Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn021s41529 Nelumbo nucifera HOM05D007792 ORTHO05D009931 5.0e-58 227.6 121 100.0
Oeu028775.1 Olea europaea HOM05D007792 ORTHO05D009931 1.2e-51 206.5 120 91.7
Oeu058366.1 Olea europaea HOM05D007792 ORTHO05D009931 1.2e-51 206.5 120 91.7
PSO548G0123 Papaver somniferum HOM05D007792 ORTHO05D009931 3.5e-51 204.9 121 90.9
SalBow1G1024 Salvia bowleyana HOM05D007792 ORTHO05D009931 1.9e-49 199.1 118 89.8
HanXRQChr01g0020291 Helianthus annuus HOM05D007792 ORTHO05D009931 4.7e-48 194.5 120 86.7
HanXRQChr04g0094291 Helianthus annuus HOM05D007792 ORTHO05D009931 4.7e-48 194.5 120 86.7
HanXRQChr10g0283611 Helianthus annuus HOM05D007792 ORTHO05D009931 4.7e-48 194.5 120 86.7
HanXRQChr10g0284301 Helianthus annuus HOM05D007792 ORTHO05D009931 4.7e-48 194.5 120 86.7
HanXRQChr10g0318141 Helianthus annuus HOM05D007792 ORTHO05D009931 4.7e-48 194.5 120 86.7
HanXRQChr11g0326891 Helianthus annuus HOM05D007792 ORTHO05D009931 4.7e-48 194.5 120 86.7
HanXRQCPg0580101 Helianthus annuus HOM05D007792 ORTHO05D009931 4.7e-48 194.5 120 86.7
HanXRQChr04g0095111 Helianthus annuus HOM05D007792 ORTHO05D009931 6.1e-48 194.1 120 85.8
DCAR_032507 Daucus carota HOM05D007792 ORTHO05D009931 1.0e-47 193.4 120 86.7
Sed0026344 Sechium edule HOM05D007792 ORTHO05D009931 1.0e-47 193.4 121 86.0
Sed0027103 Sechium edule HOM05D007792 ORTHO05D009931 1.0e-47 193.4 121 86.0
PGR111G0084 Punica granatum HOM05D007792 ORTHO05D009931 1.8e-47 192.6 119 86.6
RcHm_v2.0_CPg0502001 Rosa chinensis HOM05D007792 ORTHO05D009931 1.8e-47 192.6 121 85.1
MELO3C027088.2 Cucumis melo HOM05D007792 ORTHO05D009931 3.0e-47 191.8 120 85.0
Nn6g32081 Nelumbo nucifera HOM05D007792 ORTHO05D009931 3.0e-47 191.8 105 97.1
Gohir.A12G229400 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.6e-46 188.7 121 84.3
Gohir.D01G101995 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.6e-46 188.7 121 85.1
HanXRQChr02g0052571 Helianthus annuus HOM05D007792 ORTHO05D009931 5.7e-46 187.6 120 84.2
CAN.G1148.9 Capsicum annuum HOM05D007792 ORTHO05D009931 1.1e-44 183.3 118 83.1
CAN.G2018.13 Capsicum annuum HOM05D007792 ORTHO05D009931 1.1e-44 183.3 118 83.1
CAN.G438.83 Capsicum annuum HOM05D007792 ORTHO05D009931 1.1e-44 183.3 118 83.1
Sed0001088 Sechium edule HOM05D007792 ORTHO05D009931 1.1e-44 183.3 121 84.3
CARHR282170 Cardamine hirsuta HOM05D007792 ORTHO05D009931 1.4e-44 183.0 121 80.2
AL2G21630 Arabidopsis lyrata HOM05D007792 ORTHO05D009931 4.1e-44 181.4 121 79.3
ATCG00660 Arabidopsis thaliana HOM05D007792 ORTHO05D009931 5.4e-44 181.0 121 79.3
Oeu053978.1 Olea europaea HOM05D007792 ORTHO05D009931 5.4e-44 181.0 108 90.7
BNapus_Darmor_BZH_scaffold_287p00200 Brassica napus HOM05D007792 ORTHO05D009931 1.0e-42 176.8 121 78.5
C02p43590 Brassica napus HOM05D007792 ORTHO05D009931 1.0e-42 176.8 121 78.5
