Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 2.8e-93 345.5 208 100.0
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 6.7e-87 324.3 167 99.4
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 1.4e-44 183.7 168 60.1
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 1.7e-37 160.2 168 55.4
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 8.9e-31 137.9 169 47.9
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 5.8e-30 135.2 153 50.3
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 1.3e-29 134.0 144 54.9
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 2.2e-29 133.3 169 46.7
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 3.8e-29 132.5 170 45.3
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 4.9e-29 132.1 154 50.6
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 8.4e-29 131.3 149 49.0
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 1.9e-28 130.2 159 45.3
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 4.2e-28 129.0 169 44.4
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 1.5e-25 120.6 141 51.1
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 2.5e-25 119.8 166 44.0
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 1.2e-24 117.5 165 46.1
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 1.2e-24 117.5 169 42.6
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 2.1e-24 116.7 159 46.5
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 1.8e-23 113.6 123 51.2
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 2.4e-23 113.2 171 45.0
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 3.1e-23 112.8 170 41.8
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 3.1e-23 112.8 170 41.8
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 3.1e-23 112.8 170 41.8
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 6.9e-23 111.7 156 41.0
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 9.0e-23 111.3 170 41.8
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.2e-22 110.9 170 41.8
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 7.6e-22 108.2 134 50.0
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 2.9e-21 106.3 149 41.6
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 2.9e-21 106.3 170 42.9
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 8.4e-21 104.8 131 45.8
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 8.4e-21 104.8 131 45.8
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 8.4e-21 104.8 137 47.4
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 8.4e-21 104.8 162 42.0
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 1.1e-20 104.4 160 41.2
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 1.9e-20 103.6 134 48.5
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 2.4e-20 103.2 131 42.0
Duzib268G0147 Durio zibethinus HOM05D006138 ORTHO05D007778 7.1e-20 101.7 118 47.5
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 7.1e-20 101.7 136 45.6
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 9.3e-20 101.3 140 40.0
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 3.5e-19 99.4 170 40.0
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 4.6e-19 99.0 123 44.7
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 4.6e-19 99.0 148 38.5
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 6.0e-19 98.6 134 45.5
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 7.8e-19 98.2 137 47.4
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 1.3e-18 97.4 167 39.5
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 2.3e-18 96.7 130 39.2
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 3.9e-18 95.9 128 42.2
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 3.9e-18 95.9 145 40.7
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 3.9e-18 95.9 159 37.7
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 6.6e-18 95.1 144 41.0
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 8.7e-18 94.7 131 42.7
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 7.3e-17 91.7 154 38.3
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 1.6e-16 90.5 105 50.5
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 2.8e-16 89.7 141 41.8
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 3.6e-16 89.4 131 42.7
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 8.1e-16 88.2 113 44.2
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 1.1e-15 87.8 108 42.6
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 1.4e-15 87.4 132 37.9
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 1.4e-15 87.4 146 39.0
FAN17G0457 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.8e-15 87.0 154 37.7
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 2.4e-15 86.7 152 32.9
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 3.1e-15 86.3 152 38.2
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 4.0e-15 85.9 152 38.8
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 6.9e-15 85.1 154 36.4
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 9.0e-15 84.7 122 39.3
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 1.2e-14 84.3 123 38.2
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 1.5e-14 84.0 152 32.9
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 1.5e-14 84.0 152 32.2
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 4.5e-14 82.4 128 36.7
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 4.5e-14 82.4 116 42.2
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 5.8e-14 82.0 149 33.6
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 5.8e-14 82.0 145 41.4
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 1.7e-13 80.5 156 34.0
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 1.7e-13 80.5 102 39.2
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 4.9e-13 79.0 128 32.0
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 6.4e-13 78.6 129 38.0
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 6.4e-13 78.6 149 30.9
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 8.4e-13 78.2 128 32.0
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 1.9e-12 77.0 114 37.7
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 5.4e-12 75.5 115 33.0
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 7.1e-12 75.1 139 34.5
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 6.0e-11 72.0 120 41.7
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.3e-10 70.9 124 41.1
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.3e-10 70.9 124 41.1
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 1.3e-10 70.9 153 32.7
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 1.8e-10 70.5 123 40.7
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 1.8e-10 70.5 135 30.4
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 3.9e-10 69.3 128 40.6
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 8.7e-10 68.2 152 36.8
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 8.7e-10 68.2 138 36.2
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.9e-09 67.0 119 34.5
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 1.6e-08 63.9 83 38.6
RcHm_v2.0_Chr4g0419401 Rosa chinensis HOM05D006138 ORTHO05D007778 2.1e-08 63.5 100 37.0
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 2.1e-08 63.5 113 33.6
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 4.8e-08 62.4 153 29.4
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 8.1e-08 61.6 67 47.8
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 2.4e-07 60.1 113 30.1
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 3.1e-07 59.7 65 44.6
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 4.0e-07 59.3 60 50.0
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 1.2e-06 57.8 108 30.6
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 3.4e-06 56.2 91 28.6


User provided reference genes

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