Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.7e-66 253.8 124 100.0
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.7e-66 253.8 124 100.0
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.7e-66 253.8 124 100.0
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 6.7e-66 253.8 124 100.0
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 3.4e-54 214.9 117 89.7
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 2.1e-51 205.7 124 86.3
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 4.5e-46 188.0 124 79.8
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 4.5e-46 188.0 124 79.8
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 4.5e-46 188.0 124 79.8
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 1.0e-45 186.8 102 88.2
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.0e-45 186.8 102 88.2
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 3.8e-45 184.9 124 79.8
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 3.2e-44 181.8 102 85.3
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 3.2e-44 181.8 124 76.6
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 7.2e-44 180.6 123 76.4
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.1e-43 179.1 123 76.4
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 2.1e-43 179.1 124 76.6
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 4.6e-43 177.9 124 76.6
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 3.3e-41 171.8 104 83.7
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.2e-38 163.3 121 68.6
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 1.0e-37 160.2 124 71.8
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 3.8e-37 158.3 98 80.6
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 2.5e-36 155.6 102 76.5
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.5e-36 155.6 118 70.3
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.0e-34 150.2 102 75.5
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 3.9e-34 148.3 105 72.4
MBI08_g48227_MAGBIO Magnolia biondii HOM05D007952 ORTHO05D009823 5.1e-34 147.9 74 97.3
Peaxi162Scf00987g00215 Petunia axillaris HOM05D007952 ORTHO05D009823 5.1e-34 147.9 74 97.3
unitig_87.g27919 Utricularia gibba HOM05D007952 ORTHO05D009823 5.1e-34 147.9 74 97.3
unitig_87.g28035 Utricularia gibba HOM05D007952 ORTHO05D009823 5.1e-34 147.9 74 97.3
unitig_91.g26519 Utricularia gibba HOM05D007952 ORTHO05D009823 5.1e-34 147.9 74 97.3
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 8.8e-34 147.1 72 98.6
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 2.0e-33 146.0 112 70.5
Lj2C1239G84 Lonicera japonica HOM05D007952 ORTHO05D009823 4.4e-33 144.8 75 96.0
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 1.3e-32 143.3 102 73.5
EL10As10g23962 Beta vulgaris HOM05D007952 ORTHO05D009823 1.3e-32 143.3 74 95.9
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 1.4e-31 139.8 68 97.1
Atru.chr9.365 Acer truncatum HOM05D007952 ORTHO05D009823 1.8e-31 139.4 73 93.2
SEGI_08440 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.1e-31 138.3 90 82.2
SEGI_09919 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.1e-31 138.3 90 82.2
SEGI_21867 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.1e-31 138.3 90 82.2
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 2.6e-30 135.6 93 73.1
Sc23g0003910 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.9e-29 132.1 95 75.8
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 6.5e-29 131.0 93 73.1
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 2.7e-27 125.6 102 64.7
Nn6g32821 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.7e-27 124.8 61 98.4
Nn6g32826 Nelumbo nucifera HOM05D007952 ORTHO05D009823 4.7e-27 124.8 61 98.4
SEGI_38349 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 8.0e-27 124.0 73 86.3
Nitab4.5_0004552g0010 Nicotiana tabacum HOM05D000796 ORTHO05D009823 6.7e-26 120.9 109 62.4
Nn6g33130 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.2e-24 115.9 56 100.0
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 3.7e-24 115.2 57 93.0
Hma1.2p1_0594F.1_g185798 Hydrangea macrophylla HOM05D007952 ORTHO05D009823 8.2e-24 114.0 56 96.4
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 4.1e-23 111.7 115 55.7
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 9.1e-23 110.5 67 79.1
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 2.7e-22 109.0 76 73.7
Nitab4.5_0007400g0010 Nicotiana tabacum HOM05D007952 ORTHO05D009823 3.2e-20 102.1 76 69.7
Psat0ss8367g0160 Pisum sativum HOM05D001387 ORTHO05D001250 2.7e-19 99.0 98 55.1
arahy.Tifrunner.gnm1.ann1.9E5EUV Arachis hypogaea HOM05D000388 ORTHO05D000473 5.2e-18 94.7 67 71.6
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 1.2e-17 93.6 90 57.8
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 2.6e-17 92.4 76 65.8
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 4.4e-17 91.7 68 73.5
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 5.7e-17 91.3 89 57.3
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 5.7e-17 91.3 85 60.0
Potri.005G037850 Populus trichocarpa HOM05D007952 ORTHO05D009823 6.3e-16 87.8 57 77.2
Oeu000007.1 Olea europaea HOM05D007952 ORTHO05D009823 1.8e-15 86.3 83 54.2
CBR_g12953 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-15 85.5 55 74.5
BcaC04g20704 Brassica carinata HOM05D007952 ORTHO05D009823 2.0e-14 82.8 39 94.9
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.2e-13 79.3 65 64.6
CAN.G1186.47 Capsicum annuum HOM05D007952 ORTHO05D009823 2.9e-13 79.0 80 55.0
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 6.5e-13 77.8 84 50.0
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 8.5e-13 77.4 78 53.8
SEGI_35056 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 8.5e-13 77.4 49 79.6
Nn031s41604 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.5e-12 76.6 35 100.0
Nn233s45560 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.5e-12 76.6 35 100.0
Nn241s45689 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.5e-12 76.6 35 100.0
Nn6g33131 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.5e-12 76.6 35 100.0
Nn6g33484 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.5e-12 76.6 35 100.0
SEGI_02200 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 1.5e-12 76.6 56 67.9
arahy.Tifrunner.gnm1.ann1.60YYL0 Arachis hypogaea HOM05D010190 ORTHO05D009823 2.5e-12 75.9 128 42.2
Nitab4.5_0007025g0020 Nicotiana tabacum HOM05D001226 ORTHO05D009823 9.4e-12 73.9 55 69.1
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 1.2e-11 73.6 35 97.1
Phvul.009G038333 Phaseolus vulgaris HOM05D007952 ORTHO05D009823 1.2e-11 73.6 35 97.1
BolSC91t61267H Brassica oleracea HOM05D007952 ORTHO05D009823 1.6e-11 73.2 52 78.8
Nn1g08228 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.1e-11 72.8 35 94.3
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 2.0e-09 66.2 79 51.9
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 5.7e-09 64.7 43 76.7
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 5.7e-09 64.7 43 76.7
ECA236G0169 Erigeron canadensis HOM05D000353 ORTHO05D000174 2.8e-08 62.4 33 90.9
Atru.chr9.2550 Acer truncatum HOM05D010190 ORTHO05D009823 8.3e-08 60.8 43 69.8
Oeu011728.3 Olea europaea HOM05D002681 ORTHO05D003372 8.3e-08 60.8 29 96.6
Medtr3g028290 Medicago truncatula HOM05D007952 ORTHO05D009823 1.4e-07 60.1 30 90.0
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 1.4e-07 60.1 43 72.1
BolC6t36075H Brassica oleracea HOM05D000963 ORTHO05D009823 4.1e-07 58.5 31 80.6
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 9.2e-07 57.4 32 81.2
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 9.2e-07 57.4 146 33.6
CAN.G8.21 Capsicum annuum HOM05D000580 ORTHO05D001362 7.7e-06 54.3 80 40.0


User provided reference genes

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