C06p22950 Brassica napus HOM05D007792 ORTHO05D009931 1.0e-42 176.8 121 78.5
BolSC29t60598H Brassica oleracea HOM05D007792 ORTHO05D009931 1.0e-42 176.8 121 78.5
BolSC47t61086H Brassica oleracea HOM05D007792 ORTHO05D009931 1.0e-42 176.8 121 78.5
BraSC138t45565Z Brassica rapa HOM05D007792 ORTHO05D009931 1.0e-42 176.8 121 78.5
BraSC25t45855Z Brassica rapa HOM05D007792 ORTHO05D009931 1.0e-42 176.8 121 78.5
BraSC58t46432Z Brassica rapa HOM05D007792 ORTHO05D009931 1.0e-42 176.8 121 78.5
MELO3C028023.2 Cucumis melo HOM05D007792 ORTHO05D009931 2.2e-42 175.6 112 83.0
Phvul.002G090500 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 5.5e-41 171.0 120 76.7
BolC6t36199H Brassica oleracea HOM05D007792 ORTHO05D009931 1.0e-39 166.8 121 74.4
BraSC58t46493Z Brassica rapa HOM05D007792 ORTHO05D009931 4.0e-39 164.9 122 74.6
Gohir.D09G044333 Gossypium hirsutum HOM05D007792 ORTHO05D009931 4.0e-39 164.9 106 84.0
LjContig00318g0025275 Lotus japonicus HOM05D007792 ORTHO05D009931 1.2e-38 163.3 120 70.8
Glyma.12G232100 Glycine max HOM05D007792 ORTHO05D009931 1.5e-38 162.9 120 72.5
Gohir.A11G230404 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.0e-38 162.5 106 83.0
Lalb_Chr07g0192061 Lupinus albus HOM05D007792 ORTHO05D009931 5.7e-38 161.0 119 70.6
Lalb_Chr08g0237911 Lupinus albus HOM05D007792 ORTHO05D009931 5.7e-38 161.0 119 70.6
Gohir.A02G053101 Gossypium hirsutum HOM05D007792 ORTHO05D009931 9.8e-38 160.2 117 73.5
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 3.1e-36 155.2 119 73.9
MELO3C028123.2 Cucumis melo HOM05D007792 ORTHO05D009931 9.2e-36 153.7 98 81.6
Medtr4g034720 Medicago truncatula HOM05D007792 ORTHO05D009931 1.0e-34 150.2 121 66.1
BolSC29t60477H Brassica oleracea HOM05D007792 ORTHO05D009931 1.5e-33 146.4 98 79.6
Gorai.012G094800 Gossypium raimondii HOM05D007792 ORTHO05D009931 2.5e-33 145.6 103 76.7
Gohir.D04G084960 Gossypium hirsutum HOM05D007792 ORTHO05D009931 3.3e-33 145.2 103 76.7
Gorai.011G046100 Gossypium raimondii HOM05D007792 ORTHO05D009931 3.3e-33 145.2 106 75.5
Solyc00g180440.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 5.6e-33 144.4 87 88.5
Solyc11g063720.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.0e-31 140.2 89 83.1
Sed0005117 Sechium edule HOM05D007792 ORTHO05D009931 5.2e-31 137.9 121 66.9
Solyc11g063660.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 8.9e-31 137.1 89 80.9
Solyc11g063440.3 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.2e-30 136.7 89 82.0
Lalb_Chr23g0274331 Lupinus albus HOM05D007792 ORTHO05D009931 1.7e-29 132.9 105 70.5
BolC2t08921H Brassica oleracea HOM05D007792 ORTHO05D009931 1.1e-28 130.2 96 74.0
Nitab4.5_0007104g0100 Nicotiana tabacum HOM05D007792 ORTHO05D009931 5.4e-28 127.9 82 80.5
Gohir.D01G169022 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.6e-27 126.3 98 71.4
