaffold19G08667 Striga asiatica HOM05D003652 ORTHO05D004190 2.7e-29 132.5 118 57.6
vmacro18508 Vaccinium macrocarpon HOM05D003652 ORTHO05D004190 2.7e-29 132.5 118 55.9
ClCG09G010020 Citrullus lanatus HOM05D003652 ORTHO05D004190 3.6e-29 132.1 118 55.9
Ciclev10000108m.g Citrus clementina HOM05D003652 ORTHO05D004190 3.6e-29 132.1 118 55.1
arahy.Tifrunner.gnm1.ann1.2W1LLW Arachis hypogaea HOM05D003652 ORTHO05D004190 4.6e-29 131.7 118 60.2
arahy.Tifrunner.gnm1.ann1.8KD3C5 Arachis hypogaea HOM05D003652 ORTHO05D004190 4.6e-29 131.7 118 60.2
Lj7C372G9 Lonicera japonica HOM05D003652 ORTHO05D004190 1.8e-28 129.8 118 53.4
Nitab4.5_0005705g0020 Nicotiana tabacum HOM05D003652 ORTHO05D004190 1.8e-28 129.8 118 58.5
unitig_744.g24568 Utricularia gibba HOM05D003652 ORTHO05D004190 1.8e-28 129.8 118 56.8
Prupe.8G058700 Prunus persica HOM05D003652 ORTHO05D004190 3.0e-28 129.0 118 51.7
Ah.05g167890 Amaranthus hybridus HOM05D003652 ORTHO05D004190 3.9e-28 128.6 118 50.8
Rhsim10G0066500 Rhododendron simsii HOM05D003652 ORTHO05D004190 5.1e-28 128.3 115 55.7
MD02G1241400 Malus domestica HOM05D003652 ORTHO05D004190 6.7e-28 127.9 118 55.1
EL10Ac1g01536 Beta vulgaris HOM05D003652 ORTHO05D004190 4.4e-27 125.2 114 50.9
CDE08G0217 Ceratophyllum demersum HOM05D003652 ORTHO05D004190 4.4e-27 125.2 118 54.2
Sopen04g027310 Solanum pennellii HOM05D003652 ORTHO05D004190 4.4e-27 125.2 118 55.1
CAN.G268.10 Capsicum annuum HOM05D003652 ORTHO05D004190 5.7e-27 124.8 118 54.2
CsaV3_7G024680 Cucumis sativus L. HOM05D003652 ORTHO05D004190 7.4e-27 124.4 118 55.1
Hund26699 Selenicereus undatus HOM05D003652 ORTHO05D004190 7.4e-27 124.4 118 50.8
Actinidia29525 Actinidia chinensis HOM05D003652 ORTHO05D004190 9.7e-27 124.0 114 54.4
SGA_v2.0_scaffold25G11172 Striga asiatica HOM05D003652 ORTHO05D004190 9.7e-27 124.0 115 53.0
Cc10_g14750 Coffea canephora HOM05D003652 ORTHO05D004190 1.3e-26 123.6 118 53.4
MSTRG.22372 Avicennia marina HOM05D003652 ORTHO05D004190 1.7e-26 123.2 118 50.8
CiPaw.07G160100 Carya illinoinensis HOM05D003652 ORTHO05D004190 1.7e-26 123.2 118 51.7
Solyc04g071350.3 Solanum lycopersicum HOM05D003652 ORTHO05D004190 2.8e-26 122.5 118 54.2
ECA236G0544 Erigeron canadensis HOM05D003652 ORTHO05D004190 4.8e-26 121.7 118 50.8
Eucgr.F04242 Eucalyptus grandis HOM05D003652 ORTHO05D004190 4.8e-26 121.7 117 52.1
DCAR_014431 Daucus carota HOM05D003652 ORTHO05D004190 1.1e-25 120.6 118 50.8
CAN.G89.17 Capsicum annuum HOM05D003652 ORTHO05D004190 1.8e-25 119.8 118 54.2
HanXRQChr11g0339321 Helianthus annuus HOM05D003652 ORTHO05D004190 1.8e-25 119.8 118 50.8
Nitab4.5_0008106g0010 Nicotiana tabacum HOM05D003652 ORTHO05D004190 2.4e-25 119.4 118 55.1
Sopen12g029110 Solanum pennellii HOM05D003652 ORTHO05D004190 4.1e-25 118.6 118 55.1
MELO3C024093.2 Cucumis melo HOM05D003652 ORTHO05D004190 9.1e-25 117.5 118 53.4
Solyc12g056520.3 Solanum lycopersicum HOM05D003652 ORTHO05D004190 9.1e-25 117.5 118 54.2
Peaxi162Scf01294g00125 Petunia axillaris HOM05D003652 ORTHO05D004190 1.2e-24 117.1 118 55.9
Nitab4.5_0000140g0050 Nicotiana tabacum HOM05D003652 ORTHO05D004190 2.0e-24 116.3 118 55.1
Lsat_1_v5_gn_7_71861 Lactuca sativa HOM05D003652 ORTHO05D004190 2.6e-24 115.9 121 49.6
Zm00001eb422350 Zea mays HOM05D003652 ORTHO05D004190 4.5e-24 115.2 118 53.4
Zm00001eb083200 Zea mays HOM05D003652 ORTHO05D004190 1.0e-23 114.0 118 51.7
Os04g0421900 Oryza sativa ssp. japonica HOM05D003652 ORTHO05D004190 2.9e-23 112.5 118 48.3
