Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn071s42395 Nelumbo nucifera HOM05D001033 ORTHO05D005438 3.1e-30 134.4 65 100.0
Nn010s41425 Nelumbo nucifera HOM05D001033 ORTHO05D005438 1.4e-14 82.4 42 100.0
Nn1g03017 Nelumbo nucifera HOM05D001033 ORTHO05D005438 1.2e-13 79.3 40 100.0
Gohir.1Z049599 Gossypium hirsutum HOM05D001033 ORTHO05D005438 5.9e-13 77.0 42 92.9
Gohir.D01G102268 Gossypium hirsutum HOM05D001033 ORTHO05D005438 5.9e-13 77.0 42 92.9
Lalb_Chr03g0039391 Lupinus albus HOM05D001033 ORTHO05D005438 5.9e-13 77.0 42 90.5
Lalb_Chr07g0192301 Lupinus albus HOM05D001033 ORTHO05D005438 5.9e-13 77.0 42 90.5
SalBow1G1818 Salvia bowleyana HOM05D001033 ORTHO05D005438 5.9e-13 77.0 42 90.5
PGR111G0123 Punica granatum HOM05D001033 ORTHO05D005438 7.6e-13 76.6 42 92.9
Eucgr.A02745 Eucalyptus grandis HOM05D001033 ORTHO05D005438 1.0e-12 76.3 45 88.9
Potri.013G163000 Populus trichocarpa HOM05D001033 ORTHO05D005438 1.0e-12 76.3 42 90.5
Thhalv10010825m.g Eutrema salsugineum HOM05D001033 ORTHO05D005438 1.7e-12 75.5 42 88.1
PSO548G0108 Papaver somniferum HOM05D001033 ORTHO05D005438 1.7e-12 75.5 42 90.5
QL93p0270_0001 Quercus lobata HOM05D001033 ORTHO05D005438 2.2e-12 75.1 42 88.1
AL2G20690 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 2.9e-12 74.7 42 85.7
AL2G21100 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 2.9e-12 74.7 42 85.7
AL2G21480 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 2.9e-12 74.7 42 85.7
ATCG00440 Arabidopsis thaliana HOM05D001033 ORTHO05D005438 2.9e-12 74.7 42 85.7
Phvul.011G056516 Phaseolus vulgaris HOM05D001033 ORTHO05D005438 2.9e-12 74.7 42 88.1
VMungo0498G0001 Vigna mungo HOM05D001033 ORTHO05D005438 2.9e-12 74.7 42 88.1
BcaB02g11351 Brassica carinata HOM05D001033 ORTHO05D002045 3.8e-12 74.3 42 85.7
BcaC04g20697 Brassica carinata HOM05D001033 ORTHO05D002045 3.8e-12 74.3 42 85.7
BcaC05g28797 Brassica carinata HOM05D001033 ORTHO05D002045 3.8e-12 74.3 42 85.7
Gohir.A09G102300 Gossypium hirsutum HOM05D001033 ORTHO05D005438 3.8e-12 74.3 42 90.5
Gohir.A10G087950 Gossypium hirsutum HOM05D001033 ORTHO05D005438 3.8e-12 74.3 42 88.1
Gohir.D04G084000 Gossypium hirsutum HOM05D001033 ORTHO05D005438 3.8e-12 74.3 42 90.5
CARHR282060 Cardamine hirsuta HOM05D001033 ORTHO05D005438 5.0e-12 73.9 42 85.7
Glyma.13G068600 Glycine max HOM05D001033 ORTHO05D005438 5.0e-12 73.9 42 88.1
EL10As12g24023 Beta vulgaris HOM05D001033 ORTHO05D005438 6.5e-12 73.6 42 85.7
EL10As1g23050 Beta vulgaris HOM05D001033 ORTHO05D005438 6.5e-12 73.6 42 85.7
DCAR_032489 Daucus carota HOM05D001033 ORTHO05D005438 6.5e-12 73.6 42 85.7
BNapus_Darmor_BZH_scaffold_253p00180 Brassica napus HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BNapus_Darmor_BZH_scaffold_287p00100 Brassica napus HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
C02p43490 Brassica napus HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
C04p22580 Brassica napus HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
C09p40500 Brassica napus HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BolC7t41722H Brassica oleracea HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BolSC45t60863H Brassica oleracea HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BolSC45t60948H Brassica oleracea HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BolSC46t60995H Brassica oleracea HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BolSC46t61040H Brassica oleracea HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BolSC47t61102H Brassica oleracea HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BraSC25t45843Z Brassica rapa HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BraSC25t45872Z Brassica rapa HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BraSC58t46415Z Brassica rapa HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