BolC8t52434H Brassica oleracea HOM05D007792 ORTHO05D009931 3.5e-27 125.2 121 61.2
Glyma.01G201700 Glycine max HOM05D007792 ORTHO05D009931 1.0e-26 123.6 120 58.3
Gorai.002G210300 Gossypium raimondii HOM05D007792 ORTHO05D009931 1.3e-26 123.2 92 71.7
Sc09g0009720 Simmondsia chinensis HOM05D007792 ORTHO05D001488 5.0e-26 121.3 71 87.3
Gorai.001G063300 Gossypium raimondii HOM05D007792 ORTHO05D009931 3.3e-25 118.6 103 65.0
Duzib071G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 9.5e-25 117.1 85 75.3
Duzib233G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 9.5e-25 117.1 85 75.3
Duzib237G0004 Durio zibethinus HOM05D000274 ORTHO05D002552 9.5e-25 117.1 85 75.3
Duzib253G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 9.5e-25 117.1 85 75.3
Medtr7g085940 Medicago truncatula HOM05D007792 ORTHO05D009931 9.5e-25 117.1 93 65.6
Sc22g0003450 Simmondsia chinensis HOM05D002194 ORTHO05D002840 1.6e-24 116.3 85 72.9
Aqoxy2G00943 Aquilegia oxysepala HOM05D007792 ORTHO05D009931 2.8e-24 115.5 71 84.5
C04p42970 Brassica napus HOM05D007792 ORTHO05D009931 4.7e-24 114.8 82 76.8
CARHR287410 Cardamine hirsuta HOM05D007792 ORTHO05D009931 8.0e-24 114.0 89 70.8
arahy.Tifrunner.gnm1.ann1.H056B9 Arachis hypogaea HOM05D007792 ORTHO05D009931 4.0e-23 111.7 119 55.5
arahy.Tifrunner.gnm1.ann1.4Z8JUD Arachis hypogaea HOM05D007792 ORTHO05D009931 1.5e-22 109.8 94 61.7
arahy.Tifrunner.gnm1.ann1.81C611 Arachis hypogaea HOM05D007792 ORTHO05D009931 3.7e-21 105.1 119 52.1
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 1.5e-17 93.2 70 71.4
Gohir.A10G134900 Gossypium hirsutum HOM05D007792 ORTHO05D009931 3.3e-17 92.0 121 50.4
MD11G1294300 Malus domestica HOM05D007792 ORTHO05D009931 8.3e-13 77.4 42 97.6
Eucgr.D02558 Eucalyptus grandis HOM05D007792 ORTHO05D009931 9.2e-12 73.9 59 71.2
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 1.7e-10 69.7 56 64.3
CiPaw.07G076700 Carya illinoinensis HOM05D007792 ORTHO05D009931 1.1e-09 67.0 69 50.7
Phvul.004G105000 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 1.1e-09 67.0 100 46.0
EL10Ac4g08243 Beta vulgaris HOM05D007792 ORTHO05D009931 4.3e-09 65.1 96 50.0
PRCOL_00003603 Prasinoderma coloniale HOM05D004456 ORTHO05D005287 2.3e-07 59.3 91 41.8
Haze_16244 Corylus avellana HOM05D004456 ORTHO05D005287 1.5e-06 56.6 92 38.0
TWI60G0757 Tripterygium wilfordii HOM05D004456 ORTHO05D005287 5.8e-06 54.7 92 34.8
CiPaw.01G092700 Carya illinoinensis HOM05D004456 ORTHO05D005287 7.6e-06 54.3 92 37.0
MD08G1155000 Malus domestica HOM05D007792 ORTHO05D009931 9.9e-06 53.9 33 75.8
SMO358G0062 Selaginella moellendorffii HOM05D004456 ORTHO05D005287 9.9e-06 53.9 103 35.9
Hund17691 Selenicereus undatus HOM05D004456 ORTHO05D005287 9.9e-06 53.9 92 37.0


User provided reference genes

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