SEGI_34715 Sequoiadendron giganteum HOM05D003652 ORTHO05D004190 1.4e-22 110.2 117 43.6
AL1G34230 Arabidopsis lyrata HOM05D003652 ORTHO05D004190 4.2e-22 108.6 118 44.1
AT1G21170 Arabidopsis thaliana HOM05D003652 ORTHO05D004190 9.4e-22 107.5 118 43.2
CARHR070360 Cardamine hirsuta HOM05D003652 ORTHO05D004190 9.4e-22 107.5 118 44.1
Sp1g18810 Schrenkiella parvula HOM05D003652 ORTHO05D004190 2.1e-21 106.3 118 41.5
Aa31LG7G5310 Aethionema arabicum HOM05D003652 ORTHO05D004190 2.7e-21 105.9 118 44.9
Carub.0002s2373 Capsella rubella HOM05D003652 ORTHO05D004190 3.6e-21 105.5 118 44.1
AT1G76850 Arabidopsis thaliana HOM05D003652 ORTHO05D004190 4.7e-21 105.1 118 44.1
AL2G36970 Arabidopsis lyrata HOM05D003652 ORTHO05D004190 6.1e-21 104.8 120 44.2
Thhalv10006745m.g Eutrema salsugineum HOM05D003652 ORTHO05D004190 1.0e-20 104.0 118 42.4
Carub.0001s2061 Capsella rubella HOM05D003652 ORTHO05D004190 2.3e-20 102.8 118 42.4
THA.LOC104812038 Tarenaya hassleriana HOM05D003652 ORTHO05D004190 2.3e-20 102.8 118 44.9
BcaC08g45509 Brassica carinata HOM05D003652 ORTHO05D004190 3.0e-20 102.4 118 43.2
A07p28340 Brassica napus HOM05D003652 ORTHO05D004190 3.0e-20 102.4 118 43.2
C06p31780 Brassica napus HOM05D003652 ORTHO05D004190 3.0e-20 102.4 118 43.2
BolC6t38307H Brassica oleracea HOM05D003652 ORTHO05D004190 3.0e-20 102.4 118 43.2
BraA07t30471Z Brassica rapa HOM05D003652 ORTHO05D004190 3.0e-20 102.4 118 43.2
BcaB02g07077 Brassica carinata HOM05D003652 ORTHO05D004190 6.7e-20 101.3 118 42.4
Sp5g31980 Schrenkiella parvula HOM05D003652 ORTHO05D004190 8.8e-20 100.9 118 43.2
CARHR021630 Cardamine hirsuta HOM05D003652 ORTHO05D004190 1.1e-19 100.5 118 41.5
MBI09_g20113_MAGBIO Magnolia biondii HOM05D003652 ORTHO05D004190 1.5e-19 100.1 119 47.9
C02p34110 Brassica napus HOM05D003652 ORTHO05D004190 2.0e-19 99.8 110 43.6
Thhalv10018046m.g Eutrema salsugineum HOM05D003652 ORTHO05D004190 2.6e-19 99.4 118 42.4
Aa31LG4G6890 Aethionema arabicum HOM05D003652 ORTHO05D004190 3.3e-19 99.0 118 41.5
ECA247G2571 Erigeron canadensis HOM05D003652 ORTHO05D004190 1.4e-17 93.6 118 43.2
HanXRQChr02g0045411 Helianthus annuus HOM05D003652 ORTHO05D004190 1.8e-17 93.2 117 45.3
HanXRQChr06g0174441 Helianthus annuus HOM05D003652 ORTHO05D004190 1.8e-17 93.2 117 45.3
SHI18207 Sapria himalayana HOM05D003652 ORTHO05D004190 2.4e-17 92.8 104 48.1
BcaC03g15706 Brassica carinata HOM05D003652 ORTHO05D004190 7.7e-16 87.8 111 42.3
BolC2t09427H Brassica oleracea HOM05D003652 ORTHO05D004190 7.7e-16 87.8 111 42.3
CDE06G1552 Ceratophyllum demersum HOM05D003652 ORTHO05D004190 1.0e-15 87.4 87 52.9
AagrBONN_evm.TU.Sc2ySwM_344.5035 Anthoceros agrestis HOM05D003652 ORTHO05D004190 1.2e-13 80.5 116 42.2
Pp3c5_4060 Physcomitrium patens HOM05D003652 ORTHO05D004190 4.0e-12 75.5 116 37.1
Pp3c1_7430 Physcomitrium patens HOM05D003652 ORTHO05D004190 2.6e-11 72.8 117 35.9
Pp3c11_13110 Physcomitrium patens HOM05D003652 ORTHO05D004190 4.4e-11 72.0 121 37.2
Mapoly0098s0037 Marchantia polymorpha HOM05D003652 ORTHO05D004190 2.8e-10 69.3 118 33.1
SMO118G0055 Selaginella moellendorffii HOM05D003652 ORTHO05D004190 2.2e-07 59.7 114 33.3
Pp3c24_1100 Physcomitrium patens HOM05D003652 ORTHO05D004190 2.5e-06 56.2 122 30.3
Lalb_Chr02g0141781 Lupinus albus HOM05D003652 ORTHO05D004190 7.2e-06 54.7 43 60.5


User provided reference genes

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