BraSC59t46597Z Brassica rapa HOM05D001033 ORTHO05D005438 8.4e-12 73.2 42 85.7
Hma1.2p1_2223F.1_g317430 Hydrangea macrophylla HOM05D001033 ORTHO05D005438 1.1e-11 72.8 42 85.7
Medtr3g035740 Medicago truncatula HOM05D001033 ORTHO05D005438 1.4e-11 72.4 42 85.7
Medtr4g051245 Medicago truncatula HOM05D001033 ORTHO05D005438 1.4e-11 72.4 42 85.7
Medtr5g090760 Medicago truncatula HOM05D000680 ORTHO05D005619 1.4e-11 72.4 42 85.7
Peaxi162Scf00334g01211 Petunia axillaris HOM05D001033 ORTHO05D002045 1.9e-11 72.0 42 83.3
BolC7t41667H Brassica oleracea HOM05D001033 ORTHO05D005438 2.5e-11 71.6 42 85.7
Gohir.D02G106150 Gossypium hirsutum HOM05D001033 ORTHO05D005438 3.2e-11 71.2 47 83.0
Gorai.005G120500 Gossypium raimondii HOM05D001033 ORTHO05D005438 3.2e-11 71.2 47 83.0
RcHm_v2.0_CPg0502161 Rosa chinensis HOM05D001033 ORTHO05D005438 5.5e-11 70.5 42 83.3
CAN.G397.97 Capsicum annuum HOM05D001033 ORTHO05D005438 1.2e-10 69.3 42 81.0
CAN.G835.10 Capsicum annuum HOM05D001033 ORTHO05D005438 1.2e-10 69.3 42 81.0
EL10Ac5g11371 Beta vulgaris HOM05D001033 ORTHO05D005438 2.1e-10 68.6 42 81.0
LjContig00318g0006081 Lotus japonicus HOM05D001033 ORTHO05D005438 2.1e-10 68.6 42 83.3
Gohir.A07G060600 Gossypium hirsutum HOM05D001033 ORTHO05D005438 3.5e-10 67.8 45 80.0
HanXRQChr00c0345g0573911 Helianthus annuus HOM05D001033 ORTHO05D005438 3.5e-10 67.8 42 81.0
HanXRQChr00c0702g0576861 Helianthus annuus HOM05D001033 ORTHO05D002045 3.5e-10 67.8 42 81.0
HanXRQChr00c0759g0577221 Helianthus annuus HOM05D001033 ORTHO05D005438 3.5e-10 67.8 42 81.0
HanXRQChr02g0041511 Helianthus annuus HOM05D001033 ORTHO05D002045 3.5e-10 67.8 42 81.0
HanXRQChr02g0044941 Helianthus annuus HOM05D001033 ORTHO05D002045 3.5e-10 67.8 42 81.0
HanXRQChr07g0201001 Helianthus annuus HOM05D001033 ORTHO05D002045 3.5e-10 67.8 42 81.0
HanXRQChr08g0210311 Helianthus annuus HOM05D001033 ORTHO05D002045 3.5e-10 67.8 42 81.0
HanXRQChr10g0283501 Helianthus annuus HOM05D001033 ORTHO05D002045 3.5e-10 67.8 42 81.0
HanXRQChr10g0289221 Helianthus annuus HOM05D001033 ORTHO05D002045 3.5e-10 67.8 42 81.0
HanXRQChr11g0326771 Helianthus annuus HOM05D001033 ORTHO05D002045 3.5e-10 67.8 42 81.0
HanXRQChr11g0348981 Helianthus annuus HOM05D001033 ORTHO05D005438 3.5e-10 67.8 42 81.0
HanXRQChr14g0454411 Helianthus annuus HOM05D001033 ORTHO05D005438 3.5e-10 67.8 42 81.0
HanXRQCPg0579981 Helianthus annuus HOM05D001033 ORTHO05D002045 3.5e-10 67.8 42 81.0
Nitab4.5_0002149g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.9e-08 62.0 42 76.2
Gohir.D05G268250 Gossypium hirsutum HOM05D001033 ORTHO05D005438 2.5e-08 61.6 41 78.0
Oeu028781.1 Olea europaea HOM05D001033 ORTHO05D005438 3.3e-08 61.2 42 76.2
Gorai.009G280700 Gossypium raimondii HOM05D001033 ORTHO05D005438 5.7e-08 60.5 41 75.6
Medtr7g076390 Medicago truncatula HOM05D001033 ORTHO05D005438 6.3e-07 57.0 42 69.0
BolSC47t61122H Brassica oleracea HOM05D001033 ORTHO05D005438 1.1e-06 56.2 37 75.7
BolSC29t60584H Brassica oleracea HOM05D001033 ORTHO05D005438 3.1e-06 54.7 39 71.8


User provided reference genes

Program Settings